RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 PAWRQ96IZ0 340 aaKnown RBP12.42□□□□□ -0.42
HDAC6-211ENST00000443563 TSEN34Q9BSV6 310 aaKnown RBP12.42□□□□□ -0.42
HDAC6-211ENST00000443563 UPF3AQ9H1J1 476 aaKnown RBP12.42□□□□□ -0.42
HDAC6-211ENST00000443563 PDGFCQ9NRA1 345 aa12.42□□□□□ -0.42
HDAC6-211ENST00000443563 PCDHA6Q9UN73 950 aa12.42□□□□□ -0.42
HDAC6-211ENST00000443563 PCDHA8Q9Y5H6 950 aa12.42□□□□□ -0.42
HDAC6-211ENST00000443563 SYNRGQ9UMZ2 1314 aa12.41□□□□□ -0.42
HDAC6-211ENST00000443563 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.41□□□□□ -0.42
HDAC6-211ENST00000443563 ZEB2O60315 1214 aa12.41□□□□□ -0.42
HDAC6-211ENST00000443563 ADAMTS4O75173 837 aa12.41□□□□□ -0.42
HDAC6-211ENST00000443563 MYCNP04198 464 aaPredicted RBP12.41□□□□□ -0.42
HDAC6-211ENST00000443563 TXNP10599 105 aaKnown RBP12.41□□□□□ -0.42
HDAC6-211ENST00000443563 TGFB3P10600 412 aa12.41□□□□□ -0.42
HDAC6-211ENST00000443563 SMPD1P17405 629 aa12.41□□□□□ -0.42
HDAC6-211ENST00000443563 CST5P28325 142 aaPredicted RBP12.41□□□□□ -0.42
HDAC6-211ENST00000443563 NLRP5P59047 1200 aa12.41□□□□□ -0.42
HDAC6-211ENST00000443563 UBE2SQ16763 222 aa12.41□□□□□ -0.42
HDAC6-211ENST00000443563 BRDTQ58F21 947 aaPredicted RBP12.41□□□□□ -0.42
HDAC6-211ENST00000443563 GJC2Q5T442 439 aaPredicted RBP12.41□□□□□ -0.42
HDAC6-211ENST00000443563 PCNX4Q63HM2 1172 aa12.41□□□□□ -0.42
HDAC6-211ENST00000443563 GALNT17Q6IS24 598 aa12.41□□□□□ -0.42
HDAC6-211ENST00000443563 TYW1BQ6NUM6 668 aa12.41□□□□□ -0.42
HDAC6-211ENST00000443563 SEPT14Q6ZU15 432 aa12.41□□□□□ -0.42
HDAC6-211ENST00000443563 TLK2Q86UE8 772 aa12.41□□□□□ -0.42
HDAC6-211ENST00000443563 NECAB1Q8N987 351 aa12.41□□□□□ -0.42
HDAC6-211ENST00000443563 GNEQ9Y223 722 aaKnown RBP12.41□□□□□ -0.42
HDAC6-211ENST00000443563 DDX49Q9Y6V7 483 aaKnown RBP12.41□□□□□ -0.42
HDAC6-211ENST00000443563 MOXD2PA6NHM9 499 aa12.4□□□□□ -0.42
HDAC6-211ENST00000443563 DYNC1LI2O43237 492 aaPredicted RBP12.4□□□□□ -0.42
HDAC6-211ENST00000443563 PPFIA3O75145 1194 aa12.4□□□□□ -0.42
HDAC6-211ENST00000443563 LARGE1O95461 756 aa12.4□□□□□ -0.42
HDAC6-211ENST00000443563 PGK1P00558 417 aa12.4□□□□□ -0.42
HDAC6-211ENST00000443563 C6orf222P0C671 652 aaPredicted RBP12.4□□□□□ -0.42
HDAC6-211ENST00000443563 CLK2P49760 499 aaKnown RBP12.4□□□□□ -0.42
HDAC6-211ENST00000443563 MNX1P50219 401 aaPredicted RBP12.4□□□□□ -0.42
HDAC6-211ENST00000443563 CPT1AP50416 773 aa12.4□□□□□ -0.42
HDAC6-211ENST00000443563 NKX3-2P78367 333 aa12.4□□□□□ -0.42
HDAC6-211ENST00000443563 NLRX1Q86UT6 975 aa12.4□□□□□ -0.42
HDAC6-211ENST00000443563 REXO1Q8N1G1 1221 aaKnown RBP12.4□□□□□ -0.42
HDAC6-211ENST00000443563 KLHDC9Q8NEP7 349 aa12.4□□□□□ -0.42
HDAC6-211ENST00000443563 CDHR1Q96JP9 859 aa12.4□□□□□ -0.42
HDAC6-211ENST00000443563 LLPHQ9BRT6 129 aaKnown RBP12.4□□□□□ -0.42
HDAC6-211ENST00000443563 VPS54Q9P1Q0 977 aa12.4□□□□□ -0.42
HDAC6-211ENST00000443563 ORC3Q9UBD5 711 aaPredicted RBP12.4□□□□□ -0.42
HDAC6-211ENST00000443563 MRVI1Q9Y6F6 885 aa12.4□□□□□ -0.42
HDAC6-211ENST00000443563 ADCY6O43306 1168 aa12.39□□□□□ -0.43
HDAC6-211ENST00000443563 GH1P01241 217 aa12.39□□□□□ -0.43
HDAC6-211ENST00000443563 COL6A1P12109 1028 aa12.39□□□□□ -0.43
HDAC6-211ENST00000443563 FSCN1Q16658 493 aaKnown RBP12.39□□□□□ -0.43
HDAC6-211ENST00000443563 GNASQ5JWF2 1037 aa12.39□□□□□ -0.43
HDAC6-211ENST00000443563 CCDC62Q6P9F0 684 aa12.39□□□□□ -0.43
HDAC6-211ENST00000443563 OR6J1Q8NGC5 347 aa12.39□□□□□ -0.43
HDAC6-211ENST00000443563 IL31RAQ8NI17 732 aa12.39□□□□□ -0.43
HDAC6-211ENST00000443563 DIS3LQ8TF46 1054 aaKnown RBP12.39□□□□□ -0.43
HDAC6-211ENST00000443563 LENG1Q96BZ8 264 aaPredicted RBP12.39□□□□□ -0.43
HDAC6-211ENST00000443563 INPP4AQ96PE3 977 aaPredicted RBP12.39□□□□□ -0.43
HDAC6-211ENST00000443563 ANO3Q9BYT9 981 aa12.39□□□□□ -0.43
HDAC6-211ENST00000443563 PHF24Q9UPV7 400 aa12.39□□□□□ -0.43
HDAC6-211ENST00000443563 MYH7BA7E2Y1 1941 aa12.39□□□□□ -0.43
HDAC6-211ENST00000443563 MAFGO15525 162 aa12.38□□□□□ -0.43
HDAC6-211ENST00000443563 FIBPO43427 364 aa12.38□□□□□ -0.43
HDAC6-211ENST00000443563 KPNA6O60684 536 aa12.38□□□□□ -0.43
HDAC6-211ENST00000443563 CABYRO75952 493 aa12.38□□□□□ -0.43
HDAC6-211ENST00000443563 CTDNEP1O95476 244 aa12.38□□□□□ -0.43
HDAC6-211ENST00000443563 ICAM3P32942 547 aa12.38□□□□□ -0.43
HDAC6-211ENST00000443563 SREBF1P36956 1147 aa12.38□□□□□ -0.43
HDAC6-211ENST00000443563 ACLYP53396 1101 aa12.38□□□□□ -0.43
HDAC6-211ENST00000443563 MRPS9P82933 396 aaKnown RBP12.38□□□□□ -0.43
HDAC6-211ENST00000443563 HMGN5P82970 282 aaKnown RBP12.38□□□□□ -0.43
HDAC6-211ENST00000443563 LAMC2Q13753 1193 aa12.38□□□□□ -0.43
HDAC6-211ENST00000443563 TRIM29Q14134 588 aa12.38□□□□□ -0.43
HDAC6-211ENST00000443563 KCNA10Q16322 511 aa12.38□□□□□ -0.43
HDAC6-211ENST00000443563 LY6KQ17RY6 165 aa12.38□□□□□ -0.43
HDAC6-211ENST00000443563 CCDC83Q8IWF9 413 aa12.38□□□□□ -0.43
HDAC6-211ENST00000443563 GIMAP8Q8ND71 665 aaPredicted RBP12.38□□□□□ -0.43
HDAC6-211ENST00000443563 NSUN7Q8NE18 718 aaKnown RBP12.38□□□□□ -0.43
HDAC6-211ENST00000443563 GPRASP2Q96D09 838 aa12.38□□□□□ -0.43
HDAC6-211ENST00000443563 GLT1D1Q96MS3 346 aa12.38□□□□□ -0.43
HDAC6-211ENST00000443563 ALG1Q9BT22 464 aa12.38□□□□□ -0.43
HDAC6-211ENST00000443563 SENP6Q9GZR1 1112 aaPredicted RBP12.38□□□□□ -0.43
HDAC6-211ENST00000443563 POLR3EQ9NVU0 708 aa12.38□□□□□ -0.43
HDAC6-211ENST00000443563 DDX41Q9UJV9 622 aaKnown RBP12.38□□□□□ -0.43
HDAC6-211ENST00000443563 PCDHA4Q9UN74 947 aa12.38□□□□□ -0.43
HDAC6-211ENST00000443563 ARIH2O95376 493 aa12.37□□□□□ -0.43
HDAC6-211ENST00000443563 ASGR1P07306 291 aa12.37□□□□□ -0.43
HDAC6-211ENST00000443563 NEDD9Q14511 834 aa12.37□□□□□ -0.43
HDAC6-211ENST00000443563 JAKMIP3Q5VZ66 844 aa12.37□□□□□ -0.43
HDAC6-211ENST00000443563 CCSAPQ6IQ19 270 aaPredicted RBP12.37□□□□□ -0.43
HDAC6-211ENST00000443563 DHX37Q8IY37 1157 aaKnown RBP12.37□□□□□ -0.43
HDAC6-211ENST00000443563 BLIDQ8IZY5 108 aa12.37□□□□□ -0.43
HDAC6-211ENST00000443563 DAGLBQ8NCG7 672 aa12.37□□□□□ -0.43
HDAC6-211ENST00000443563 DPF3Q92784 378 aa12.37□□□□□ -0.43
HDAC6-211ENST00000443563 EMID1Q96A84 441 aaPredicted RBP12.37□□□□□ -0.43
HDAC6-211ENST00000443563 SEZ6LQ9BYH1 1024 aa12.37□□□□□ -0.43
HDAC6-211ENST00000443563 BRMS1Q9HCU9 246 aa12.37□□□□□ -0.43
HDAC6-211ENST00000443563 TMEM260Q9NX78 707 aa12.37□□□□□ -0.43
HDAC6-211ENST00000443563 RTEL1Q9NZ71 1219 aa12.37□□□□□ -0.43
HDAC6-211ENST00000443563 KIF3AQ9Y496 699 aa12.37□□□□□ -0.43
HDAC6-211ENST00000443563 ELP1O95163 1332 aa12.37□□□□□ -0.43
HDAC6-211ENST00000443563 A0A1W2PQ45 241 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms