RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 TGFB3P10600 412 aa21.73■■□□□ 1.07
ATPAF2-201ENST00000444058 MFSD5Q6N075 450 aa21.73■■□□□ 1.07
ATPAF2-201ENST00000444058 TEX2Q8IWB9 1127 aa21.73■■□□□ 1.07
ATPAF2-201ENST00000444058 FBXL16Q8N461 479 aa21.73■■□□□ 1.07
ATPAF2-201ENST00000444058 PIBF1Q8WXW3 757 aa21.73■■□□□ 1.07
ATPAF2-201ENST00000444058 MRVI1Q9Y6F6 885 aa21.73■■□□□ 1.07
ATPAF2-201ENST00000444058 ZBTB43O43298 467 aa21.72■■□□□ 1.07
ATPAF2-201ENST00000444058 RGS20O76081 388 aa21.72■■□□□ 1.07
ATPAF2-201ENST00000444058 MYL3P08590 195 aa21.72■■□□□ 1.07
ATPAF2-201ENST00000444058 CCND2P30279 289 aa21.72■■□□□ 1.07
ATPAF2-201ENST00000444058 PSMC6P62333 389 aa21.72■■□□□ 1.07
ATPAF2-201ENST00000444058 FPGSQ05932 587 aa21.72■■□□□ 1.07
ATPAF2-201ENST00000444058 ARHGAP1Q07960 439 aa21.72■■□□□ 1.07
ATPAF2-201ENST00000444058 LAMC2Q13753 1193 aa21.72■■□□□ 1.07
ATPAF2-201ENST00000444058 LY6KQ17RY6 165 aa21.72■■□□□ 1.07
ATPAF2-201ENST00000444058 FCHSD1Q86WN1 690 aa21.72■■□□□ 1.07
ATPAF2-201ENST00000444058 CMTR1Q8N1G2 835 aaKnown RBP21.72■■□□□ 1.07
ATPAF2-201ENST00000444058 CUL5Q93034 780 aa21.72■■□□□ 1.07
ATPAF2-201ENST00000444058 LRCH3Q96II8 777 aa21.72■■□□□ 1.07
ATPAF2-201ENST00000444058 BRPF3Q9ULD4 1205 aa21.72■■□□□ 1.07
ATPAF2-201ENST00000444058 SNX14Q9Y5W7 946 aa21.72■■□□□ 1.07
ATPAF2-201ENST00000444058 SZT2Q5T011 3432 aa21.71■■□□□ 1.07
ATPAF2-201ENST00000444058 MYCLP12524 364 aaPredicted RBP21.71■■□□□ 1.07
ATPAF2-201ENST00000444058 PTPN11Q06124 597 aaPredicted RBP21.71■■□□□ 1.07
ATPAF2-201ENST00000444058 SHHQ15465 462 aa21.71■■□□□ 1.07
ATPAF2-201ENST00000444058 XRRA1Q6P2D8 792 aa21.71■■□□□ 1.07
ATPAF2-201ENST00000444058 NFRKBQ6P4R8 1299 aa21.71■■□□□ 1.07
ATPAF2-201ENST00000444058 SMARCC2Q8TAQ2 1214 aa21.71■■□□□ 1.07
ATPAF2-201ENST00000444058 TCEANC2Q96MN5 208 aa21.71■■□□□ 1.07
ATPAF2-201ENST00000444058 ALDH8A1Q9H2A2 487 aaPredicted RBP21.71■■□□□ 1.07
ATPAF2-201ENST00000444058 KIAA1217Q5T5P2 1943 aa21.7■■□□□ 1.07
ATPAF2-201ENST00000444058 MEIS2O14770 477 aa21.7■■□□□ 1.06
ATPAF2-201ENST00000444058 MMP3P08254 477 aa21.7■■□□□ 1.06
ATPAF2-201ENST00000444058 SUPT20HL2P0C7V6 817 aa21.7■■□□□ 1.06
ATPAF2-201ENST00000444058 PSMA5P28066 241 aa21.7■■□□□ 1.06
ATPAF2-201ENST00000444058 RTN1Q16799 776 aa21.7■■□□□ 1.06
ATPAF2-201ENST00000444058 RAB11FIP4Q86YS3 637 aa21.7■■□□□ 1.06
ATPAF2-201ENST00000444058 IL31RAQ8NI17 732 aa21.7■■□□□ 1.06
ATPAF2-201ENST00000444058 AFG1LQ8WV93 481 aa21.7■■□□□ 1.06
ATPAF2-201ENST00000444058 JAKMIP1Q96N16 626 aaKnown RBP21.7■■□□□ 1.06
ATPAF2-201ENST00000444058 PSTPIP2Q9H939 334 aa21.7■■□□□ 1.06
ATPAF2-201ENST00000444058 B4GALT4O60513 344 aa21.69■■□□□ 1.06
ATPAF2-201ENST00000444058 CASTP20810 708 aaKnown RBP21.69■■□□□ 1.06
ATPAF2-201ENST00000444058 FGD1P98174 961 aa21.69■■□□□ 1.06
ATPAF2-201ENST00000444058 FUT2Q10981 343 aa21.69■■□□□ 1.06
ATPAF2-201ENST00000444058 GNPTABQ3T906 1256 aa21.69■■□□□ 1.06
ATPAF2-201ENST00000444058 C9orf50Q5SZB4 431 aa21.69■■□□□ 1.06
ATPAF2-201ENST00000444058 BLOC1S2Q6QNY1 142 aa21.69■■□□□ 1.06
ATPAF2-201ENST00000444058 CCDC82Q8N4S0 544 aa21.69■■□□□ 1.06
ATPAF2-201ENST00000444058 TMEM199Q8N511 208 aa21.69■■□□□ 1.06
ATPAF2-201ENST00000444058 PPTC7Q8NI37 304 aa21.69■■□□□ 1.06
ATPAF2-201ENST00000444058 INPP4AQ96PE3 977 aaPredicted RBP21.69■■□□□ 1.06
ATPAF2-201ENST00000444058 SCN10AQ9Y5Y9 1956 aa21.68■■□□□ 1.06
ATPAF2-201ENST00000444058 KLF18A0A0U1RQI7 1052 aa21.68■■□□□ 1.06
ATPAF2-201ENST00000444058 CCDC196A0A1B0GTZ2 297 aa21.68■■□□□ 1.06
ATPAF2-201ENST00000444058 hCG_1984214I3L0E3 225 aa21.68■■□□□ 1.06
ATPAF2-201ENST00000444058 HOXD8P13378 290 aaPredicted RBP21.68■■□□□ 1.06
ATPAF2-201ENST00000444058 ICAM3P32942 547 aa21.68■■□□□ 1.06
ATPAF2-201ENST00000444058 PPIGQ13427 754 aaKnown RBP eCLIP21.68■■□□□ 1.06
ATPAF2-201ENST00000444058 DGKDQ16760 1214 aa21.68■■□□□ 1.06
ATPAF2-201ENST00000444058 NBPF20Q3BBV1 942 aa21.68■■□□□ 1.06
ATPAF2-201ENST00000444058 MYSM1Q5VVJ2 828 aa21.68■■□□□ 1.06
ATPAF2-201ENST00000444058 PCNX4Q63HM2 1172 aa21.68■■□□□ 1.06
ATPAF2-201ENST00000444058 USP17L6PQ6QN14 398 aa21.68■■□□□ 1.06
ATPAF2-201ENST00000444058 DHX37Q8IY37 1157 aaKnown RBP21.68■■□□□ 1.06
ATPAF2-201ENST00000444058 ZNF713Q8N859 430 aaPredicted RBP21.68■■□□□ 1.06
ATPAF2-201ENST00000444058 AGXT2Q9BYV1 514 aa21.68■■□□□ 1.06
ATPAF2-201ENST00000444058 TRPV6Q9H1D0 765 aa21.68■■□□□ 1.06
ATPAF2-201ENST00000444058 CNTNAP5Q8WYK1 1306 aa21.67■■□□□ 1.06
ATPAF2-201ENST00000444058 PPFIA4O75335 1185 aa21.67■■□□□ 1.06
ATPAF2-201ENST00000444058 RPS6KB1P23443 525 aa21.67■■□□□ 1.06
ATPAF2-201ENST00000444058 EPHB4P54760 987 aa21.67■■□□□ 1.06
ATPAF2-201ENST00000444058 MRPS9P82933 396 aaKnown RBP21.67■■□□□ 1.06
ATPAF2-201ENST00000444058 CELF3Q5SZQ8 465 aaKnown RBP21.67■■□□□ 1.06
ATPAF2-201ENST00000444058 HIPK3Q9H422 1215 aa21.67■■□□□ 1.06
ATPAF2-201ENST00000444058 GOLGA8AA7E2F4 631 aa21.66■■□□□ 1.06
ATPAF2-201ENST00000444058 GOLGA8BA8MQT2 603 aa21.66■■□□□ 1.06
ATPAF2-201ENST00000444058 PPP1R18Q6NYC8 613 aa21.66■■□□□ 1.06
ATPAF2-201ENST00000444058 Q6ZUG5 572 aa21.66■■□□□ 1.06
ATPAF2-201ENST00000444058 SESTD1Q86VW0 696 aa21.66■■□□□ 1.06
ATPAF2-201ENST00000444058 NOC4LQ9BVI4 516 aaKnown RBP21.66■■□□□ 1.06
ATPAF2-201ENST00000444058 PPP1R12CQ9BZL4 782 aa21.66■■□□□ 1.06
ATPAF2-201ENST00000444058 FAM217BQ9NTX9 383 aaPredicted RBP21.66■■□□□ 1.06
ATPAF2-201ENST00000444058 NID2Q14112 1375 aa21.65■■□□□ 1.06
ATPAF2-201ENST00000444058 hCG_1642624A0A1W2PR95 340 aa21.65■■□□□ 1.06
ATPAF2-201ENST00000444058 SPATA31C2B4DYI2 1134 aa21.65■■□□□ 1.06
ATPAF2-201ENST00000444058 UBA1P22314 1058 aaKnown RBP21.65■■□□□ 1.06
ATPAF2-201ENST00000444058 FAM109BQ6ICB4 259 aaPredicted RBP21.65■■□□□ 1.06
ATPAF2-201ENST00000444058 HEATR3Q7Z4Q2 680 aa21.65■■□□□ 1.06
ATPAF2-201ENST00000444058 KAT2BQ92831 832 aa21.65■■□□□ 1.06
ATPAF2-201ENST00000444058 KATNAL1Q9BW62 490 aa21.65■■□□□ 1.06
ATPAF2-201ENST00000444058 USP26Q9BXU7 913 aa21.65■■□□□ 1.06
ATPAF2-201ENST00000444058 TRMT13Q9NUP7 481 aaKnown RBP21.65■■□□□ 1.06
ATPAF2-201ENST00000444058 V9GY48 417 aaPredicted RBP21.65■■□□□ 1.06
ATPAF2-201ENST00000444058 FIBPO43427 364 aa21.64■■□□□ 1.05
ATPAF2-201ENST00000444058 GGPS1O95749 300 aa21.64■■□□□ 1.05
ATPAF2-201ENST00000444058 CPA1P15085 419 aa21.64■■□□□ 1.05
ATPAF2-201ENST00000444058 CSF2RAP15509 400 aa21.64■■□□□ 1.05
ATPAF2-201ENST00000444058 CDC27P30260 824 aa21.64■■□□□ 1.05
ATPAF2-201ENST00000444058 CYP2C18P33260 490 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms