RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 C7orf25Q9BPX7 421 aa15.75■□□□□ 0.11
ERCC3-203ENST00000445889 PACSIN1Q9BY11 444 aa15.75■□□□□ 0.11
ERCC3-203ENST00000445889 GUCY1A3Q02108 690 aa15.74■□□□□ 0.11
ERCC3-203ENST00000445889 PPFIA1Q13136 1202 aa15.74■□□□□ 0.11
ERCC3-203ENST00000445889 ECM1Q16610 540 aa15.74■□□□□ 0.11
ERCC3-203ENST00000445889 KLHDC7AQ5VTJ3 777 aa15.74■□□□□ 0.11
ERCC3-203ENST00000445889 FAM114A1Q8IWE2 563 aa15.74■□□□□ 0.11
ERCC3-203ENST00000445889 ZSCAN29Q8IWY8 852 aaPredicted RBP15.74■□□□□ 0.11
ERCC3-203ENST00000445889 AMOTL1Q8IY63 956 aa15.74■□□□□ 0.11
ERCC3-203ENST00000445889 CALML4Q96GE6 196 aa15.74■□□□□ 0.11
ERCC3-203ENST00000445889 CDK5RAP3Q96JB5 506 aa15.74■□□□□ 0.11
ERCC3-203ENST00000445889 CCDC43Q96MW1 224 aaKnown RBP15.74■□□□□ 0.11
ERCC3-203ENST00000445889 STIM2Q9P246 746 aa15.74■□□□□ 0.11
ERCC3-203ENST00000445889 ANKIB1Q9P2G1 1089 aa15.74■□□□□ 0.11
ERCC3-203ENST00000445889 PAFAH1B1P43034 410 aa15.74■□□□□ 0.11
ERCC3-203ENST00000445889 EHHADHQ08426 723 aa15.74■□□□□ 0.11
ERCC3-203ENST00000445889 CNNM4Q6P4Q7 775 aa15.74■□□□□ 0.11
ERCC3-203ENST00000445889 MMGT1Q8N4V1 131 aa15.74■□□□□ 0.11
ERCC3-203ENST00000445889 NOC3LQ8WTT2 800 aaKnown RBP15.74■□□□□ 0.11
ERCC3-203ENST00000445889 PNMA5Q96PV4 448 aa15.74■□□□□ 0.11
ERCC3-203ENST00000445889 KRT12Q99456 494 aa15.74■□□□□ 0.11
ERCC3-203ENST00000445889 SH3GLB2Q9NR46 395 aa15.74■□□□□ 0.11
ERCC3-203ENST00000445889 HYOU1Q9Y4L1 999 aa15.74■□□□□ 0.11
ERCC3-203ENST00000445889 SHOX2O60902 331 aaPredicted RBP15.74■□□□□ 0.11
ERCC3-203ENST00000445889 PALMO75781 387 aa15.74■□□□□ 0.11
ERCC3-203ENST00000445889 ERLIN2O94905 339 aa15.74■□□□□ 0.11
ERCC3-203ENST00000445889 POLR2FP61218 127 aaKnown RBP15.74■□□□□ 0.11
ERCC3-203ENST00000445889 KCNMA1Q12791 1236 aa15.74■□□□□ 0.11
ERCC3-203ENST00000445889 CENPPQ6IPU0 288 aa15.74■□□□□ 0.11
ERCC3-203ENST00000445889 KLHL7Q8IXQ5 586 aa15.74■□□□□ 0.11
ERCC3-203ENST00000445889 DDX12PQ92771 950 aa15.74■□□□□ 0.11
ERCC3-203ENST00000445889 ZHX3Q9H4I2 956 aa15.74■□□□□ 0.11
ERCC3-203ENST00000445889 GRIN2DO15399 1336 aa15.73■□□□□ 0.11
ERCC3-203ENST00000445889 LRP5O75197 1615 aa15.73■□□□□ 0.11
ERCC3-203ENST00000445889 A0A087WUV0 522 aaPredicted RBP15.73■□□□□ 0.11
ERCC3-203ENST00000445889 NPHP3-ACAD11A0A0J9YXS1 232 aa15.73■□□□□ 0.11
ERCC3-203ENST00000445889 PALM3A6NDB9 673 aaPredicted RBP15.73■□□□□ 0.11
ERCC3-203ENST00000445889 USP17L5A8MUK1 530 aa15.73■□□□□ 0.11
ERCC3-203ENST00000445889 LDHBP07195 334 aaKnown RBP15.73■□□□□ 0.11
ERCC3-203ENST00000445889 SLURP2P0DP57 97 aa15.73■□□□□ 0.11
ERCC3-203ENST00000445889 SF3B3Q15393 1217 aaKnown RBP15.73■□□□□ 0.11
ERCC3-203ENST00000445889 SBK1Q52WX2 424 aa15.73■□□□□ 0.11
ERCC3-203ENST00000445889 SOGA3Q5TF21 947 aa15.73■□□□□ 0.11
ERCC3-203ENST00000445889 FNBP4Q8N3X1 1017 aaPredicted RBP15.73■□□□□ 0.11
ERCC3-203ENST00000445889 BAP1Q92560 729 aa15.73■□□□□ 0.11
ERCC3-203ENST00000445889 ALS2CR12Q96Q35 445 aa15.73■□□□□ 0.11
ERCC3-203ENST00000445889 TSGA10Q9BZW7 698 aa15.73■□□□□ 0.11
ERCC3-203ENST00000445889 SHTN1A0MZ66 631 aa15.73■□□□□ 0.11
ERCC3-203ENST00000445889 TRAF5O00463 557 aa15.73■□□□□ 0.11
ERCC3-203ENST00000445889 RASA1P20936 1047 aa15.73■□□□□ 0.11
ERCC3-203ENST00000445889 ZNF662Q6ZS27 426 aa15.73■□□□□ 0.11
ERCC3-203ENST00000445889 ZMYND12Q9H0C1 365 aa15.73■□□□□ 0.11
ERCC3-203ENST00000445889 ADAMTS1Q9UHI8 967 aa15.73■□□□□ 0.11
ERCC3-203ENST00000445889 ZNF652Q9Y2D9 606 aa15.73■□□□□ 0.11
ERCC3-203ENST00000445889 ITGB4P16144 1822 aa15.72■□□□□ 0.11
ERCC3-203ENST00000445889 EIF3HO15372 352 aaKnown RBP eCLIP15.72■□□□□ 0.11
ERCC3-203ENST00000445889 TLR2O60603 784 aa15.72■□□□□ 0.11
ERCC3-203ENST00000445889 HSF2BPO75031 334 aa15.72■□□□□ 0.11
ERCC3-203ENST00000445889 HEXIM1O94992 359 aaKnown RBP15.72■□□□□ 0.11
ERCC3-203ENST00000445889 KLRC1P26715 233 aa15.72■□□□□ 0.11
ERCC3-203ENST00000445889 SEC24CP53992 1094 aa15.72■□□□□ 0.11
ERCC3-203ENST00000445889 AMPD3Q01432 767 aa15.72■□□□□ 0.11
ERCC3-203ENST00000445889 NNTQ13423 1086 aa15.72■□□□□ 0.11
ERCC3-203ENST00000445889 CALCRLQ16602 461 aa15.72■□□□□ 0.11
ERCC3-203ENST00000445889 UBE2SQ16763 222 aa15.72■□□□□ 0.11
ERCC3-203ENST00000445889 SNX29Q8TEQ0 813 aa15.72■□□□□ 0.11
ERCC3-203ENST00000445889 TBC1D5Q92609 795 aa15.72■□□□□ 0.11
ERCC3-203ENST00000445889 LARP4BQ92615 738 aaKnown RBP15.72■□□□□ 0.11
ERCC3-203ENST00000445889 NLRP3Q96P20 1036 aa15.72■□□□□ 0.11
ERCC3-203ENST00000445889 EYA3Q99504 573 aa15.72■□□□□ 0.11
ERCC3-203ENST00000445889 NDUFAB1O14561 156 aa15.72■□□□□ 0.11
ERCC3-203ENST00000445889 TNNI2P48788 182 aa15.72■□□□□ 0.11
ERCC3-203ENST00000445889 NBPF5PQ86XG9 351 aaPredicted RBP15.72■□□□□ 0.11
ERCC3-203ENST00000445889 LINC00116Q8NCU8 138 aa15.72■□□□□ 0.11
ERCC3-203ENST00000445889 CEP95Q96GE4 821 aa15.72■□□□□ 0.11
ERCC3-203ENST00000445889 BACH1O14867 736 aa15.71■□□□□ 0.11
ERCC3-203ENST00000445889 RAD21O60216 631 aa15.71■□□□□ 0.11
ERCC3-203ENST00000445889 GNAQP50148 359 aa15.71■□□□□ 0.11
ERCC3-203ENST00000445889 SF3A3Q12874 501 aaKnown RBP eCLIP15.71■□□□□ 0.113e-11■■□□□ 13.1
ERCC3-203ENST00000445889 NFIXQ14938 502 aa15.71■□□□□ 0.11
ERCC3-203ENST00000445889 MAN2A1Q16706 1144 aa15.71■□□□□ 0.11
ERCC3-203ENST00000445889 CCDC40Q4G0X9 1142 aa15.71■□□□□ 0.11
ERCC3-203ENST00000445889 LRRC47Q8N1G4 583 aaKnown RBP15.71■□□□□ 0.11
ERCC3-203ENST00000445889 OR2W6PQ8NHA6 318 aa15.71■□□□□ 0.11
ERCC3-203ENST00000445889 RNPC3Q96LT9 517 aaKnown RBP15.71■□□□□ 0.11
ERCC3-203ENST00000445889 C6orf50Q9HD87 102 aa15.71■□□□□ 0.11
ERCC3-203ENST00000445889 GPCPD1Q9NPB8 672 aa15.71■□□□□ 0.11
ERCC3-203ENST00000445889 TCP1P17987 556 aaKnown RBP15.71■□□□□ 0.11
ERCC3-203ENST00000445889 HPDP32754 393 aaPredicted RBP15.71■□□□□ 0.11
ERCC3-203ENST00000445889 RAPGEF1Q13905 1077 aa15.71■□□□□ 0.11
ERCC3-203ENST00000445889 HGSNATQ68CP4 663 aa15.71■□□□□ 0.11
ERCC3-203ENST00000445889 DDX42Q86XP3 938 aaKnown RBP eCLIP15.71■□□□□ 0.11
ERCC3-203ENST00000445889 REXO1Q8N1G1 1221 aaKnown RBP15.71■□□□□ 0.11
ERCC3-203ENST00000445889 SEC63Q9UGP8 760 aaKnown RBP15.71■□□□□ 0.11
ERCC3-203ENST00000445889 A0A1W2PQJ5 194 aa15.71■□□□□ 0.1
ERCC3-203ENST00000445889 ZNF233A6NK53 670 aa15.71■□□□□ 0.1
ERCC3-203ENST00000445889 MYL1P05976 194 aa15.71■□□□□ 0.1
ERCC3-203ENST00000445889 PRPHP41219 470 aa15.71■□□□□ 0.1
ERCC3-203ENST00000445889 EPHB4P54760 987 aa15.71■□□□□ 0.1
ERCC3-203ENST00000445889 FAM133AQ8N9E0 248 aa15.71■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms