RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 EIF3JO75822 258 aaKnown RBP21.13■□□□□ 0.97
COL9A1-205ENST00000447041 SART3Q15020 963 aaKnown RBP21.13■□□□□ 0.97
COL9A1-205ENST00000447041 TMEM67Q5HYA8 995 aa21.13■□□□□ 0.97
COL9A1-205ENST00000447041 RPUSD2Q8IZ73 545 aaKnown RBP21.13■□□□□ 0.97
COL9A1-205ENST00000447041 PDCD2LQ9BRP1 358 aa21.13■□□□□ 0.97
COL9A1-205ENST00000447041 DDX41Q9UJV9 622 aaKnown RBP21.13■□□□□ 0.97
COL9A1-205ENST00000447041 MRVI1Q9Y6F6 885 aa21.13■□□□□ 0.97
COL9A1-205ENST00000447041 PRUNE2Q8WUY3 3088 aa21.13■□□□□ 0.97
COL9A1-205ENST00000447041 MYCLP12524 364 aaPredicted RBP21.12■□□□□ 0.97
COL9A1-205ENST00000447041 PTPN11Q06124 597 aaPredicted RBP21.12■□□□□ 0.97
COL9A1-205ENST00000447041 DEFB128Q7Z7B8 93 aa21.12■□□□□ 0.97
COL9A1-205ENST00000447041 IL31RAQ8NI17 732 aa21.12■□□□□ 0.97
COL9A1-205ENST00000447041 KAT2BQ92831 832 aa21.12■□□□□ 0.97
COL9A1-205ENST00000447041 YBX2Q9Y2T7 364 aaKnown RBP21.12■□□□□ 0.97
COL9A1-205ENST00000447041 BAZ2BQ9UIF8 2168 aaKnown RBP21.12■□□□□ 0.97
COL9A1-205ENST00000447041 VCANP13611 3396 aa21.11■□□□□ 0.97
COL9A1-205ENST00000447041 ZBBXA8MT70 800 aa21.11■□□□□ 0.97
COL9A1-205ENST00000447041 RGS20O76081 388 aa21.11■□□□□ 0.97
COL9A1-205ENST00000447041 PGM5Q15124 567 aa21.11■□□□□ 0.97
COL9A1-205ENST00000447041 RAB30Q15771 203 aa21.11■□□□□ 0.97
COL9A1-205ENST00000447041 CATIPQ7Z7H3 387 aa21.11■□□□□ 0.97
COL9A1-205ENST00000447041 IGDCC4Q8TDY8 1250 aa21.11■□□□□ 0.97
COL9A1-205ENST00000447041 MYL10Q9BUA6 226 aa21.11■□□□□ 0.97
COL9A1-205ENST00000447041 NKX2-4Q9H2Z4 354 aa21.11■□□□□ 0.97
COL9A1-205ENST00000447041 MAP3K20Q9NYL2 800 aaKnown RBP21.11■□□□□ 0.97
COL9A1-205ENST00000447041 MYH7BA7E2Y1 1941 aa21.1■□□□□ 0.97
COL9A1-205ENST00000447041 PITPNM1O00562 1244 aa21.1■□□□□ 0.97
COL9A1-205ENST00000447041 RABGGTBP53611 331 aa21.1■□□□□ 0.97
COL9A1-205ENST00000447041 PIBF1Q8WXW3 757 aa21.1■□□□□ 0.97
COL9A1-205ENST00000447041 EMID1Q96A84 441 aaPredicted RBP21.1■□□□□ 0.97
COL9A1-205ENST00000447041 ZFP91Q96JP5 570 aaPredicted RBP21.1■□□□□ 0.97
COL9A1-205ENST00000447041 CTAGE1Q96RT6 745 aa21.1■□□□□ 0.97
COL9A1-205ENST00000447041 LSG1Q9H089 658 aaKnown RBP21.1■□□□□ 0.97
COL9A1-205ENST00000447041 LY9Q9HBG7 655 aa21.1■□□□□ 0.97
COL9A1-205ENST00000447041 MSRAQ9UJ68 235 aa21.1■□□□□ 0.97
COL9A1-205ENST00000447041 NOD1Q9Y239 953 aa21.1■□□□□ 0.97
COL9A1-205ENST00000447041 SLC4A7Q9Y6M7 1214 aa21.1■□□□□ 0.97
COL9A1-205ENST00000447041 CHD9Q3L8U1 2897 aa21.09■□□□□ 0.97
COL9A1-205ENST00000447041 PNMA6FA0A0J9YX94 578 aa21.09■□□□□ 0.97
COL9A1-205ENST00000447041 GCOM1H8Y6P7 765 aaPredicted RBP21.09■□□□□ 0.97
COL9A1-205ENST00000447041 SORBS3O60504 671 aa21.09■□□□□ 0.97
COL9A1-205ENST00000447041 PFKMP08237 780 aa21.09■□□□□ 0.97
COL9A1-205ENST00000447041 IQCF3P0C7M6 154 aa21.09■□□□□ 0.97
COL9A1-205ENST00000447041 POLR2MP0CAP2 368 aa21.09■□□□□ 0.97
COL9A1-205ENST00000447041 ZNF286BP0CG31 522 aa21.09■□□□□ 0.97
COL9A1-205ENST00000447041 CASTP20810 708 aaKnown RBP21.09■□□□□ 0.97
COL9A1-205ENST00000447041 COL9A3Q14050 684 aaPredicted RBP21.09■□□□□ 0.97
COL9A1-205ENST00000447041 PTGISQ16647 500 aa21.09■□□□□ 0.97
COL9A1-205ENST00000447041 DGKDQ16760 1214 aa21.09■□□□□ 0.97
COL9A1-205ENST00000447041 GDF6Q6KF10 455 aaPredicted RBP21.09■□□□□ 0.97
COL9A1-205ENST00000447041 FCHSD1Q86WN1 690 aa21.09■□□□□ 0.97
COL9A1-205ENST00000447041 ZNF654Q8IZM8 581 aa21.09■□□□□ 0.97
COL9A1-205ENST00000447041 SAMD3Q8N6K7 520 aa21.09■□□□□ 0.97
COL9A1-205ENST00000447041 USP38Q8NB14 1042 aa21.09■□□□□ 0.97
COL9A1-205ENST00000447041 COL25A1Q9BXS0 654 aaPredicted RBP21.09■□□□□ 0.97
COL9A1-205ENST00000447041 PRDM12Q9H4Q4 367 aa21.09■□□□□ 0.97
COL9A1-205ENST00000447041 VSIG10LQ86VR7 867 aa21.08■□□□□ 0.97
COL9A1-205ENST00000447041 SESTD1Q86VW0 696 aa21.08■□□□□ 0.97
COL9A1-205ENST00000447041 SKAP1Q86WV1 359 aa21.08■□□□□ 0.97
COL9A1-205ENST00000447041 DHX37Q8IY37 1157 aaKnown RBP21.08■□□□□ 0.97
COL9A1-205ENST00000447041 PPTC7Q8NI37 304 aa21.08■□□□□ 0.97
COL9A1-205ENST00000447041 GPKOWQ92917 476 aaPredicted RBP eCLIP21.08■□□□□ 0.97
COL9A1-205ENST00000447041 PRC1O43663 620 aa21.07■□□□□ 0.96
COL9A1-205ENST00000447041 MYOGP15173 224 aa21.07■□□□□ 0.96
COL9A1-205ENST00000447041 CCND2P30279 289 aa21.07■□□□□ 0.96
COL9A1-205ENST00000447041 RFC2P35250 354 aa21.07■□□□□ 0.96
COL9A1-205ENST00000447041 PSEN2P49810 448 aa21.07■□□□□ 0.96
COL9A1-205ENST00000447041 TRAF1Q13077 416 aa21.07■□□□□ 0.96
COL9A1-205ENST00000447041 BFSP2Q13515 415 aa21.07■□□□□ 0.96
COL9A1-205ENST00000447041 LAMC2Q13753 1193 aa21.07■□□□□ 0.96
COL9A1-205ENST00000447041 RETREG2Q8NC44 543 aa21.07■□□□□ 0.96
COL9A1-205ENST00000447041 DHX38Q92620 1227 aaKnown RBP21.07■□□□□ 0.96
COL9A1-205ENST00000447041 ESYT1Q9BSJ8 1104 aa21.07■□□□□ 0.96
COL9A1-205ENST00000447041 ALG1Q9BT22 464 aa21.07■□□□□ 0.96
COL9A1-205ENST00000447041 GTF2IRD1Q9UHL9 959 aa21.07■□□□□ 0.96
COL9A1-205ENST00000447041 SLC27A2O14975 620 aa21.06■□□□□ 0.96
COL9A1-205ENST00000447041 DDAH1O94760 285 aa21.06■□□□□ 0.96
COL9A1-205ENST00000447041 GGPS1O95749 300 aa21.06■□□□□ 0.96
COL9A1-205ENST00000447041 F2P00734 622 aa21.06■□□□□ 0.96
COL9A1-205ENST00000447041 ATP2A2P16615 1042 aaKnown RBP21.06■□□□□ 0.96
COL9A1-205ENST00000447041 UBA1P22314 1058 aaKnown RBP21.06■□□□□ 0.96
COL9A1-205ENST00000447041 SP2Q02086 613 aa21.06■□□□□ 0.96
COL9A1-205ENST00000447041 MFSD10Q14728 455 aa21.06■□□□□ 0.96
COL9A1-205ENST00000447041 MYSM1Q5VVJ2 828 aa21.06■□□□□ 0.96
COL9A1-205ENST00000447041 CASC1Q6TDU7 716 aa21.06■□□□□ 0.96
COL9A1-205ENST00000447041 CTCFLQ8NI51 663 aaPredicted RBP21.06■□□□□ 0.96
COL9A1-205ENST00000447041 GAS2L1Q99501 681 aaPredicted RBP21.06■□□□□ 0.96
COL9A1-205ENST00000447041 SLC28A3Q9HAS3 691 aa21.06■□□□□ 0.96
COL9A1-205ENST00000447041 HDAC6Q9UBN7 1215 aa21.06■□□□□ 0.96
COL9A1-205ENST00000447041 SPTBN5Q9NRC6 3674 aaKnown RBP21.06■□□□□ 0.96
COL9A1-205ENST00000447041 TRIP12Q14669 1992 aaPredicted RBP21.06■□□□□ 0.96
COL9A1-205ENST00000447041 FRMPD4Q14CM0 1322 aa21.05■□□□□ 0.96
COL9A1-205ENST00000447041 SH2B2O14492 632 aaPredicted RBP21.05■□□□□ 0.96
COL9A1-205ENST00000447041 HOXD8P13378 290 aaPredicted RBP21.05■□□□□ 0.96
COL9A1-205ENST00000447041 KIAA0753Q2KHM9 967 aa21.05■□□□□ 0.96
COL9A1-205ENST00000447041 HSDL1Q3SXM5 330 aa21.05■□□□□ 0.96
COL9A1-205ENST00000447041 CELF3Q5SZQ8 465 aaKnown RBP21.05■□□□□ 0.96
COL9A1-205ENST00000447041 MAP3K14Q99558 947 aa21.05■□□□□ 0.96
COL9A1-205ENST00000447041 KATNAL1Q9BW62 490 aa21.05■□□□□ 0.96
COL9A1-205ENST00000447041 SPZ1Q9BXG8 430 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms