RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 PLIN4Q96Q06 1357 aa8.4□□□□□ -1.06
LRRC28-203ENST00000447360 H3BNC9 293 aa8.4□□□□□ -1.06
LRRC28-203ENST00000447360 PRDM1O75626 825 aa8.4□□□□□ -1.06
LRRC28-203ENST00000447360 CHGBP05060 677 aa8.4□□□□□ -1.06
LRRC28-203ENST00000447360 TSPY3P0CV98 308 aa8.4□□□□□ -1.06
LRRC28-203ENST00000447360 TSPY8P0CW00 308 aa8.4□□□□□ -1.06
LRRC28-203ENST00000447360 MCCP23508 829 aa8.4□□□□□ -1.06
LRRC28-203ENST00000447360 EDNRBP24530 442 aa8.4□□□□□ -1.06
LRRC28-203ENST00000447360 EPC2Q52LR7 807 aa8.4□□□□□ -1.06
LRRC28-203ENST00000447360 TCEAL5Q5H9L2 206 aa8.4□□□□□ -1.06
LRRC28-203ENST00000447360 RCSD1Q6JBY9 416 aa8.4□□□□□ -1.06
LRRC28-203ENST00000447360 GDF6Q6KF10 455 aaPredicted RBP8.4□□□□□ -1.06
LRRC28-203ENST00000447360 ITPRIPQ8IWB1 547 aa8.4□□□□□ -1.06
LRRC28-203ENST00000447360 STK11IPQ8N1F8 1099 aa8.4□□□□□ -1.06
LRRC28-203ENST00000447360 TET1Q8NFU7 2136 aa8.4□□□□□ -1.06
LRRC28-203ENST00000447360 PPP1R13LQ8WUF5 828 aa8.4□□□□□ -1.06
LRRC28-203ENST00000447360 DHX38Q92620 1227 aaKnown RBP8.4□□□□□ -1.06
LRRC28-203ENST00000447360 IRF2BPLQ9H1B7 796 aa8.4□□□□□ -1.06
LRRC28-203ENST00000447360 NSUN3Q9H649 340 aaKnown RBP8.4□□□□□ -1.06
LRRC28-203ENST00000447360 MUTYHQ9UIF7 546 aa8.4□□□□□ -1.06
LRRC28-203ENST00000447360 PRR12Q9ULL5 1215 aa8.4□□□□□ -1.06
LRRC28-203ENST00000447360 SCN5AQ14524 2016 aa8.4□□□□□ -1.06
LRRC28-203ENST00000447360 SCN10AQ9Y5Y9 1956 aa8.4□□□□□ -1.06
LRRC28-203ENST00000447360 MYH8P13535 1937 aa8.4□□□□□ -1.06
LRRC28-203ENST00000447360 DCHS1Q96JQ0 3298 aa8.4□□□□□ -1.07
LRRC28-203ENST00000447360 COL4A4P53420 1690 aaPredicted RBP8.4□□□□□ -1.07
LRRC28-203ENST00000447360 EMSYQ7Z589 1322 aa8.39□□□□□ -1.07
LRRC28-203ENST00000447360 B4DLN1 442 aa8.39□□□□□ -1.07
LRRC28-203ENST00000447360 GFRA3O60609 400 aa8.39□□□□□ -1.07
LRRC28-203ENST00000447360 AMHP03971 560 aa8.39□□□□□ -1.07
LRRC28-203ENST00000447360 TXNP10599 105 aaKnown RBP8.39□□□□□ -1.07
LRRC28-203ENST00000447360 GNAT2P19087 354 aa8.39□□□□□ -1.07
LRRC28-203ENST00000447360 LTBRP36941 435 aa8.39□□□□□ -1.07
LRRC28-203ENST00000447360 MRPL12P52815 198 aaKnown RBP8.39□□□□□ -1.07
LRRC28-203ENST00000447360 PDE4BQ07343 736 aa8.39□□□□□ -1.07
LRRC28-203ENST00000447360 PDE4DQ08499 809 aa8.39□□□□□ -1.07
LRRC28-203ENST00000447360 TCF15Q12870 199 aa8.39□□□□□ -1.07
LRRC28-203ENST00000447360 PTK7Q13308 1070 aa8.39□□□□□ -1.07
LRRC28-203ENST00000447360 GPM6BQ13491 265 aa8.39□□□□□ -1.07
LRRC28-203ENST00000447360 TCTN1Q2MV58 587 aa8.39□□□□□ -1.07
LRRC28-203ENST00000447360 CTC1Q2NKJ3 1217 aa8.39□□□□□ -1.07
LRRC28-203ENST00000447360 IER5LQ5T953 404 aa8.39□□□□□ -1.07
LRRC28-203ENST00000447360 FAM117BQ6P1L5 589 aa8.39□□□□□ -1.07
LRRC28-203ENST00000447360 EP400NLQ6ZTU2 488 aa8.39□□□□□ -1.07
LRRC28-203ENST00000447360 KCTD1Q719H9 257 aa8.39□□□□□ -1.07
LRRC28-203ENST00000447360 RNF135Q8IUD6 432 aa8.39□□□□□ -1.07
LRRC28-203ENST00000447360 SUGP1Q8IWZ8 645 aaKnown RBP8.39□□□□□ -1.07
LRRC28-203ENST00000447360 DNERQ8NFT8 737 aa8.39□□□□□ -1.07
LRRC28-203ENST00000447360 PBXIP1Q96AQ6 731 aa8.39□□□□□ -1.07
LRRC28-203ENST00000447360 RANBP17Q9H2T7 1088 aaKnown RBP8.39□□□□□ -1.07
LRRC28-203ENST00000447360 CLDND1Q9NY35 253 aa8.39□□□□□ -1.07
LRRC28-203ENST00000447360 GTF2IRD1Q9UHL9 959 aa8.39□□□□□ -1.07
LRRC28-203ENST00000447360 WDR87Q6ZQQ6 2873 aa8.39□□□□□ -1.07
LRRC28-203ENST00000447360 BAZ2AQ9UIF9 1905 aaKnown RBP8.39□□□□□ -1.07
LRRC28-203ENST00000447360 VPS13AQ96RL7 3174 aa8.38□□□□□ -1.07
LRRC28-203ENST00000447360 PTPDC1A2A3K4 754 aa8.38□□□□□ -1.07
LRRC28-203ENST00000447360 TMEM221A6NGB7 291 aa8.38□□□□□ -1.07
LRRC28-203ENST00000447360 M0R296 226 aa8.38□□□□□ -1.07
LRRC28-203ENST00000447360 HAX1O00165 279 aa8.38□□□□□ -1.07
LRRC28-203ENST00000447360 NFIBO00712 420 aa8.38□□□□□ -1.07
LRRC28-203ENST00000447360 RAB11FIP3O75154 756 aa8.38□□□□□ -1.07
LRRC28-203ENST00000447360 LGR5O75473 907 aa8.38□□□□□ -1.07
LRRC28-203ENST00000447360 MMP3P08254 477 aa8.38□□□□□ -1.07
LRRC28-203ENST00000447360 PYGBP11216 843 aa8.38□□□□□ -1.07
LRRC28-203ENST00000447360 CASTP20810 708 aaKnown RBP8.38□□□□□ -1.07
LRRC28-203ENST00000447360 TDO2P48775 406 aa8.38□□□□□ -1.07
LRRC28-203ENST00000447360 CHMP4BP1P59074 171 aa8.38□□□□□ -1.07
LRRC28-203ENST00000447360 SNAP25P60880 206 aa8.38□□□□□ -1.07
LRRC28-203ENST00000447360 TFAP4Q01664 338 aa8.38□□□□□ -1.07
LRRC28-203ENST00000447360 TRAF7Q6Q0C0 670 aa8.38□□□□□ -1.07
LRRC28-203ENST00000447360 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.38□□□□□ -1.07
LRRC28-203ENST00000447360 TRIM67Q6ZTA4 783 aa8.38□□□□□ -1.07
LRRC28-203ENST00000447360 RPAINQ86UA6 219 aa8.38□□□□□ -1.07
LRRC28-203ENST00000447360 FBXO11Q86XK2 927 aa8.38□□□□□ -1.07
LRRC28-203ENST00000447360 MYOCDQ8IZQ8 938 aa8.38□□□□□ -1.07
LRRC28-203ENST00000447360 C7orf31Q8N865 590 aa8.38□□□□□ -1.07
LRRC28-203ENST00000447360 KAT2BQ92831 832 aa8.38□□□□□ -1.07
LRRC28-203ENST00000447360 COPS5Q92905 334 aa8.38□□□□□ -1.07
LRRC28-203ENST00000447360 YME1L1Q96TA2 773 aa8.38□□□□□ -1.07
LRRC28-203ENST00000447360 PNMA2Q9UL42 364 aa8.38□□□□□ -1.07
LRRC28-203ENST00000447360 TANC1Q9C0D5 1861 aa8.38□□□□□ -1.07
LRRC28-203ENST00000447360 TECTAO75443 2155 aa8.38□□□□□ -1.07
LRRC28-203ENST00000447360 RIF1Q5UIP0 2472 aaKnown RBP8.38□□□□□ -1.07
LRRC28-203ENST00000447360 PATL2C9JE40 543 aaKnown RBP8.37□□□□□ -1.07
LRRC28-203ENST00000447360 STXBP3O00186 592 aa8.37□□□□□ -1.07
LRRC28-203ENST00000447360 MBTPS2O43462 519 aa8.37□□□□□ -1.07
LRRC28-203ENST00000447360 SLC3A2P08195 630 aaKnown RBP8.37□□□□□ -1.07
LRRC28-203ENST00000447360 RLBP1P12271 317 aa8.37□□□□□ -1.07
LRRC28-203ENST00000447360 CALML3P27482 149 aa8.37□□□□□ -1.07
LRRC28-203ENST00000447360 SMAD4Q13485 552 aaKnown RBP8.37□□□□□ -1.07
LRRC28-203ENST00000447360 MBTPS1Q14703 1052 aa8.37□□□□□ -1.07
LRRC28-203ENST00000447360 DGKDQ16760 1214 aa8.37□□□□□ -1.07
LRRC28-203ENST00000447360 TRIM71Q2Q1W2 868 aaKnown RBP8.37□□□□□ -1.07
LRRC28-203ENST00000447360 ZNF618Q5T7W0 954 aa8.37□□□□□ -1.07
LRRC28-203ENST00000447360 CCDC62Q6P9F0 684 aa8.37□□□□□ -1.07
LRRC28-203ENST00000447360 BTNL9Q6UXG8 535 aa8.37□□□□□ -1.07
LRRC28-203ENST00000447360 RNF207Q6ZRF8 634 aa8.37□□□□□ -1.07
LRRC28-203ENST00000447360 TMEM192Q8IY95 271 aa8.37□□□□□ -1.07
LRRC28-203ENST00000447360 FBXL6Q8N531 539 aa8.37□□□□□ -1.07
LRRC28-203ENST00000447360 AFG1LQ8WV93 481 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms