RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 MDM2Q00987 491 aaPredicted RBP19.69■□□□□ 0.74
LIME1-202ENST00000444951 CNTN2Q02246 1040 aa19.69■□□□□ 0.74
LIME1-202ENST00000444951 DIS3L2Q8IYB7 885 aaKnown RBP19.69■□□□□ 0.74
LIME1-202ENST00000444951 ABRAQ8N0Z2 381 aa19.69■□□□□ 0.74
LIME1-202ENST00000444951 REXO1Q8N1G1 1221 aaKnown RBP19.69■□□□□ 0.74
LIME1-202ENST00000444951 MAML3Q96JK9 1138 aa19.69■□□□□ 0.74
LIME1-202ENST00000444951 BTBD18B2RXH4 712 aa19.68■□□□□ 0.74
LIME1-202ENST00000444951 HSD17B4P51659 736 aa19.68■□□□□ 0.74
LIME1-202ENST00000444951 NR5A1Q13285 461 aa19.68■□□□□ 0.74
LIME1-202ENST00000444951 NPY5RQ15761 445 aa19.68■□□□□ 0.74
LIME1-202ENST00000444951 TDHQ8IZJ6 230 aa19.68■□□□□ 0.74
LIME1-202ENST00000444951 RGS22Q8NE09 1264 aa19.68■□□□□ 0.74
LIME1-202ENST00000444951 SYTL5Q8TDW5 730 aaPredicted RBP19.68■□□□□ 0.74
LIME1-202ENST00000444951 UBE2OQ9C0C9 1292 aaKnown RBP19.68■□□□□ 0.74
LIME1-202ENST00000444951 GLT8D2Q9H1C3 349 aa19.68■□□□□ 0.74
LIME1-202ENST00000444951 COL20A1Q9P218 1284 aa19.68■□□□□ 0.74
LIME1-202ENST00000444951 SPDYE3A6NKU9 549 aa19.67■□□□□ 0.74
LIME1-202ENST00000444951 SEPT4O43236 478 aa19.67■□□□□ 0.74
LIME1-202ENST00000444951 STX6O43752 255 aa19.67■□□□□ 0.74
LIME1-202ENST00000444951 GALNT17Q6IS24 598 aa19.67■□□□□ 0.74
LIME1-202ENST00000444951 FERMT3Q86UX7 667 aa19.67■□□□□ 0.74
LIME1-202ENST00000444951 TAAR1Q96RJ0 339 aa19.67■□□□□ 0.74
LIME1-202ENST00000444951 PCDHA6Q9UN73 950 aa19.67■□□□□ 0.74
LIME1-202ENST00000444951 PCDHA8Q9Y5H6 950 aa19.67■□□□□ 0.74
LIME1-202ENST00000444951 LTBP2Q14767 1821 aa19.67■□□□□ 0.74
LIME1-202ENST00000444951 PIK3CDO00329 1044 aa19.66■□□□□ 0.74
LIME1-202ENST00000444951 RTP1P59025 263 aa19.66■□□□□ 0.74
LIME1-202ENST00000444951 LRIT3Q3SXY7 679 aa19.66■□□□□ 0.74
LIME1-202ENST00000444951 Q7L0L9 218 aa19.66■□□□□ 0.74
LIME1-202ENST00000444951 FAM177A1Q8N128 213 aaPredicted RBP19.66■□□□□ 0.74
LIME1-202ENST00000444951 DAGLBQ8NCG7 672 aa19.66■□□□□ 0.74
LIME1-202ENST00000444951 KIF28PB7ZC32 967 aa19.65■□□□□ 0.74
LIME1-202ENST00000444951 MYCNP04198 464 aaPredicted RBP19.65■□□□□ 0.74
LIME1-202ENST00000444951 EIF2AK2P19525 551 aaKnown RBP19.65■□□□□ 0.74
LIME1-202ENST00000444951 CLK2P49760 499 aaKnown RBP19.65■□□□□ 0.74
LIME1-202ENST00000444951 PKP1Q13835 747 aa19.65■□□□□ 0.74
LIME1-202ENST00000444951 ZNF792Q3KQV3 632 aa19.65■□□□□ 0.74
LIME1-202ENST00000444951 ARHGEF16Q5VV41 709 aa19.65■□□□□ 0.74
LIME1-202ENST00000444951 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.65■□□□□ 0.74
LIME1-202ENST00000444951 RMDN3Q96TC7 470 aa19.65■□□□□ 0.74
LIME1-202ENST00000444951 ANO3Q9BYT9 981 aa19.65■□□□□ 0.74
LIME1-202ENST00000444951 MTMR6Q9Y217 621 aa19.65■□□□□ 0.74
LIME1-202ENST00000444951 DDX49Q9Y6V7 483 aaKnown RBP19.65■□□□□ 0.74
LIME1-202ENST00000444951 CCDC194A0A1B0GVG4 234 aa19.64■□□□□ 0.73
LIME1-202ENST00000444951 SOWAHBA6NEL2 793 aa19.64■□□□□ 0.73
LIME1-202ENST00000444951 FAM205CA6NFA0 338 aa19.64■□□□□ 0.73
LIME1-202ENST00000444951 GHRHRQ02643 423 aa19.64■□□□□ 0.73
LIME1-202ENST00000444951 PIK3AP1Q6ZUJ8 805 aa19.64■□□□□ 0.73
LIME1-202ENST00000444951 SAMD3Q8N6K7 520 aa19.64■□□□□ 0.73
LIME1-202ENST00000444951 FAM133AQ8N9E0 248 aa19.64■□□□□ 0.73
LIME1-202ENST00000444951 LENG1Q96BZ8 264 aaPredicted RBP19.64■□□□□ 0.73
LIME1-202ENST00000444951 MAP3K20Q9NYL2 800 aaKnown RBP19.64■□□□□ 0.73
LIME1-202ENST00000444951 ATP11BQ9Y2G3 1177 aa19.64■□□□□ 0.73
LIME1-202ENST00000444951 DNAJC25-GNG10A0A024R161 153 aa19.63■□□□□ 0.73
LIME1-202ENST00000444951 FOSP01100 380 aaPredicted RBP19.63■□□□□ 0.73
LIME1-202ENST00000444951 MYCLP12524 364 aaPredicted RBP19.63■□□□□ 0.73
LIME1-202ENST00000444951 AP3B2Q13367 1082 aa19.63■□□□□ 0.73
LIME1-202ENST00000444951 LRRC41Q15345 812 aa19.63■□□□□ 0.73
LIME1-202ENST00000444951 EARS2Q5JPH6 523 aaKnown RBP19.63■□□□□ 0.73
LIME1-202ENST00000444951 SLC39A5Q6ZMH5 540 aa19.63■□□□□ 0.73
LIME1-202ENST00000444951 KRT25Q7Z3Z0 450 aa19.63■□□□□ 0.73
LIME1-202ENST00000444951 ARRDC4Q8NCT1 418 aa19.63■□□□□ 0.73
LIME1-202ENST00000444951 ZFP91Q96JP5 570 aaPredicted RBP19.63■□□□□ 0.73
LIME1-202ENST00000444951 EHMT1Q9H9B1 1298 aa19.63■□□□□ 0.73
LIME1-202ENST00000444951 PXMP2Q9NR77 195 aa19.63■□□□□ 0.73
LIME1-202ENST00000444951 SLC5A4Q9NY91 659 aa19.63■□□□□ 0.73
LIME1-202ENST00000444951 KBTBD13C9JR72 458 aa19.62■□□□□ 0.73
LIME1-202ENST00000444951 M0R2N6 131 aa19.62■□□□□ 0.73
LIME1-202ENST00000444951 ATP2B1P20020 1258 aa19.62■□□□□ 0.73
LIME1-202ENST00000444951 ADCYAP1R1P41586 468 aa19.62■□□□□ 0.73
LIME1-202ENST00000444951 NONOQ15233 471 aaKnown RBP eCLIP19.62■□□□□ 0.73
LIME1-202ENST00000444951 INF2Q27J81 1249 aa19.62■□□□□ 0.73
LIME1-202ENST00000444951 NSUN6Q8TEA1 469 aaKnown RBP19.62■□□□□ 0.73
LIME1-202ENST00000444951 FERMT2Q96AC1 680 aa19.62■□□□□ 0.73
LIME1-202ENST00000444951 TINF2Q9BSI4 451 aa19.62■□□□□ 0.73
LIME1-202ENST00000444951 FOXP1Q9H334 677 aaPredicted RBP19.62■□□□□ 0.73
LIME1-202ENST00000444951 ADD3Q9UEY8 706 aaKnown RBP19.62■□□□□ 0.73
LIME1-202ENST00000444951 LCTP09848 1927 aa19.62■□□□□ 0.73
LIME1-202ENST00000444951 A0A0C4DFX4 3053 aa19.62■□□□□ 0.73
LIME1-202ENST00000444951 ASTN1O14525 1302 aa19.61■□□□□ 0.73
LIME1-202ENST00000444951 ZSCAN22P10073 491 aaPredicted RBP19.61■□□□□ 0.73
LIME1-202ENST00000444951 ALDH5A1P51649 535 aaPredicted RBP19.61■□□□□ 0.73
LIME1-202ENST00000444951 TRIM60Q495X7 471 aa19.61■□□□□ 0.73
LIME1-202ENST00000444951 MCTP2Q6DN12 878 aa19.61■□□□□ 0.73
LIME1-202ENST00000444951 NOSTRINQ8IVI9 506 aa19.61■□□□□ 0.73
LIME1-202ENST00000444951 DEFB123Q8N688 67 aa19.61■□□□□ 0.73
LIME1-202ENST00000444951 IL31RAQ8NI17 732 aa19.61■□□□□ 0.73
LIME1-202ENST00000444951 TBCKQ8TEA7 893 aa19.61■□□□□ 0.73
LIME1-202ENST00000444951 TNFRSF25Q93038 417 aa19.61■□□□□ 0.73
LIME1-202ENST00000444951 FGD4Q96M96 766 aa19.61■□□□□ 0.73
LIME1-202ENST00000444951 MAF1Q9H063 256 aa19.61■□□□□ 0.73
LIME1-202ENST00000444951 ZNF865P0CJ78 1059 aaPredicted RBP19.6■□□□□ 0.73
LIME1-202ENST00000444951 U2AF2P26368 475 aaKnown RBP eCLIP19.6■□□□□ 0.731e-9■■■■□ 23
LIME1-202ENST00000444951 PDE4DQ08499 809 aa19.6■□□□□ 0.73
LIME1-202ENST00000444951 SNX17Q15036 470 aa19.6■□□□□ 0.73
LIME1-202ENST00000444951 PGM5Q15124 567 aa19.6■□□□□ 0.73
LIME1-202ENST00000444951 FOXD4L6Q3SYB3 417 aaPredicted RBP19.6■□□□□ 0.73
LIME1-202ENST00000444951 GPR153Q6NV75 609 aa19.6■□□□□ 0.73
LIME1-202ENST00000444951 FOXD4L3Q6VB84 417 aaPredicted RBP19.6■□□□□ 0.73
LIME1-202ENST00000444951 DNERQ8NFT8 737 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms