RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 RCBTB1Q8NDN9 531 aa7.19□□□□□ -1.26
VPS50-206ENST00000443443 ZNF526Q8TF50 670 aaPredicted RBP7.19□□□□□ -1.26
VPS50-206ENST00000443443 DDX11Q96FC9 970 aa7.19□□□□□ -1.26
VPS50-206ENST00000443443 COA3Q9Y2R0 106 aaPredicted RBP7.19□□□□□ -1.26
VPS50-206ENST00000443443 SGSM2O43147 1006 aa7.18□□□□□ -1.26
VPS50-206ENST00000443443 SCG5P05408 212 aa7.18□□□□□ -1.26
VPS50-206ENST00000443443 LTBRP36941 435 aa7.18□□□□□ -1.26
VPS50-206ENST00000443443 GFRA1P56159 465 aa7.18□□□□□ -1.26
VPS50-206ENST00000443443 MROH9Q5TGP6 573 aa7.18□□□□□ -1.26
VPS50-206ENST00000443443 CD300LDQ6UXZ3 194 aa7.18□□□□□ -1.26
VPS50-206ENST00000443443 TP53I13Q8NBR0 393 aaPredicted RBP7.18□□□□□ -1.26
VPS50-206ENST00000443443 CPA5Q8WXQ8 436 aa7.18□□□□□ -1.26
VPS50-206ENST00000443443 SEC14L1Q92503 715 aa7.18□□□□□ -1.26
VPS50-206ENST00000443443 TRIM55Q9BYV6 548 aa7.18□□□□□ -1.26
VPS50-206ENST00000443443 XYLT2Q9H1B5 865 aa7.18□□□□□ -1.26
VPS50-206ENST00000443443 PALD1Q9ULE6 856 aa7.18□□□□□ -1.26
VPS50-206ENST00000443443 A0A1W2PQU0 124 aa7.17□□□□□ -1.26
VPS50-206ENST00000443443 B8ZZF3 427 aa7.17□□□□□ -1.26
VPS50-206ENST00000443443 LCP1P13796 627 aa7.17□□□□□ -1.26
VPS50-206ENST00000443443 SLURP1P55000 103 aa7.17□□□□□ -1.26
VPS50-206ENST00000443443 LSAMPQ13449 338 aa7.17□□□□□ -1.26
VPS50-206ENST00000443443 NFIXQ14938 502 aa7.17□□□□□ -1.26
VPS50-206ENST00000443443 ACBD5Q5T8D3 534 aaPredicted RBP7.17□□□□□ -1.26
VPS50-206ENST00000443443 ETV3LQ6ZN32 361 aa7.17□□□□□ -1.26
VPS50-206ENST00000443443 KCTD13Q8WZ19 329 aa7.17□□□□□ -1.26
VPS50-206ENST00000443443 ZBTB8AQ96BR9 441 aa7.17□□□□□ -1.26
VPS50-206ENST00000443443 NOX5Q96PH1 765 aa7.17□□□□□ -1.26
VPS50-206ENST00000443443 IER2Q9BTL4 223 aa7.17□□□□□ -1.26
VPS50-206ENST00000443443 LUC7LQ9NQ29 371 aaKnown RBP7.17□□□□□ -1.26
VPS50-206ENST00000443443 CLDND1Q9NY35 253 aa7.17□□□□□ -1.26
VPS50-206ENST00000443443 A0A0G2JLL6 359 aaPredicted RBP7.16□□□□□ -1.26
VPS50-206ENST00000443443 IQCA1LA6NCM1 817 aa7.16□□□□□ -1.26
VPS50-206ENST00000443443 KLF4O43474 513 aa7.16□□□□□ -1.26
VPS50-206ENST00000443443 STK10O94804 968 aaKnown RBP7.16□□□□□ -1.26
VPS50-206ENST00000443443 CYP2C8P10632 490 aa7.16□□□□□ -1.26
VPS50-206ENST00000443443 CAP1Q01518 475 aa7.16□□□□□ -1.26
VPS50-206ENST00000443443 SMAD4Q13485 552 aaKnown RBP7.16□□□□□ -1.26
VPS50-206ENST00000443443 HSP90AA2PQ14568 343 aaPredicted RBP7.16□□□□□ -1.26
VPS50-206ENST00000443443 DENND5AQ6IQ26 1287 aa7.16□□□□□ -1.26
VPS50-206ENST00000443443 SAPCD2Q86UD0 394 aa7.16□□□□□ -1.26
VPS50-206ENST00000443443 SPATA25Q9BR10 227 aa7.16□□□□□ -1.26
VPS50-206ENST00000443443 YIPF4Q9BSR8 244 aa7.16□□□□□ -1.26
VPS50-206ENST00000443443 U2SURPO15042 1029 aaKnown RBP7.15□□□□□ -1.26
VPS50-206ENST00000443443 SMARCA5O60264 1052 aaPredicted RBP7.15□□□□□ -1.26
VPS50-206ENST00000443443 ZC3H6P61129 1189 aaKnown RBP7.15□□□□□ -1.26
VPS50-206ENST00000443443 VWA3BQ502W6 1294 aa7.15□□□□□ -1.26
VPS50-206ENST00000443443 NAALADL2Q58DX5 795 aa7.15□□□□□ -1.26
VPS50-206ENST00000443443 TTLL7Q6ZT98 887 aa7.15□□□□□ -1.26
VPS50-206ENST00000443443 USP53Q70EK8 1073 aa7.15□□□□□ -1.26
VPS50-206ENST00000443443 STK32CQ86UX6 486 aa7.15□□□□□ -1.26
VPS50-206ENST00000443443 RIOX2Q8IUF8 465 aa7.15□□□□□ -1.26
VPS50-206ENST00000443443 FAM26EQ8N5C1 309 aa7.15□□□□□ -1.26
VPS50-206ENST00000443443 IGSF5Q9NSI5 407 aa7.15□□□□□ -1.26
VPS50-206ENST00000443443 FBXL7Q9UJT9 491 aa7.15□□□□□ -1.26
VPS50-206ENST00000443443 X6R8D5 127 aa7.15□□□□□ -1.26
VPS50-206ENST00000443443 PRRG2O14669 202 aa7.14□□□□□ -1.27
VPS50-206ENST00000443443 FOXD2O60548 495 aaPredicted RBP7.14□□□□□ -1.27
VPS50-206ENST00000443443 SLC6A11P48066 632 aa7.14□□□□□ -1.27
VPS50-206ENST00000443443 HTRA3P83110 453 aa7.14□□□□□ -1.27
VPS50-206ENST00000443443 RAB33AQ14088 237 aa7.14□□□□□ -1.27
VPS50-206ENST00000443443 SLC35F1Q5T1Q4 408 aa7.14□□□□□ -1.27
VPS50-206ENST00000443443 LIPIQ6XZB0 460 aa7.14□□□□□ -1.27
VPS50-206ENST00000443443 ZC3H18Q86VM9 953 aaKnown RBP7.14□□□□□ -1.27
VPS50-206ENST00000443443 NLRP10Q86W26 655 aa7.14□□□□□ -1.27
VPS50-206ENST00000443443 CKAP2LQ8IYA6 745 aa7.14□□□□□ -1.27
VPS50-206ENST00000443443 SYT3Q9BQG1 590 aa7.14□□□□□ -1.27
VPS50-206ENST00000443443 ADAM7Q9H2U9 754 aa7.14□□□□□ -1.27
VPS50-206ENST00000443443 USP40Q9NVE5 1235 aa7.14□□□□□ -1.27
VPS50-206ENST00000443443 NCANO14594 1321 aa7.13□□□□□ -1.27
VPS50-206ENST00000443443 H7BY64 318 aa7.13□□□□□ -1.27
VPS50-206ENST00000443443 HGSO14964 777 aaPredicted RBP7.13□□□□□ -1.27
VPS50-206ENST00000443443 PRODHO43272 600 aa7.13□□□□□ -1.27
VPS50-206ENST00000443443 DLX3O60479 287 aa7.13□□□□□ -1.27
VPS50-206ENST00000443443 DGKIO75912 1065 aa7.13□□□□□ -1.27
VPS50-206ENST00000443443 C8BP07358 591 aa7.13□□□□□ -1.27
VPS50-206ENST00000443443 STAT5AP42229 794 aa7.13□□□□□ -1.27
VPS50-206ENST00000443443 MAP4K2Q12851 820 aa7.13□□□□□ -1.27
VPS50-206ENST00000443443 CHRNA2Q15822 529 aa7.13□□□□□ -1.27
VPS50-206ENST00000443443 NT5DC1Q5TFE4 455 aa7.13□□□□□ -1.27
VPS50-206ENST00000443443 SGSM3Q96HU1 749 aa7.13□□□□□ -1.27
VPS50-206ENST00000443443 GORASP1Q9BQQ3 440 aa7.13□□□□□ -1.27
VPS50-206ENST00000443443 AARSD1Q9BTE6 412 aaKnown RBP7.13□□□□□ -1.27
VPS50-206ENST00000443443 NTMQ9P121 344 aa7.13□□□□□ -1.27
VPS50-206ENST00000443443 SH3D21A4FU49 640 aa7.12□□□□□ -1.27
VPS50-206ENST00000443443 CCDC85CA6NKD9 419 aa7.12□□□□□ -1.27
VPS50-206ENST00000443443 SARSP49591 514 aaKnown RBP7.12□□□□□ -1.27
VPS50-206ENST00000443443 ERICH6BQ5W0A0 696 aa7.12□□□□□ -1.27
VPS50-206ENST00000443443 STEAP3Q658P3 488 aa7.12□□□□□ -1.27
VPS50-206ENST00000443443 CARFQ8N187 725 aa7.12□□□□□ -1.27
VPS50-206ENST00000443443 C1orf159Q96HA4 380 aa7.12□□□□□ -1.27
VPS50-206ENST00000443443 JAM3Q9BX67 310 aa7.12□□□□□ -1.27
VPS50-206ENST00000443443 TANGO6Q9C0B7 1094 aa7.12□□□□□ -1.27
VPS50-206ENST00000443443 PCDH18Q9HCL0 1135 aa7.12□□□□□ -1.27
VPS50-206ENST00000443443 SPATA6Q9NWH7 488 aaPredicted RBP7.12□□□□□ -1.27
VPS50-206ENST00000443443 RTEL1Q9NZ71 1219 aa7.12□□□□□ -1.27
VPS50-206ENST00000443443 CAPNS1P04632 268 aa7.11□□□□□ -1.27
VPS50-206ENST00000443443 SYN1P17600 705 aa7.11□□□□□ -1.27
VPS50-206ENST00000443443 ATP2B1P20020 1258 aa7.11□□□□□ -1.27
VPS50-206ENST00000443443 NKX3-2P78367 333 aa7.11□□□□□ -1.27
VPS50-206ENST00000443443 TESK1Q15569 626 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms