RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 LY6KQ17RY6 165 aa25.54■■□□□ 1.68
HDLBP-220ENST00000442730 LRIT3Q3SXY7 679 aa25.54■■□□□ 1.68
HDLBP-220ENST00000442730 BRDTQ58F21 947 aaPredicted RBP25.54■■□□□ 1.68
HDLBP-220ENST00000442730 VSIG10LQ86VR7 867 aa25.54■■□□□ 1.68
HDLBP-220ENST00000442730 CCDC82Q8N4S0 544 aa25.54■■□□□ 1.68
HDLBP-220ENST00000442730 RBM28Q9NW13 759 aaKnown RBP25.54■■□□□ 1.68
HDLBP-220ENST00000442730 CNTNAP5Q8WYK1 1306 aa25.54■■□□□ 1.68
HDLBP-220ENST00000442730 PIK3CDO00329 1044 aa25.53■■□□□ 1.68
HDLBP-220ENST00000442730 EPB41L2O43491 1005 aaKnown RBP25.53■■□□□ 1.68
HDLBP-220ENST00000442730 GH1P01241 217 aa25.53■■□□□ 1.68
HDLBP-220ENST00000442730 CD4P01730 458 aa25.53■■□□□ 1.68
HDLBP-220ENST00000442730 RAG1P15918 1043 aa25.53■■□□□ 1.68
HDLBP-220ENST00000442730 RCAN1P53805 252 aa25.53■■□□□ 1.68
HDLBP-220ENST00000442730 RTN1Q16799 776 aa25.53■■□□□ 1.68
HDLBP-220ENST00000442730 MTG1Q9BT17 334 aaPredicted RBP25.53■■□□□ 1.68
HDLBP-220ENST00000442730 SEZ6LQ9BYH1 1024 aa25.53■■□□□ 1.68
HDLBP-220ENST00000442730 DDX41Q9UJV9 622 aaKnown RBP25.53■■□□□ 1.68
HDLBP-220ENST00000442730 MRVI1Q9Y6F6 885 aa25.53■■□□□ 1.68
HDLBP-220ENST00000442730 TLR3O15455 904 aaKnown RBP25.52■■□□□ 1.68
HDLBP-220ENST00000442730 CCND2P30279 289 aa25.52■■□□□ 1.68
HDLBP-220ENST00000442730 FUT2Q10981 343 aa25.52■■□□□ 1.68
HDLBP-220ENST00000442730 BLOC1S2Q6QNY1 142 aa25.52■■□□□ 1.68
HDLBP-220ENST00000442730 AFG1LQ8WV93 481 aa25.52■■□□□ 1.68
HDLBP-220ENST00000442730 LRCH3Q96II8 777 aa25.52■■□□□ 1.68
HDLBP-220ENST00000442730 GOLGA8AA7E2F4 631 aa25.51■■□□□ 1.67
HDLBP-220ENST00000442730 GOLGA8BA8MQT2 603 aa25.51■■□□□ 1.67
HDLBP-220ENST00000442730 MEIS2O14770 477 aa25.51■■□□□ 1.67
HDLBP-220ENST00000442730 TIMP1P01033 207 aa25.51■■□□□ 1.67
HDLBP-220ENST00000442730 RPS6KB1P23443 525 aa25.51■■□□□ 1.67
HDLBP-220ENST00000442730 FGD1P98174 961 aa25.51■■□□□ 1.67
HDLBP-220ENST00000442730 USP17L6PQ6QN14 398 aa25.51■■□□□ 1.67
HDLBP-220ENST00000442730 EMID1Q96A84 441 aaPredicted RBP25.51■■□□□ 1.67
HDLBP-220ENST00000442730 SCN10AQ9Y5Y9 1956 aa25.51■■□□□ 1.67
HDLBP-220ENST00000442730 KPNA6O60684 536 aa25.5■■□□□ 1.67
HDLBP-220ENST00000442730 MMP3P08254 477 aa25.5■■□□□ 1.67
HDLBP-220ENST00000442730 Q6ZUG5 572 aa25.5■■□□□ 1.67
HDLBP-220ENST00000442730 HEATR3Q7Z4Q2 680 aa25.5■■□□□ 1.67
HDLBP-220ENST00000442730 SMARCC2Q8TAQ2 1214 aa25.5■■□□□ 1.67
HDLBP-220ENST00000442730 GPKOWQ92917 476 aaPredicted RBP eCLIP25.5■■□□□ 1.67
HDLBP-220ENST00000442730 CUL5Q93034 780 aa25.5■■□□□ 1.67
HDLBP-220ENST00000442730 FAM217BQ9NTX9 383 aaPredicted RBP25.5■■□□□ 1.67
HDLBP-220ENST00000442730 NID2Q14112 1375 aa25.49■■□□□ 1.67
HDLBP-220ENST00000442730 B4GALT4O60513 344 aa25.49■■□□□ 1.67
HDLBP-220ENST00000442730 EPHB4P54760 987 aa25.49■■□□□ 1.67
HDLBP-220ENST00000442730 FPGSQ05932 587 aa25.49■■□□□ 1.67
HDLBP-220ENST00000442730 APOBRQ0VD83 1088 aa25.49■■□□□ 1.67
HDLBP-220ENST00000442730 C9orf50Q5SZB4 431 aa25.49■■□□□ 1.67
HDLBP-220ENST00000442730 FBXL16Q8N461 479 aa25.49■■□□□ 1.67
HDLBP-220ENST00000442730 BRF1Q92994 677 aa25.49■■□□□ 1.67
HDLBP-220ENST00000442730 ZFP91Q96JP5 570 aaPredicted RBP25.49■■□□□ 1.67
HDLBP-220ENST00000442730 TRPV6Q9H1D0 765 aa25.49■■□□□ 1.67
HDLBP-220ENST00000442730 ALDH8A1Q9H2A2 487 aaPredicted RBP25.49■■□□□ 1.67
HDLBP-220ENST00000442730 PSTPIP2Q9H939 334 aa25.49■■□□□ 1.67
HDLBP-220ENST00000442730 CASTP20810 708 aaKnown RBP25.48■■□□□ 1.67
HDLBP-220ENST00000442730 PSMA5P28066 241 aa25.48■■□□□ 1.67
HDLBP-220ENST00000442730 CDC27P30260 824 aa25.48■■□□□ 1.67
HDLBP-220ENST00000442730 MRPS9P82933 396 aaKnown RBP25.48■■□□□ 1.67
HDLBP-220ENST00000442730 SHHQ15465 462 aa25.48■■□□□ 1.67
HDLBP-220ENST00000442730 WWC2Q6AWC2 1192 aa25.48■■□□□ 1.67
HDLBP-220ENST00000442730 KCNV1Q6PIU1 500 aa25.48■■□□□ 1.67
HDLBP-220ENST00000442730 USP26Q9BXU7 913 aa25.48■■□□□ 1.67
HDLBP-220ENST00000442730 LAMA2P24043 3122 aaKnown RBP25.48■■□□□ 1.67
HDLBP-220ENST00000442730 UBA1P22314 1058 aaKnown RBP25.47■■□□□ 1.67
HDLBP-220ENST00000442730 NBPF20Q3BBV1 942 aa25.47■■□□□ 1.67
HDLBP-220ENST00000442730 MFSD5Q6N075 450 aa25.47■■□□□ 1.67
HDLBP-220ENST00000442730 PPTC7Q8NI37 304 aa25.47■■□□□ 1.67
HDLBP-220ENST00000442730 INPP4AQ96PE3 977 aaPredicted RBP25.47■■□□□ 1.67
HDLBP-220ENST00000442730 AGXT2Q9BYV1 514 aa25.47■■□□□ 1.67
HDLBP-220ENST00000442730 NAP1L2Q9ULW6 460 aaPredicted RBP25.47■■□□□ 1.67
HDLBP-220ENST00000442730 STAM2O75886 525 aa25.46■■□□□ 1.67
HDLBP-220ENST00000442730 METAP2P50579 478 aaKnown RBP eCLIP25.46■■□□□ 1.673e-7■■□□□ 13.2
HDLBP-220ENST00000442730 LAMC2Q13753 1193 aa25.46■■□□□ 1.67
HDLBP-220ENST00000442730 PCNX4Q63HM2 1172 aa25.46■■□□□ 1.67
HDLBP-220ENST00000442730 TYW1BQ6NUM6 668 aa25.46■■□□□ 1.67
HDLBP-220ENST00000442730 NFRKBQ6P4R8 1299 aa25.46■■□□□ 1.67
HDLBP-220ENST00000442730 PPP1R12CQ9BZL4 782 aa25.46■■□□□ 1.67
HDLBP-220ENST00000442730 TRMT13Q9NUP7 481 aaKnown RBP25.46■■□□□ 1.67
HDLBP-220ENST00000442730 TGFB3P10600 412 aa25.45■■□□□ 1.66
HDLBP-220ENST00000442730 SP2Q02086 613 aa25.45■■□□□ 1.66
HDLBP-220ENST00000442730 UBE2SQ16763 222 aa25.45■■□□□ 1.66
HDLBP-220ENST00000442730 MYSM1Q5VVJ2 828 aa25.45■■□□□ 1.66
HDLBP-220ENST00000442730 PPP1R18Q6NYC8 613 aa25.45■■□□□ 1.66
HDLBP-220ENST00000442730 DHX37Q8IY37 1157 aaKnown RBP25.45■■□□□ 1.66
HDLBP-220ENST00000442730 PPP1R13LQ8WUF5 828 aa25.45■■□□□ 1.66
HDLBP-220ENST00000442730 NOC4LQ9BVI4 516 aaKnown RBP25.45■■□□□ 1.66
HDLBP-220ENST00000442730 HIPK3Q9H422 1215 aa25.45■■□□□ 1.66
HDLBP-220ENST00000442730 V9GY48 417 aaPredicted RBP25.45■■□□□ 1.66
HDLBP-220ENST00000442730 GGPS1O95749 300 aa25.44■■□□□ 1.66
HDLBP-220ENST00000442730 HOXD8P13378 290 aaPredicted RBP25.44■■□□□ 1.66
HDLBP-220ENST00000442730 DGKDQ16760 1214 aa25.44■■□□□ 1.66
HDLBP-220ENST00000442730 GNPTABQ3T906 1256 aa25.44■■□□□ 1.66
HDLBP-220ENST00000442730 CELF3Q5SZQ8 465 aaKnown RBP25.44■■□□□ 1.66
HDLBP-220ENST00000442730 XRRA1Q6P2D8 792 aa25.44■■□□□ 1.66
HDLBP-220ENST00000442730 KAT2BQ92831 832 aa25.44■■□□□ 1.66
HDLBP-220ENST00000442730 ZSWIM6Q9HCJ5 1215 aa25.44■■□□□ 1.66
HDLBP-220ENST00000442730 UMODL1Q5DID0 1318 aa25.43■■□□□ 1.66
HDLBP-220ENST00000442730 ICAM3P32942 547 aa25.43■■□□□ 1.66
HDLBP-220ENST00000442730 CYP2C18P33260 490 aa25.43■■□□□ 1.66
HDLBP-220ENST00000442730 ADD1P35611 737 aaKnown RBP25.43■■□□□ 1.66
HDLBP-220ENST00000442730 SEMA3FQ13275 785 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms