RNA–Protein interactions for RNA: ENST00000445153.1

SMARCAL1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 5

Gene SMARCAL1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-210ENST00000445153 EIF2AK2P19525 551 aaKnown RBP16.55■□□□□ 0.24
SMARCAL1-210ENST00000445153 TFF2Q03403 129 aa16.55■□□□□ 0.24
SMARCAL1-210ENST00000445153 TAP1Q03518 808 aa16.55■□□□□ 0.24
SMARCAL1-210ENST00000445153 AAMPQ13685 434 aa16.55■□□□□ 0.24
SMARCAL1-210ENST00000445153 STXBP2Q15833 593 aa16.55■□□□□ 0.24
SMARCAL1-210ENST00000445153 ASPRV1Q53RT3 343 aa16.55■□□□□ 0.24
SMARCAL1-210ENST00000445153 CCDC178Q5BJE1 867 aa16.55■□□□□ 0.24
SMARCAL1-210ENST00000445153 SESTD1Q86VW0 696 aa16.55■□□□□ 0.24
SMARCAL1-210ENST00000445153 FBXO11Q86XK2 927 aa16.55■□□□□ 0.24
SMARCAL1-210ENST00000445153 HERC6Q8IVU3 1022 aa16.55■□□□□ 0.24
SMARCAL1-210ENST00000445153 IWS1Q96ST2 819 aa16.55■□□□□ 0.24
SMARCAL1-210ENST00000445153 MAF1Q9H063 256 aa16.55■□□□□ 0.24
SMARCAL1-210ENST00000445153 MTCH2Q9Y6C9 303 aa16.55■□□□□ 0.24
SMARCAL1-210ENST00000445153 REV3LO60673 3130 aa16.54■□□□□ 0.24
SMARCAL1-210ENST00000445153 CFBP00751 764 aa16.54■□□□□ 0.24
SMARCAL1-210ENST00000445153 NR3C2P08235 984 aa16.54■□□□□ 0.24
SMARCAL1-210ENST00000445153 PARP1P09874 1014 aaKnown RBP16.54■□□□□ 0.24
SMARCAL1-210ENST00000445153 ACTN1P12814 892 aa16.54■□□□□ 0.24
SMARCAL1-210ENST00000445153 BMP1P13497 986 aa16.54■□□□□ 0.24
SMARCAL1-210ENST00000445153 POU3F3P20264 500 aaPredicted RBP16.54■□□□□ 0.24
SMARCAL1-210ENST00000445153 IRX6P78412 446 aaPredicted RBP16.54■□□□□ 0.24
SMARCAL1-210ENST00000445153 BFSP2Q13515 415 aa16.54■□□□□ 0.24
SMARCAL1-210ENST00000445153 SEC23AQ15436 765 aa16.54■□□□□ 0.24
SMARCAL1-210ENST00000445153 ARHGEF16Q5VV41 709 aa16.54■□□□□ 0.24
SMARCAL1-210ENST00000445153 CYB5R4Q7L1T6 521 aa16.54■□□□□ 0.24
SMARCAL1-210ENST00000445153 MCF2L2Q86YR7 1114 aa16.54■□□□□ 0.24
SMARCAL1-210ENST00000445153 PHOSPHO2Q8TCD6 241 aa16.54■□□□□ 0.24
SMARCAL1-210ENST00000445153 WNT8BQ93098 351 aa16.54■□□□□ 0.24
SMARCAL1-210ENST00000445153 ZFP91Q96JP5 570 aaPredicted RBP16.54■□□□□ 0.24
SMARCAL1-210ENST00000445153 NECAB3Q96P71 396 aaPredicted RBP16.54■□□□□ 0.24
SMARCAL1-210ENST00000445153 SLC9A7Q96T83 725 aa16.54■□□□□ 0.24
SMARCAL1-210ENST00000445153 PXMP2Q9NR77 195 aa16.54■□□□□ 0.24
SMARCAL1-210ENST00000445153 HDAC6Q9UBN7 1215 aa16.54■□□□□ 0.24
SMARCAL1-210ENST00000445153 NOD1Q9Y239 953 aa16.54■□□□□ 0.24
SMARCAL1-210ENST00000445153 MRPL11Q9Y3B7 192 aaKnown RBP16.54■□□□□ 0.24
SMARCAL1-210ENST00000445153 TRIP12Q14669 1992 aaPredicted RBP16.54■□□□□ 0.24
SMARCAL1-210ENST00000445153 PRRC2BQ5JSZ5 2229 aaKnown RBP16.53■□□□□ 0.24
SMARCAL1-210ENST00000445153 TANC1Q9C0D5 1861 aa16.53■□□□□ 0.24
SMARCAL1-210ENST00000445153 LCHNA4D1U4 455 aa16.53■□□□□ 0.24
SMARCAL1-210ENST00000445153 DHX16O60231 1041 aaKnown RBP16.53■□□□□ 0.24
SMARCAL1-210ENST00000445153 NBNO60934 754 aa16.53■□□□□ 0.24
SMARCAL1-210ENST00000445153 EIF3JO75822 258 aaKnown RBP16.53■□□□□ 0.24
SMARCAL1-210ENST00000445153 CASTP20810 708 aaKnown RBP16.53■□□□□ 0.24
SMARCAL1-210ENST00000445153 HSD17B4P51659 736 aa16.53■□□□□ 0.24
SMARCAL1-210ENST00000445153 ZNF200P98182 395 aaPredicted RBP16.53■□□□□ 0.24
SMARCAL1-210ENST00000445153 HIC1Q14526 733 aa16.53■□□□□ 0.24
SMARCAL1-210ENST00000445153 IMMTQ16891 758 aaKnown RBP16.53■□□□□ 0.24
SMARCAL1-210ENST00000445153 MTMR8Q96EF0 704 aa16.53■□□□□ 0.24
SMARCAL1-210ENST00000445153 ALG1Q9BT22 464 aa16.53■□□□□ 0.24
SMARCAL1-210ENST00000445153 GTF2IRD1Q9UHL9 959 aa16.53■□□□□ 0.24
SMARCAL1-210ENST00000445153 MAD2L2Q9UI95 211 aa16.53■□□□□ 0.24
SMARCAL1-210ENST00000445153 PTPRSQ13332 1948 aa16.53■□□□□ 0.24
SMARCAL1-210ENST00000445153 KIAA1217Q5T5P2 1943 aa16.53■□□□□ 0.24
SMARCAL1-210ENST00000445153 KLRF2D3W0D1 207 aa16.52■□□□□ 0.24
SMARCAL1-210ENST00000445153 HAS3O00219 553 aa16.52■□□□□ 0.24
SMARCAL1-210ENST00000445153 SORBS3O60504 671 aa16.52■□□□□ 0.24
SMARCAL1-210ENST00000445153 GSPT1P15170 499 aaKnown RBP16.52■□□□□ 0.24
SMARCAL1-210ENST00000445153 PSEN2P49810 448 aa16.52■□□□□ 0.24
SMARCAL1-210ENST00000445153 NT5C2P49902 561 aa16.52■□□□□ 0.24
SMARCAL1-210ENST00000445153 KCNQ1P51787 676 aa16.52■□□□□ 0.24
SMARCAL1-210ENST00000445153 SP2Q02086 613 aa16.52■□□□□ 0.24
SMARCAL1-210ENST00000445153 GHRHRQ02643 423 aa16.52■□□□□ 0.24
SMARCAL1-210ENST00000445153 TRAF7Q6Q0C0 670 aa16.52■□□□□ 0.24
SMARCAL1-210ENST00000445153 IL31RAQ8NI17 732 aa16.52■□□□□ 0.24
SMARCAL1-210ENST00000445153 AFAP1L1Q8TED9 768 aa16.52■□□□□ 0.24
SMARCAL1-210ENST00000445153 ARNTL2Q8WYA1 636 aa16.52■□□□□ 0.24
SMARCAL1-210ENST00000445153 UHRF1Q96T88 793 aaPredicted RBP16.52■□□□□ 0.24
SMARCAL1-210ENST00000445153 AMNQ9BXJ7 453 aa16.52■□□□□ 0.24
SMARCAL1-210ENST00000445153 KRT23Q9C075 422 aa16.52■□□□□ 0.24
SMARCAL1-210ENST00000445153 SENP2Q9HC62 589 aa16.52■□□□□ 0.24
SMARCAL1-210ENST00000445153 RAPGEFL1Q9UHV5 662 aa16.52■□□□□ 0.24
SMARCAL1-210ENST00000445153 PALM3A6NDB9 673 aaPredicted RBP16.51■□□□□ 0.23
SMARCAL1-210ENST00000445153 LPXNO60711 386 aa16.51■□□□□ 0.23
SMARCAL1-210ENST00000445153 ZNF286BP0CG31 522 aa16.51■□□□□ 0.23
SMARCAL1-210ENST00000445153 CKBP12277 381 aa16.51■□□□□ 0.23
SMARCAL1-210ENST00000445153 SELPP16109 830 aa16.51■□□□□ 0.23
SMARCAL1-210ENST00000445153 HOXA13P31271 388 aaPredicted RBP16.51■□□□□ 0.23
SMARCAL1-210ENST00000445153 WDR5P61964 334 aaKnown RBP16.51■□□□□ 0.23
SMARCAL1-210ENST00000445153 DEFB103AP81534 67 aa16.51■□□□□ 0.23
SMARCAL1-210ENST00000445153 RBL2Q08999 1139 aa16.51■□□□□ 0.23
SMARCAL1-210ENST00000445153 DGKDQ16760 1214 aa16.51■□□□□ 0.23
SMARCAL1-210ENST00000445153 TRIM71Q2Q1W2 868 aaKnown RBP16.51■□□□□ 0.23
SMARCAL1-210ENST00000445153 IFIT1BQ5T764 474 aaKnown RBP16.51■□□□□ 0.23
SMARCAL1-210ENST00000445153 LRRC8DQ7L1W4 858 aa16.51■□□□□ 0.23
SMARCAL1-210ENST00000445153 CAGE1Q8TC20 777 aa16.51■□□□□ 0.23
SMARCAL1-210ENST00000445153 GPKOWQ92917 476 aaPredicted RBP eCLIP16.51■□□□□ 0.23
SMARCAL1-210ENST00000445153 EMID1Q96A84 441 aaPredicted RBP16.51■□□□□ 0.23
SMARCAL1-210ENST00000445153 PDCD2LQ9BRP1 358 aa16.51■□□□□ 0.23
SMARCAL1-210ENST00000445153 BCAS3Q9H6U6 928 aa16.51■□□□□ 0.23
SMARCAL1-210ENST00000445153 CTNNA3Q9UI47 895 aa16.51■□□□□ 0.23
SMARCAL1-210ENST00000445153 MRVI1Q9Y6F6 885 aa16.51■□□□□ 0.23
SMARCAL1-210ENST00000445153 TAF6LQ9Y6J9 622 aa16.51■□□□□ 0.23
SMARCAL1-210ENST00000445153 TCF20Q9UGU0 1960 aaKnown RBP16.51■□□□□ 0.23
SMARCAL1-210ENST00000445153 HIP1O00291 1037 aa16.5■□□□□ 0.23
SMARCAL1-210ENST00000445153 BAIAP3O94812 1187 aa16.5■□□□□ 0.23
SMARCAL1-210ENST00000445153 F2P00734 622 aa16.5■□□□□ 0.23
SMARCAL1-210ENST00000445153 CXCL10P02778 98 aa16.5■□□□□ 0.23
SMARCAL1-210ENST00000445153 MYCLP12524 364 aaPredicted RBP16.5■□□□□ 0.23
SMARCAL1-210ENST00000445153 GRB10Q13322 594 aa16.5■□□□□ 0.23
SMARCAL1-210ENST00000445153 LAMC2Q13753 1193 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms