RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 BTBD18B2RXH4 712 aa8.64□□□□□ -1.03
AC004540.1-206ENST00000448056 M0R2N6 131 aa8.64□□□□□ -1.03
AC004540.1-206ENST00000448056 FOSP01100 380 aaPredicted RBP8.64□□□□□ -1.03
AC004540.1-206ENST00000448056 MMP1P03956 469 aa8.64□□□□□ -1.03
AC004540.1-206ENST00000448056 PRKCSHP14314 528 aaPredicted RBP8.64□□□□□ -1.03
AC004540.1-206ENST00000448056 CYP2B6P20813 491 aa8.64□□□□□ -1.03
AC004540.1-206ENST00000448056 PDCP20941 246 aa8.64□□□□□ -1.03
AC004540.1-206ENST00000448056 RGS2P41220 211 aa8.64□□□□□ -1.03
AC004540.1-206ENST00000448056 GUCY1B3Q02153 619 aa8.64□□□□□ -1.03
AC004540.1-206ENST00000448056 PRKCZQ05513 592 aa8.64□□□□□ -1.03
AC004540.1-206ENST00000448056 MCTP2Q6DN12 878 aa8.64□□□□□ -1.03
AC004540.1-206ENST00000448056 OTOP1Q7RTM1 612 aa8.64□□□□□ -1.03
AC004540.1-206ENST00000448056 FCHSD1Q86WN1 690 aa8.64□□□□□ -1.03
AC004540.1-206ENST00000448056 DNERQ8NFT8 737 aa8.64□□□□□ -1.03
AC004540.1-206ENST00000448056 NPLOC4Q8TAT6 608 aa8.64□□□□□ -1.03
AC004540.1-206ENST00000448056 NSUN6Q8TEA1 469 aaKnown RBP8.64□□□□□ -1.03
AC004540.1-206ENST00000448056 SOCS4Q8WXH5 440 aa8.64□□□□□ -1.03
AC004540.1-206ENST00000448056 MARVELD3Q96A59 401 aa8.64□□□□□ -1.03
AC004540.1-206ENST00000448056 RMDN3Q96TC7 470 aa8.64□□□□□ -1.03
AC004540.1-206ENST00000448056 ADAM33Q9BZ11 813 aa8.64□□□□□ -1.03
AC004540.1-206ENST00000448056 TMEM260Q9NX78 707 aa8.64□□□□□ -1.03
AC004540.1-206ENST00000448056 DAXXQ9UER7 740 aaPredicted RBP8.64□□□□□ -1.03
AC004540.1-206ENST00000448056 PCDHA6Q9UN73 950 aa8.64□□□□□ -1.03
AC004540.1-206ENST00000448056 PCDHA8Q9Y5H6 950 aa8.64□□□□□ -1.03
AC004540.1-206ENST00000448056 SPDYE3A6NKU9 549 aa8.63□□□□□ -1.03
AC004540.1-206ENST00000448056 H3BQV1 296 aa8.63□□□□□ -1.03
AC004540.1-206ENST00000448056 SYT1P21579 422 aa8.63□□□□□ -1.03
AC004540.1-206ENST00000448056 KRT2P35908 639 aa8.63□□□□□ -1.03
AC004540.1-206ENST00000448056 PRMT2P55345 433 aa8.63□□□□□ -1.03
AC004540.1-206ENST00000448056 IRF5Q13568 498 aa8.63□□□□□ -1.03
AC004540.1-206ENST00000448056 SAFBQ15424 915 aaKnown RBP eCLIP8.63□□□□□ -1.03
AC004540.1-206ENST00000448056 C6orf132Q5T0Z8 1188 aa8.63□□□□□ -1.03
AC004540.1-206ENST00000448056 ARHGEF16Q5VV41 709 aa8.63□□□□□ -1.03
AC004540.1-206ENST00000448056 JAKMIP3Q5VZ66 844 aa8.63□□□□□ -1.03
AC004540.1-206ENST00000448056 MAMDC4Q6UXC1 1216 aa8.63□□□□□ -1.03
AC004540.1-206ENST00000448056 DIS3L2Q8IYB7 885 aaKnown RBP8.63□□□□□ -1.03
AC004540.1-206ENST00000448056 REXO1Q8N1G1 1221 aaKnown RBP8.63□□□□□ -1.03
AC004540.1-206ENST00000448056 RASGRP4Q8TDF6 673 aa8.63□□□□□ -1.03
AC004540.1-206ENST00000448056 TNFRSF25Q93038 417 aa8.63□□□□□ -1.03
AC004540.1-206ENST00000448056 MAML3Q96JK9 1138 aa8.63□□□□□ -1.03
AC004540.1-206ENST00000448056 FGD4Q96M96 766 aa8.63□□□□□ -1.03
AC004540.1-206ENST00000448056 IWS1Q96ST2 819 aa8.63□□□□□ -1.03
AC004540.1-206ENST00000448056 BRMS1Q9HCU9 246 aa8.63□□□□□ -1.03
AC004540.1-206ENST00000448056 NPDC1Q9NQX5 325 aaPredicted RBP8.63□□□□□ -1.03
AC004540.1-206ENST00000448056 PXMP2Q9NR77 195 aa8.63□□□□□ -1.03
AC004540.1-206ENST00000448056 ADD3Q9UEY8 706 aaKnown RBP8.63□□□□□ -1.03
AC004540.1-206ENST00000448056 TRIM17Q9Y577 477 aa8.63□□□□□ -1.03
AC004540.1-206ENST00000448056 ASTN1O14525 1302 aa8.62□□□□□ -1.03
AC004540.1-206ENST00000448056 RPTORQ8N122 1335 aa8.62□□□□□ -1.03
AC004540.1-206ENST00000448056 LOC102724159A0A0B4J2E5 919 aa8.62□□□□□ -1.03
AC004540.1-206ENST00000448056 ASB14A6NK59 587 aa8.62□□□□□ -1.03
AC004540.1-206ENST00000448056 B4DLN1 442 aa8.62□□□□□ -1.03
AC004540.1-206ENST00000448056 STX6O43752 255 aa8.62□□□□□ -1.03
AC004540.1-206ENST00000448056 IGHA2P01877 340 aa8.62□□□□□ -1.03
AC004540.1-206ENST00000448056 PDIA4P13667 645 aaKnown RBP8.62□□□□□ -1.03
AC004540.1-206ENST00000448056 EIF2AK2P19525 551 aaKnown RBP8.62□□□□□ -1.03
AC004540.1-206ENST00000448056 U2AF2P26368 475 aaKnown RBP eCLIP8.62□□□□□ -1.03
AC004540.1-206ENST00000448056 ALDH5A1P51649 535 aaPredicted RBP8.62□□□□□ -1.03
AC004540.1-206ENST00000448056 EMP3P54852 163 aa8.62□□□□□ -1.03
AC004540.1-206ENST00000448056 NR5A1Q13285 461 aa8.62□□□□□ -1.03
AC004540.1-206ENST00000448056 AP3B2Q13367 1082 aa8.62□□□□□ -1.03
AC004540.1-206ENST00000448056 PWP2Q15269 919 aaKnown RBP8.62□□□□□ -1.03
AC004540.1-206ENST00000448056 CCL14Q16627 93 aa8.62□□□□□ -1.03
AC004540.1-206ENST00000448056 OLFML2BQ68BL8 750 aa8.62□□□□□ -1.03
AC004540.1-206ENST00000448056 KRT25Q7Z3Z0 450 aa8.62□□□□□ -1.03
AC004540.1-206ENST00000448056 CTU1Q7Z7A3 348 aaKnown RBP8.62□□□□□ -1.03
AC004540.1-206ENST00000448056 VSIG10LQ86VR7 867 aa8.62□□□□□ -1.03
AC004540.1-206ENST00000448056 GPIHBP1Q8IV16 184 aa8.62□□□□□ -1.03
AC004540.1-206ENST00000448056 TRMT44Q8IYL2 757 aaKnown RBP8.62□□□□□ -1.03
AC004540.1-206ENST00000448056 MSL3Q8N5Y2 521 aaKnown RBP8.62□□□□□ -1.03
AC004540.1-206ENST00000448056 RAET1EQ8TD07 263 aa8.62□□□□□ -1.03
AC004540.1-206ENST00000448056 MORC4Q8TE76 937 aa8.62□□□□□ -1.03
AC004540.1-206ENST00000448056 PGBD1Q96JS3 809 aa8.62□□□□□ -1.03
AC004540.1-206ENST00000448056 IPO9Q96P70 1041 aaKnown RBP8.62□□□□□ -1.03
AC004540.1-206ENST00000448056 APBA2Q99767 749 aa8.62□□□□□ -1.03
AC004540.1-206ENST00000448056 FOXP1Q9H334 677 aaPredicted RBP8.62□□□□□ -1.03
AC004540.1-206ENST00000448056 PRDM10Q9NQV6 1147 aa8.62□□□□□ -1.03
AC004540.1-206ENST00000448056 FLRT1Q9NZU1 646 aa8.62□□□□□ -1.03
AC004540.1-206ENST00000448056 PTPN22Q9Y2R2 807 aa8.62□□□□□ -1.03
AC004540.1-206ENST00000448056 FRMPD4Q14CM0 1322 aa8.61□□□□□ -1.03
AC004540.1-206ENST00000448056 GPR37O15354 613 aa8.61□□□□□ -1.03
AC004540.1-206ENST00000448056 MAP3K7O43318 606 aa8.61□□□□□ -1.03
AC004540.1-206ENST00000448056 EDIL3O43854 480 aa8.61□□□□□ -1.03
AC004540.1-206ENST00000448056 ADCY3O60266 1144 aa8.61□□□□□ -1.03
AC004540.1-206ENST00000448056 ZMYND10O75800 440 aa8.61□□□□□ -1.03
AC004540.1-206ENST00000448056 SNAI1O95863 264 aaPredicted RBP8.61□□□□□ -1.03
AC004540.1-206ENST00000448056 NR3C2P08235 984 aa8.61□□□□□ -1.03
AC004540.1-206ENST00000448056 EDNRBP24530 442 aa8.61□□□□□ -1.03
AC004540.1-206ENST00000448056 SREBF1P36956 1147 aa8.61□□□□□ -1.03
AC004540.1-206ENST00000448056 USP11P51784 963 aa8.61□□□□□ -1.03
AC004540.1-206ENST00000448056 PGM5Q15124 567 aa8.61□□□□□ -1.03
AC004540.1-206ENST00000448056 NONOQ15233 471 aaKnown RBP eCLIP8.61□□□□□ -1.03
AC004540.1-206ENST00000448056 PKN2Q16513 984 aaKnown RBP8.61□□□□□ -1.03
AC004540.1-206ENST00000448056 EARS2Q5JPH6 523 aaKnown RBP8.61□□□□□ -1.03
AC004540.1-206ENST00000448056 COL13A1Q5TAT6 717 aaPredicted RBP8.61□□□□□ -1.03
AC004540.1-206ENST00000448056 PCNX4Q63HM2 1172 aa8.61□□□□□ -1.03
AC004540.1-206ENST00000448056 MCTP1Q6DN14 999 aa8.61□□□□□ -1.03
AC004540.1-206ENST00000448056 XRRA1Q6P2D8 792 aa8.61□□□□□ -1.03
AC004540.1-206ENST00000448056 PIK3AP1Q6ZUJ8 805 aa8.61□□□□□ -1.03
AC004540.1-206ENST00000448056 NOSTRINQ8IVI9 506 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms