RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 SREBF1P36956 1147 aa11.88□□□□□ -0.51
VIPAS39-203ENST00000448935 GSDMDP57764 484 aa11.88□□□□□ -0.51
VIPAS39-203ENST00000448935 ARHGAP4P98171 946 aa11.88□□□□□ -0.51
VIPAS39-203ENST00000448935 ZNF658Q5TYW1 1059 aaPredicted RBP11.88□□□□□ -0.51
VIPAS39-203ENST00000448935 KIFC2Q96AC6 838 aa11.88□□□□□ -0.51
VIPAS39-203ENST00000448935 MBOAT7Q96N66 472 aa11.88□□□□□ -0.51
VIPAS39-203ENST00000448935 TTC12Q9H892 705 aaPredicted RBP11.88□□□□□ -0.51
VIPAS39-203ENST00000448935 PCDHA12Q9UN75 941 aa11.88□□□□□ -0.51
VIPAS39-203ENST00000448935 KDM3AQ9Y4C1 1321 aa11.88□□□□□ -0.51
VIPAS39-203ENST00000448935 PP2D1A8MPX8 630 aa11.87□□□□□ -0.51
VIPAS39-203ENST00000448935 SERPINC1P01008 464 aa11.87□□□□□ -0.51
VIPAS39-203ENST00000448935 CYP3A4P08684 503 aa11.87□□□□□ -0.51
VIPAS39-203ENST00000448935 PLCG1P19174 1290 aa11.87□□□□□ -0.51
VIPAS39-203ENST00000448935 LMOD1P29536 600 aaPredicted RBP11.87□□□□□ -0.51
VIPAS39-203ENST00000448935 FANCCQ00597 558 aa11.87□□□□□ -0.51
VIPAS39-203ENST00000448935 STIM1Q13586 685 aa11.87□□□□□ -0.51
VIPAS39-203ENST00000448935 CUL4BQ13620 913 aa11.87□□□□□ -0.51
VIPAS39-203ENST00000448935 ZYXQ15942 572 aaKnown RBP11.87□□□□□ -0.51
VIPAS39-203ENST00000448935 Q4G0T1 1027 aa11.87□□□□□ -0.51
VIPAS39-203ENST00000448935 NAALADL2Q58DX5 795 aa11.87□□□□□ -0.51
VIPAS39-203ENST00000448935 KIAA1755Q5JYT7 1200 aa11.87□□□□□ -0.51
VIPAS39-203ENST00000448935 SCYL3Q8IZE3 742 aa11.87□□□□□ -0.51
VIPAS39-203ENST00000448935 SAMD3Q8N6K7 520 aa11.87□□□□□ -0.51
VIPAS39-203ENST00000448935 PRPF38AQ8NAV1 312 aaKnown RBP11.87□□□□□ -0.51
VIPAS39-203ENST00000448935 NT5C3AQ9H0P0 336 aa11.87□□□□□ -0.51
VIPAS39-203ENST00000448935 RABGAP1Q9Y3P9 1069 aa11.87□□□□□ -0.51
VIPAS39-203ENST00000448935 GCOM1H8Y6P7 765 aaPredicted RBP11.86□□□□□ -0.51
VIPAS39-203ENST00000448935 EDIL3O43854 480 aa11.86□□□□□ -0.51
VIPAS39-203ENST00000448935 POLR2MP0CAP2 368 aa11.86□□□□□ -0.51
VIPAS39-203ENST00000448935 CDK11BP21127 795 aaKnown RBP11.86□□□□□ -0.51
VIPAS39-203ENST00000448935 CIITAP33076 1130 aa11.86□□□□□ -0.51
VIPAS39-203ENST00000448935 UBASH3AP57075 661 aa11.86□□□□□ -0.51
VIPAS39-203ENST00000448935 SNAP25P60880 206 aa11.86□□□□□ -0.51
VIPAS39-203ENST00000448935 SUPT20HL1Q3ZLR7 823 aa11.86□□□□□ -0.51
VIPAS39-203ENST00000448935 IER5LQ5T953 404 aa11.86□□□□□ -0.51
VIPAS39-203ENST00000448935 ANGEL2Q5VTE6 544 aaKnown RBP11.86□□□□□ -0.51
VIPAS39-203ENST00000448935 SPATA1Q5VX52 437 aa11.86□□□□□ -0.51
VIPAS39-203ENST00000448935 SV2BQ7L1I2 683 aa11.86□□□□□ -0.51
VIPAS39-203ENST00000448935 CCDC186Q7Z3E2 898 aa11.86□□□□□ -0.51
VIPAS39-203ENST00000448935 SNX29Q8TEQ0 813 aa11.86□□□□□ -0.51
VIPAS39-203ENST00000448935 CRYGNQ8WXF5 182 aa11.86□□□□□ -0.51
VIPAS39-203ENST00000448935 FAM20AQ96MK3 541 aa11.86□□□□□ -0.51
VIPAS39-203ENST00000448935 MTRQ99707 1265 aa11.86□□□□□ -0.51
VIPAS39-203ENST00000448935 C7orf25Q9BPX7 421 aa11.86□□□□□ -0.51
VIPAS39-203ENST00000448935 SLF1Q9BQI6 1058 aa11.86□□□□□ -0.51
VIPAS39-203ENST00000448935 WDR18Q9BV38 432 aa11.86□□□□□ -0.51
VIPAS39-203ENST00000448935 XPO4Q9C0E2 1151 aaKnown RBP11.86□□□□□ -0.51
VIPAS39-203ENST00000448935 BLZF1Q9H2G9 400 aa11.86□□□□□ -0.51
VIPAS39-203ENST00000448935 PICK1Q9NRD5 415 aa11.86□□□□□ -0.51
VIPAS39-203ENST00000448935 FANCLQ9NW38 375 aa11.86□□□□□ -0.51
VIPAS39-203ENST00000448935 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.86□□□□□ -0.51
VIPAS39-203ENST00000448935 IFNKQ9P0W0 207 aa11.86□□□□□ -0.51
VIPAS39-203ENST00000448935 ZNF112Q9UJU3 913 aa11.86□□□□□ -0.51
VIPAS39-203ENST00000448935 NFE2L3Q9Y4A8 694 aa11.86□□□□□ -0.51
VIPAS39-203ENST00000448935 PITPNM2Q9BZ72 1349 aa11.86□□□□□ -0.51
VIPAS39-203ENST00000448935 SYNRGQ9UMZ2 1314 aa11.86□□□□□ -0.51
VIPAS39-203ENST00000448935 NRDCO43847 1150 aa11.86□□□□□ -0.51
VIPAS39-203ENST00000448935 RHOBTB3O94955 611 aa11.86□□□□□ -0.51
VIPAS39-203ENST00000448935 ICAM1P05362 532 aa11.86□□□□□ -0.51
VIPAS39-203ENST00000448935 NBPF12Q5TAG4 269 aaPredicted RBP11.86□□□□□ -0.51
VIPAS39-203ENST00000448935 HAUS3Q68CZ6 603 aa11.86□□□□□ -0.51
VIPAS39-203ENST00000448935 CCDC174Q6PII3 467 aa11.86□□□□□ -0.51
VIPAS39-203ENST00000448935 MCF2L2Q86YR7 1114 aa11.86□□□□□ -0.51
VIPAS39-203ENST00000448935 ERMNQ8TAM6 284 aa11.86□□□□□ -0.51
VIPAS39-203ENST00000448935 STAMQ92783 540 aa11.86□□□□□ -0.51
VIPAS39-203ENST00000448935 MMTAG2Q9BU76 263 aaKnown RBP11.86□□□□□ -0.51
VIPAS39-203ENST00000448935 FHDC1Q9C0D6 1143 aaPredicted RBP11.86□□□□□ -0.51
VIPAS39-203ENST00000448935 KCNMB3Q9NPA1 279 aa11.86□□□□□ -0.51
VIPAS39-203ENST00000448935 PTGS1P23219 599 aa11.85□□□□□ -0.51
VIPAS39-203ENST00000448935 ZNF76P36508 570 aa11.85□□□□□ -0.51
VIPAS39-203ENST00000448935 ATN1P54259 1190 aaPredicted RBP11.85□□□□□ -0.51
VIPAS39-203ENST00000448935 PAK1Q13153 545 aa11.85□□□□□ -0.51
VIPAS39-203ENST00000448935 TPD52L1Q16890 204 aaPredicted RBP11.85□□□□□ -0.51
VIPAS39-203ENST00000448935 HYIQ5T013 277 aa11.85□□□□□ -0.51
VIPAS39-203ENST00000448935 KCTD17Q8N5Z5 321 aa11.85□□□□□ -0.51
VIPAS39-203ENST00000448935 HAS1Q92839 578 aa11.85□□□□□ -0.51
VIPAS39-203ENST00000448935 CTAGE1Q96RT6 745 aa11.85□□□□□ -0.51
VIPAS39-203ENST00000448935 HSD3B7Q9H2F3 369 aa11.85□□□□□ -0.51
VIPAS39-203ENST00000448935 MAP3K20Q9NYL2 800 aaKnown RBP11.85□□□□□ -0.51
VIPAS39-203ENST00000448935 RWDD2AQ9UIY3 292 aa11.85□□□□□ -0.51
VIPAS39-203ENST00000448935 CTDP1Q9Y5B0 961 aaPredicted RBP11.85□□□□□ -0.51
VIPAS39-203ENST00000448935 PVALEFA0A1B0GWK0 134 aa11.84□□□□□ -0.51
VIPAS39-203ENST00000448935 PPP1R3GB7ZBB8 358 aa11.84□□□□□ -0.51
VIPAS39-203ENST00000448935 C19orf81C9J6K1 198 aa11.84□□□□□ -0.51
VIPAS39-203ENST00000448935 OPLAHO14841 1288 aa11.84□□□□□ -0.51
VIPAS39-203ENST00000448935 CFBP00751 764 aa11.84□□□□□ -0.51
VIPAS39-203ENST00000448935 ZNF18P17022 549 aa11.84□□□□□ -0.51
VIPAS39-203ENST00000448935 CASP1P29466 404 aa11.84□□□□□ -0.51
VIPAS39-203ENST00000448935 FMR1Q06787 632 aaKnown RBP eCLIP11.84□□□□□ -0.51
VIPAS39-203ENST00000448935 SPAG1Q07617 926 aa11.84□□□□□ -0.51
VIPAS39-203ENST00000448935 GRB10Q13322 594 aa11.84□□□□□ -0.51
VIPAS39-203ENST00000448935 TMEM119Q4V9L6 283 aa11.84□□□□□ -0.51
VIPAS39-203ENST00000448935 CNNM4Q6P4Q7 775 aa11.84□□□□□ -0.51
VIPAS39-203ENST00000448935 LDHDQ86WU2 507 aa11.84□□□□□ -0.51
VIPAS39-203ENST00000448935 CCDC150Q8NCX0 1101 aa11.84□□□□□ -0.51
VIPAS39-203ENST00000448935 ANKRD20A12PQ8NF67 263 aa11.84□□□□□ -0.51
VIPAS39-203ENST00000448935 LARP4BQ92615 738 aaKnown RBP11.84□□□□□ -0.51
VIPAS39-203ENST00000448935 WRNIP1Q96S55 665 aa11.84□□□□□ -0.51
VIPAS39-203ENST00000448935 PLIN2Q99541 437 aa11.84□□□□□ -0.51
VIPAS39-203ENST00000448935 TMUB1Q9BVT8 246 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms