RNA–Protein interactions for RNA: ENST00000447261.6

BCRP3-201, Transcript of breakpoint cluster region pseudogene 3, humanhuman

TSL 2

Gene BCRP3, Length 1,457 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCRP3-201ENST00000447261 ZNF467Q7Z7K2 595 aaPredicted RBP18.34■□□□□ 0.53
BCRP3-201ENST00000447261 LINC00301Q8NCQ3 95 aa18.34■□□□□ 0.53
BCRP3-201ENST00000447261 DCAF4Q8WV16 495 aa18.34■□□□□ 0.53
BCRP3-201ENST00000447261 PGBD1Q96JS3 809 aa18.34■□□□□ 0.53
BCRP3-201ENST00000447261 TMEM47Q9BQJ4 181 aa18.34■□□□□ 0.53
BCRP3-201ENST00000447261 PRDM5Q9NQX1 630 aaPredicted RBP18.34■□□□□ 0.53
BCRP3-201ENST00000447261 DDX19AQ9NUU7 478 aaKnown RBP18.34■□□□□ 0.53
BCRP3-201ENST00000447261 FAM184BQ9ULE4 1060 aa18.34■□□□□ 0.53
BCRP3-201ENST00000447261 PRR12Q9ULL5 1215 aa18.34■□□□□ 0.53
BCRP3-201ENST00000447261 V9GY48 417 aaPredicted RBP18.34■□□□□ 0.53
BCRP3-201ENST00000447261 SYCE3A1L190 88 aa18.33■□□□□ 0.53
BCRP3-201ENST00000447261 POTEB2H3BUK9 544 aa18.33■□□□□ 0.53
BCRP3-201ENST00000447261 PLA2G6O60733 806 aa18.33■□□□□ 0.53
BCRP3-201ENST00000447261 PLEKHA8P1O95397 391 aa18.33■□□□□ 0.53
BCRP3-201ENST00000447261 CNTN2Q02246 1040 aa18.33■□□□□ 0.53
BCRP3-201ENST00000447261 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.33■□□□□ 0.53
BCRP3-201ENST00000447261 CCDC82Q8N4S0 544 aa18.33■□□□□ 0.53
BCRP3-201ENST00000447261 SRBD1Q8N5C6 995 aaKnown RBP18.33■□□□□ 0.53
BCRP3-201ENST00000447261 TRERF1Q96PN7 1200 aa18.33■□□□□ 0.53
BCRP3-201ENST00000447261 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.33■□□□□ 0.53
BCRP3-201ENST00000447261 ZNF536O15090 1300 aa18.33■□□□□ 0.53
BCRP3-201ENST00000447261 CNTNAP5Q8WYK1 1306 aa18.33■□□□□ 0.53
BCRP3-201ENST00000447261 SLC16A2P36021 539 aa18.33■□□□□ 0.52
BCRP3-201ENST00000447261 ACVR2BQ13705 512 aa18.33■□□□□ 0.52
BCRP3-201ENST00000447261 ADALQ6DHV7 355 aa18.33■□□□□ 0.52
BCRP3-201ENST00000447261 ARMCX2Q7L311 632 aa18.33■□□□□ 0.52
BCRP3-201ENST00000447261 NOSTRINQ8IVI9 506 aa18.33■□□□□ 0.52
BCRP3-201ENST00000447261 CMTR1Q8N1G2 835 aaKnown RBP18.33■□□□□ 0.52
BCRP3-201ENST00000447261 FGD4Q96M96 766 aa18.33■□□□□ 0.52
BCRP3-201ENST00000447261 A1CFQ9NQ94 594 aaKnown RBP18.33■□□□□ 0.52
BCRP3-201ENST00000447261 PHF24Q9UPV7 400 aa18.33■□□□□ 0.52
BCRP3-201ENST00000447261 FRMPD2Q68DX3 1309 aaPredicted RBP18.32■□□□□ 0.52
BCRP3-201ENST00000447261 A0A1W2PQ27 194 aa18.32■□□□□ 0.52
BCRP3-201ENST00000447261 A0A1W2PQ64 194 aa18.32■□□□□ 0.52
BCRP3-201ENST00000447261 A0A1W2PQD8 194 aa18.32■□□□□ 0.52
BCRP3-201ENST00000447261 PALM3A6NDB9 673 aaPredicted RBP18.32■□□□□ 0.52
BCRP3-201ENST00000447261 XRCC6P12956 609 aaKnown RBP eCLIP18.32■□□□□ 0.52
BCRP3-201ENST00000447261 STK38Q15208 465 aa18.32■□□□□ 0.52
BCRP3-201ENST00000447261 TKFCQ3LXA3 575 aa18.32■□□□□ 0.52
BCRP3-201ENST00000447261 TTBK2Q6IQ55 1244 aa18.32■□□□□ 0.52
BCRP3-201ENST00000447261 DIS3L2Q8IYB7 885 aaKnown RBP18.32■□□□□ 0.52
BCRP3-201ENST00000447261 BICD2Q8TD16 824 aa18.32■□□□□ 0.52
BCRP3-201ENST00000447261 PHF20Q9BVI0 1012 aa18.32■□□□□ 0.52
BCRP3-201ENST00000447261 BRMS1Q9HCU9 246 aa18.32■□□□□ 0.52
BCRP3-201ENST00000447261 GPCPD1Q9NPB8 672 aa18.32■□□□□ 0.52
BCRP3-201ENST00000447261 SH3GLB2Q9NR46 395 aa18.32■□□□□ 0.52
BCRP3-201ENST00000447261 CCPG1Q9ULG6 757 aa18.32■□□□□ 0.52
BCRP3-201ENST00000447261 SPTLC2O15270 562 aa18.31■□□□□ 0.52
BCRP3-201ENST00000447261 SCG2P13521 617 aa18.31■□□□□ 0.52
BCRP3-201ENST00000447261 CEBPZQ03701 1054 aaKnown RBP18.31■□□□□ 0.52
BCRP3-201ENST00000447261 SLC39A14Q15043 492 aa18.31■□□□□ 0.52
BCRP3-201ENST00000447261 SF3A1Q15459 793 aaKnown RBP18.31■□□□□ 0.52
BCRP3-201ENST00000447261 PFKFB3Q16875 520 aaPredicted RBP18.31■□□□□ 0.52
BCRP3-201ENST00000447261 RILPL1Q5EBL4 403 aa18.31■□□□□ 0.52
BCRP3-201ENST00000447261 ABHD16BQ9H3Z7 469 aa18.31■□□□□ 0.52
BCRP3-201ENST00000447261 MAD2L2Q9UI95 211 aa18.31■□□□□ 0.52
BCRP3-201ENST00000447261 SYNRGQ9UMZ2 1314 aa18.31■□□□□ 0.52
BCRP3-201ENST00000447261 A0A1W2PQ45 241 aaPredicted RBP18.3■□□□□ 0.52
BCRP3-201ENST00000447261 A0A1W2PQY0 241 aa18.3■□□□□ 0.52
BCRP3-201ENST00000447261 BTBD18B2RXH4 712 aa18.3■□□□□ 0.52
BCRP3-201ENST00000447261 PPP6R2O75170 966 aa18.3■□□□□ 0.52
BCRP3-201ENST00000447261 ADAMTS4O75173 837 aa18.3■□□□□ 0.52
BCRP3-201ENST00000447261 ME1P48163 572 aa18.3■□□□□ 0.52
BCRP3-201ENST00000447261 SNX17Q15036 470 aa18.3■□□□□ 0.52
BCRP3-201ENST00000447261 CCDC144BQ3MJ40 725 aa18.3■□□□□ 0.52
BCRP3-201ENST00000447261 LRIT3Q3SXY7 679 aa18.3■□□□□ 0.52
BCRP3-201ENST00000447261 MUM1L1Q5H9M0 696 aa18.3■□□□□ 0.52
BCRP3-201ENST00000447261 SYDE2Q5VT97 1194 aa18.3■□□□□ 0.52
BCRP3-201ENST00000447261 FAM133AQ8N9E0 248 aa18.3■□□□□ 0.52
BCRP3-201ENST00000447261 CLIC4Q9Y696 253 aa18.3■□□□□ 0.52
BCRP3-201ENST00000447261 MORC2Q9Y6X9 1032 aaPredicted RBP18.3■□□□□ 0.52
BCRP3-201ENST00000447261 DUSP11O75319 330 aaKnown RBP18.29■□□□□ 0.52
BCRP3-201ENST00000447261 LIG1P18858 919 aa18.29■□□□□ 0.52
BCRP3-201ENST00000447261 TLE2Q04725 743 aa18.29■□□□□ 0.52
BCRP3-201ENST00000447261 NSMFQ6X4W1 530 aa18.29■□□□□ 0.52
BCRP3-201ENST00000447261 SPZ1Q9BXG8 430 aa18.29■□□□□ 0.52
BCRP3-201ENST00000447261 FTOQ9C0B1 505 aaKnown RBP eCLIP18.29■□□□□ 0.52
BCRP3-201ENST00000447261 NUP62CLQ9H1M0 184 aa18.29■□□□□ 0.52
BCRP3-201ENST00000447261 PDLIM7Q9NR12 457 aa18.29■□□□□ 0.52
BCRP3-201ENST00000447261 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.29■□□□□ 0.52
BCRP3-201ENST00000447261 PCDHA7Q9UN72 937 aa18.29■□□□□ 0.52
BCRP3-201ENST00000447261 KCNJ14Q9UNX9 436 aa18.29■□□□□ 0.52
BCRP3-201ENST00000447261 MYADML2A6NDP7 307 aa18.28■□□□□ 0.52
BCRP3-201ENST00000447261 SOWAHBA6NEL2 793 aa18.28■□□□□ 0.52
BCRP3-201ENST00000447261 PQBP1O60828 265 aaKnown RBP18.28■□□□□ 0.52
BCRP3-201ENST00000447261 ICAM1P05362 532 aa18.28■□□□□ 0.52
BCRP3-201ENST00000447261 PARP1P09874 1014 aaKnown RBP18.28■□□□□ 0.52
BCRP3-201ENST00000447261 C6orf222P0C671 652 aaPredicted RBP18.28■□□□□ 0.52
BCRP3-201ENST00000447261 PDHBP11177 359 aa18.28■□□□□ 0.52
BCRP3-201ENST00000447261 KRT2P35908 639 aa18.28■□□□□ 0.52
BCRP3-201ENST00000447261 ACLYP53396 1101 aa18.28■□□□□ 0.52
BCRP3-201ENST00000447261 KCNA10Q16322 511 aa18.28■□□□□ 0.52
BCRP3-201ENST00000447261 C1orf53Q5VUE5 145 aa18.28■□□□□ 0.52
BCRP3-201ENST00000447261 CCDC73Q6ZRK6 1079 aa18.28■□□□□ 0.52
BCRP3-201ENST00000447261 SH3RF1Q7Z6J0 888 aa18.28■□□□□ 0.52
BCRP3-201ENST00000447261 TSEN34Q9BSV6 310 aaKnown RBP18.28■□□□□ 0.52
BCRP3-201ENST00000447261 RANBP17Q9H2T7 1088 aaKnown RBP18.28■□□□□ 0.52
BCRP3-201ENST00000447261 TSPY26PQ9H489 355 aa18.28■□□□□ 0.52
BCRP3-201ENST00000447261 SPC25Q9HBM1 224 aa18.28■□□□□ 0.52
BCRP3-201ENST00000447261 STARD7Q9NQZ5 370 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms