RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 CCND2P30279 289 aa21.46■■□□□ 1.03
CCDC188-202ENST00000444532 KCNV1Q6PIU1 500 aa21.46■■□□□ 1.03
CCDC188-202ENST00000444532 LBHD1Q9BQE6 289 aaPredicted RBP21.46■■□□□ 1.03
CCDC188-202ENST00000444532 PDLIM7Q9NR12 457 aa21.46■■□□□ 1.03
CCDC188-202ENST00000444532 FRMPD4Q14CM0 1322 aa21.46■■□□□ 1.03
CCDC188-202ENST00000444532 A6NJR5 290 aa21.45■■□□□ 1.02
CCDC188-202ENST00000444532 KPNA6O60684 536 aa21.45■■□□□ 1.02
CCDC188-202ENST00000444532 CLTBP09497 229 aa21.45■■□□□ 1.02
CCDC188-202ENST00000444532 EVCP57679 992 aa21.45■■□□□ 1.02
CCDC188-202ENST00000444532 LY6KQ17RY6 165 aa21.45■■□□□ 1.02
CCDC188-202ENST00000444532 USP17L6PQ6QN14 398 aa21.45■■□□□ 1.02
CCDC188-202ENST00000444532 HEATR3Q7Z4Q2 680 aa21.45■■□□□ 1.02
CCDC188-202ENST00000444532 COPS5Q92905 334 aa21.45■■□□□ 1.02
CCDC188-202ENST00000444532 PRDM5Q9NQX1 630 aaPredicted RBP21.45■■□□□ 1.02
CCDC188-202ENST00000444532 DDX41Q9UJV9 622 aaKnown RBP21.45■■□□□ 1.02
CCDC188-202ENST00000444532 V9GY48 417 aaPredicted RBP21.45■■□□□ 1.02
CCDC188-202ENST00000444532 NID2Q14112 1375 aa21.45■■□□□ 1.02
CCDC188-202ENST00000444532 hCG_1984214I3L0E3 225 aa21.44■■□□□ 1.02
CCDC188-202ENST00000444532 STAM2O75886 525 aa21.44■■□□□ 1.02
CCDC188-202ENST00000444532 GH1P01241 217 aa21.44■■□□□ 1.02
CCDC188-202ENST00000444532 ADD1P35611 737 aaKnown RBP21.44■■□□□ 1.02
CCDC188-202ENST00000444532 TEX2Q8IWB9 1127 aa21.44■■□□□ 1.02
CCDC188-202ENST00000444532 ZNF713Q8N859 430 aaPredicted RBP21.44■■□□□ 1.02
CCDC188-202ENST00000444532 SLC43A3Q8NBI5 491 aa21.44■■□□□ 1.02
CCDC188-202ENST00000444532 IL31RAQ8NI17 732 aa21.44■■□□□ 1.02
CCDC188-202ENST00000444532 MRVI1Q9Y6F6 885 aa21.44■■□□□ 1.02
CCDC188-202ENST00000444532 TRIM43BA6NCK2 446 aa21.43■■□□□ 1.02
CCDC188-202ENST00000444532 RGS20O76081 388 aa21.43■■□□□ 1.02
CCDC188-202ENST00000444532 TGFB3P10600 412 aa21.43■■□□□ 1.02
CCDC188-202ENST00000444532 PURAQ00577 322 aaKnown RBP21.43■■□□□ 1.02
CCDC188-202ENST00000444532 MDM2Q00987 491 aaPredicted RBP21.43■■□□□ 1.02
CCDC188-202ENST00000444532 FAAP100Q0VG06 881 aa21.43■■□□□ 1.02
CCDC188-202ENST00000444532 ITGA7Q13683 1181 aa21.43■■□□□ 1.02
CCDC188-202ENST00000444532 XRRA1Q6P2D8 792 aa21.43■■□□□ 1.02
CCDC188-202ENST00000444532 SH3RF1Q7Z6J0 888 aa21.43■■□□□ 1.02
CCDC188-202ENST00000444532 TRIM43Q96BQ3 446 aaPredicted RBP21.43■■□□□ 1.02
CCDC188-202ENST00000444532 LTBP2Q14767 1821 aa21.43■■□□□ 1.02
CCDC188-202ENST00000444532 KIAA0355O15063 1070 aa21.42■■□□□ 1.02
CCDC188-202ENST00000444532 TLR3O15455 904 aaKnown RBP21.42■■□□□ 1.02
CCDC188-202ENST00000444532 MYL3P08590 195 aa21.42■■□□□ 1.02
CCDC188-202ENST00000444532 ANAPC15P60006 121 aa21.42■■□□□ 1.02
CCDC188-202ENST00000444532 ARHGAP1Q07960 439 aa21.42■■□□□ 1.02
CCDC188-202ENST00000444532 WWC2Q6AWC2 1192 aa21.42■■□□□ 1.02
CCDC188-202ENST00000444532 PPP1R18Q6NYC8 613 aa21.42■■□□□ 1.02
CCDC188-202ENST00000444532 GPKOWQ92917 476 aaPredicted RBP eCLIP21.42■■□□□ 1.02
CCDC188-202ENST00000444532 EMID1Q96A84 441 aaPredicted RBP21.42■■□□□ 1.02
CCDC188-202ENST00000444532 MTG1Q9BT17 334 aaPredicted RBP21.42■■□□□ 1.02
CCDC188-202ENST00000444532 UBE2OQ9C0C9 1292 aaKnown RBP21.42■■□□□ 1.02
CCDC188-202ENST00000444532 TMEM39AQ9NV64 488 aa21.42■■□□□ 1.02
CCDC188-202ENST00000444532 MYH7BA7E2Y1 1941 aa21.41■■□□□ 1.02
CCDC188-202ENST00000444532 GRIN2DO15399 1336 aa21.41■■□□□ 1.02
CCDC188-202ENST00000444532 PDIA3P30101 505 aaKnown RBP21.41■■□□□ 1.02
CCDC188-202ENST00000444532 NAPAP54920 295 aa21.41■■□□□ 1.02
CCDC188-202ENST00000444532 MRPS9P82933 396 aaKnown RBP21.41■■□□□ 1.02
CCDC188-202ENST00000444532 LAMC2Q13753 1193 aa21.41■■□□□ 1.02
CCDC188-202ENST00000444532 TOB2Q14106 344 aaPredicted RBP21.41■■□□□ 1.02
CCDC188-202ENST00000444532 PCNX4Q63HM2 1172 aa21.41■■□□□ 1.02
CCDC188-202ENST00000444532 FAM126BQ8IXS8 530 aa21.41■■□□□ 1.02
CCDC188-202ENST00000444532 BARHL2Q9NY43 387 aa21.41■■□□□ 1.02
CCDC188-202ENST00000444532 GNPTABQ3T906 1256 aa21.4■■□□□ 1.02
CCDC188-202ENST00000444532 DHX37Q8IY37 1157 aaKnown RBP21.4■■□□□ 1.02
CCDC188-202ENST00000444532 AFG1LQ8WV93 481 aa21.4■■□□□ 1.02
CCDC188-202ENST00000444532 ZNF274Q96GC6 653 aaPredicted RBP21.4■■□□□ 1.02
CCDC188-202ENST00000444532 INPP4AQ96PE3 977 aaPredicted RBP21.4■■□□□ 1.02
CCDC188-202ENST00000444532 UPF3BQ9BZI7 483 aaKnown RBP21.4■■□□□ 1.02
CCDC188-202ENST00000444532 GLT8D2Q9H1C3 349 aa21.4■■□□□ 1.02
CCDC188-202ENST00000444532 RIC8AQ9NPQ8 531 aa21.4■■□□□ 1.02
CCDC188-202ENST00000444532 SPDYE3A6NKU9 549 aa21.39■■□□□ 1.01
CCDC188-202ENST00000444532 STXBP3O00186 592 aa21.39■■□□□ 1.01
CCDC188-202ENST00000444532 PRPF3O43395 683 aaKnown RBP21.39■■□□□ 1.01
CCDC188-202ENST00000444532 CD4P01730 458 aa21.39■■□□□ 1.01
CCDC188-202ENST00000444532 RAG1P15918 1043 aa21.39■■□□□ 1.01
CCDC188-202ENST00000444532 PSMC6P62333 389 aa21.39■■□□□ 1.01
CCDC188-202ENST00000444532 PFKFB3Q16875 520 aaPredicted RBP21.39■■□□□ 1.01
CCDC188-202ENST00000444532 BADQ92934 168 aa21.39■■□□□ 1.01
CCDC188-202ENST00000444532 PDRG1Q9NUG6 133 aa21.39■■□□□ 1.01
CCDC188-202ENST00000444532 TBX21Q9UL17 535 aa21.39■■□□□ 1.01
CCDC188-202ENST00000444532 MMP3P08254 477 aa21.38■■□□□ 1.01
CCDC188-202ENST00000444532 SCG2P13521 617 aa21.38■■□□□ 1.01
CCDC188-202ENST00000444532 ICAM3P32942 547 aa21.38■■□□□ 1.01
CCDC188-202ENST00000444532 NTRK3Q16288 839 aa21.38■■□□□ 1.01
CCDC188-202ENST00000444532 DGKDQ16760 1214 aa21.38■■□□□ 1.01
CCDC188-202ENST00000444532 UBE2SQ16763 222 aa21.38■■□□□ 1.01
CCDC188-202ENST00000444532 CELF3Q5SZQ8 465 aaKnown RBP21.38■■□□□ 1.01
CCDC188-202ENST00000444532 MYSM1Q5VVJ2 828 aa21.38■■□□□ 1.01
CCDC188-202ENST00000444532 TYW1BQ6NUM6 668 aa21.38■■□□□ 1.01
CCDC188-202ENST00000444532 TDHQ8IZJ6 230 aa21.38■■□□□ 1.01
CCDC188-202ENST00000444532 PPTC7Q8NI37 304 aa21.38■■□□□ 1.01
CCDC188-202ENST00000444532 ZFP91Q96JP5 570 aaPredicted RBP21.38■■□□□ 1.01
CCDC188-202ENST00000444532 EHMT1Q9H9B1 1298 aa21.38■■□□□ 1.01
CCDC188-202ENST00000444532 PCDH10Q9P2E7 1040 aa21.38■■□□□ 1.01
CCDC188-202ENST00000444532 PCDHA6Q9UN73 950 aa21.38■■□□□ 1.01
CCDC188-202ENST00000444532 PCDHA8Q9Y5H6 950 aa21.38■■□□□ 1.01
CCDC188-202ENST00000444532 TRIOBPQ9H2D6 2365 aa21.38■■□□□ 1.01
CCDC188-202ENST00000444532 SCN10AQ9Y5Y9 1956 aa21.37■■□□□ 1.01
CCDC188-202ENST00000444532 SMCO2A6NFE2 343 aa21.37■■□□□ 1.01
CCDC188-202ENST00000444532 SPATA31C2B4DYI2 1134 aa21.37■■□□□ 1.01
CCDC188-202ENST00000444532 TIMP1P01033 207 aa21.37■■□□□ 1.01
CCDC188-202ENST00000444532 FOSP01100 380 aaPredicted RBP21.37■■□□□ 1.01
CCDC188-202ENST00000444532 IFNAR1P17181 557 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms