RNA–Protein interactions for RNA: ENST00000442714.5

HDLBP-219, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-219ENST00000442714 PPP1R11O60927 126 aaPredicted RBP11.84□□□□□ -0.51
HDLBP-219ENST00000442714 PPFIA4O75335 1185 aa11.84□□□□□ -0.51
HDLBP-219ENST00000442714 RGS20O76081 388 aa11.84□□□□□ -0.51
HDLBP-219ENST00000442714 HSD17B4P51659 736 aa11.84□□□□□ -0.51
HDLBP-219ENST00000442714 LAMC2Q13753 1193 aa11.84□□□□□ -0.51
HDLBP-219ENST00000442714 DGKDQ16760 1214 aa11.84□□□□□ -0.51
HDLBP-219ENST00000442714 ARHGEF16Q5VV41 709 aa11.84□□□□□ -0.51
HDLBP-219ENST00000442714 PPP2R2DQ66LE6 453 aa11.84□□□□□ -0.51
HDLBP-219ENST00000442714 GDF6Q6KF10 455 aaPredicted RBP11.84□□□□□ -0.51
HDLBP-219ENST00000442714 CHST3Q7LGC8 479 aa11.84□□□□□ -0.51
HDLBP-219ENST00000442714 VSIG10LQ86VR7 867 aa11.84□□□□□ -0.51
HDLBP-219ENST00000442714 SAMD3Q8N6K7 520 aa11.84□□□□□ -0.51
HDLBP-219ENST00000442714 AMNQ9BXJ7 453 aa11.84□□□□□ -0.51
HDLBP-219ENST00000442714 FTOQ9C0B1 505 aaKnown RBP eCLIP11.84□□□□□ -0.513e-8■■■■□ 24.2
HDLBP-219ENST00000442714 CNNM2Q9H8M5 875 aa11.84□□□□□ -0.51
HDLBP-219ENST00000442714 PXMP2Q9NR77 195 aa11.84□□□□□ -0.51
HDLBP-219ENST00000442714 MAD2L2Q9UI95 211 aa11.84□□□□□ -0.51
HDLBP-219ENST00000442714 HAS3O00219 553 aa11.83□□□□□ -0.52
HDLBP-219ENST00000442714 TNFRSF10AO00220 468 aa11.83□□□□□ -0.52
HDLBP-219ENST00000442714 RFXAPO00287 272 aa11.83□□□□□ -0.52
HDLBP-219ENST00000442714 CFBP00751 764 aa11.83□□□□□ -0.52
HDLBP-219ENST00000442714 CA3P07451 260 aa11.83□□□□□ -0.52
HDLBP-219ENST00000442714 BMP1P13497 986 aa11.83□□□□□ -0.52
HDLBP-219ENST00000442714 EIF2AK2P19525 551 aaKnown RBP11.83□□□□□ -0.52
HDLBP-219ENST00000442714 CHMP4BP1P59074 171 aa11.83□□□□□ -0.52
HDLBP-219ENST00000442714 RBL2Q08999 1139 aa11.83□□□□□ -0.52
HDLBP-219ENST00000442714 SLC35G1Q2M3R5 365 aa11.83□□□□□ -0.52
HDLBP-219ENST00000442714 MYSM1Q5VVJ2 828 aa11.83□□□□□ -0.52
HDLBP-219ENST00000442714 CYB5R4Q7L1T6 521 aa11.83□□□□□ -0.52
HDLBP-219ENST00000442714 HERC6Q8IVU3 1022 aa11.83□□□□□ -0.52
HDLBP-219ENST00000442714 CAGE1Q8TC20 777 aa11.83□□□□□ -0.52
HDLBP-219ENST00000442714 DHX38Q92620 1227 aaKnown RBP11.83□□□□□ -0.52
HDLBP-219ENST00000442714 SLC9A7Q96T83 725 aa11.83□□□□□ -0.52
HDLBP-219ENST00000442714 UBAC1Q9BSL1 405 aa11.83□□□□□ -0.52
HDLBP-219ENST00000442714 HDAC6Q9UBN7 1215 aa11.83□□□□□ -0.52
HDLBP-219ENST00000442714 NOD1Q9Y239 953 aa11.83□□□□□ -0.52
HDLBP-219ENST00000442714 PCDHA1Q9Y5I3 950 aa11.83□□□□□ -0.52
HDLBP-219ENST00000442714 MTCH2Q9Y6C9 303 aa11.83□□□□□ -0.52
HDLBP-219ENST00000442714 EPOPA6NHQ4 379 aa11.82□□□□□ -0.52
HDLBP-219ENST00000442714 ZBTB5O15062 677 aa11.82□□□□□ -0.52
HDLBP-219ENST00000442714 BAIAP3O94812 1187 aa11.82□□□□□ -0.52
HDLBP-219ENST00000442714 ARHGEF15O94989 841 aa11.82□□□□□ -0.52
HDLBP-219ENST00000442714 CXCL10P02778 98 aa11.82□□□□□ -0.52
HDLBP-219ENST00000442714 TGFB3P10600 412 aa11.82□□□□□ -0.52
HDLBP-219ENST00000442714 HOXD8P13378 290 aaPredicted RBP11.82□□□□□ -0.52
HDLBP-219ENST00000442714 SELPP16109 830 aa11.82□□□□□ -0.52
HDLBP-219ENST00000442714 SP2Q02086 613 aa11.82□□□□□ -0.52
HDLBP-219ENST00000442714 TAP1Q03518 808 aa11.82□□□□□ -0.52
HDLBP-219ENST00000442714 IFIT1BQ5T764 474 aaKnown RBP11.82□□□□□ -0.52
HDLBP-219ENST00000442714 TRAF7Q6Q0C0 670 aa11.82□□□□□ -0.52
HDLBP-219ENST00000442714 PPTC7Q8NI37 304 aa11.82□□□□□ -0.52
HDLBP-219ENST00000442714 AFAP1L1Q8TED9 768 aa11.82□□□□□ -0.52
HDLBP-219ENST00000442714 PDCD2LQ9BRP1 358 aa11.82□□□□□ -0.52
HDLBP-219ENST00000442714 RIOX1Q9H6W3 641 aa11.82□□□□□ -0.52
HDLBP-219ENST00000442714 THEGQ9P2T0 379 aa11.82□□□□□ -0.52
HDLBP-219ENST00000442714 GTF2IRD1Q9UHL9 959 aa11.82□□□□□ -0.52
HDLBP-219ENST00000442714 KIF28PB7ZC32 967 aa11.81□□□□□ -0.52
HDLBP-219ENST00000442714 DHX16O60231 1041 aaKnown RBP11.81□□□□□ -0.52
HDLBP-219ENST00000442714 NBNO60934 754 aa11.81□□□□□ -0.52
HDLBP-219ENST00000442714 PARNO95453 639 aaKnown RBP11.81□□□□□ -0.52
HDLBP-219ENST00000442714 CKBP12277 381 aa11.81□□□□□ -0.52
HDLBP-219ENST00000442714 PDE4AP27815 886 aa11.81□□□□□ -0.52
HDLBP-219ENST00000442714 PSEN2P49810 448 aa11.81□□□□□ -0.52
HDLBP-219ENST00000442714 ZNF200P98182 395 aaPredicted RBP11.81□□□□□ -0.52
HDLBP-219ENST00000442714 HIC1Q14526 733 aa11.81□□□□□ -0.52
HDLBP-219ENST00000442714 TCTN1Q2MV58 587 aa11.81□□□□□ -0.52
HDLBP-219ENST00000442714 TRIM71Q2Q1W2 868 aaKnown RBP11.81□□□□□ -0.52
HDLBP-219ENST00000442714 CELF3Q5SZQ8 465 aaKnown RBP11.81□□□□□ -0.52
HDLBP-219ENST00000442714 KCNV1Q6PIU1 500 aa11.81□□□□□ -0.52
HDLBP-219ENST00000442714 DHX37Q8IY37 1157 aaKnown RBP11.81□□□□□ -0.52
HDLBP-219ENST00000442714 CCDC155Q8N6L0 562 aa11.81□□□□□ -0.52
HDLBP-219ENST00000442714 C7orf31Q8N865 590 aa11.81□□□□□ -0.52
HDLBP-219ENST00000442714 CERS4Q9HA82 394 aa11.81□□□□□ -0.52
HDLBP-219ENST00000442714 MRVI1Q9Y6F6 885 aa11.81□□□□□ -0.52
HDLBP-219ENST00000442714 TRANK1O15050 2925 aa11.81□□□□□ -0.52
HDLBP-219ENST00000442714 CYTH3O43739 400 aa11.8□□□□□ -0.52
HDLBP-219ENST00000442714 CYP21A2P08686 494 aa11.8□□□□□ -0.52
HDLBP-219ENST00000442714 MYCLP12524 364 aaPredicted RBP11.8□□□□□ -0.52
HDLBP-219ENST00000442714 GSPT1P15170 499 aaKnown RBP11.8□□□□□ -0.52
HDLBP-219ENST00000442714 HOXA13P31271 388 aaPredicted RBP11.8□□□□□ -0.52
HDLBP-219ENST00000442714 PTH1RQ03431 593 aa11.8□□□□□ -0.52
HDLBP-219ENST00000442714 TROAPQ12815 778 aa11.8□□□□□ -0.52
HDLBP-219ENST00000442714 PTK7Q13308 1070 aa11.8□□□□□ -0.52
HDLBP-219ENST00000442714 MFSD10Q14728 455 aa11.8□□□□□ -0.52
HDLBP-219ENST00000442714 KIAA0753Q2KHM9 967 aa11.8□□□□□ -0.52
HDLBP-219ENST00000442714 HSDL1Q3SXM5 330 aa11.8□□□□□ -0.52
HDLBP-219ENST00000442714 ADAMTS19Q8TE59 1207 aa11.8□□□□□ -0.52
HDLBP-219ENST00000442714 C16orf70Q9BSU1 422 aa11.8□□□□□ -0.52
HDLBP-219ENST00000442714 ALG1Q9BT22 464 aa11.8□□□□□ -0.52
HDLBP-219ENST00000442714 TSPYL2Q9H2G4 693 aaPredicted RBP11.8□□□□□ -0.52
HDLBP-219ENST00000442714 BCAS3Q9H6U6 928 aa11.8□□□□□ -0.52
HDLBP-219ENST00000442714 SENP2Q9HC62 589 aa11.8□□□□□ -0.52
HDLBP-219ENST00000442714 U3KPZ7 1027 aaPredicted RBP11.8□□□□□ -0.52
HDLBP-219ENST00000442714 XIRP2A4UGR9 3374 aa11.8□□□□□ -0.52
HDLBP-219ENST00000442714 PNMA6FA0A0J9YX94 578 aa11.79□□□□□ -0.52
HDLBP-219ENST00000442714 ABHD14A-ACY1A0A1B0GW23 586 aa11.79□□□□□ -0.52
HDLBP-219ENST00000442714 GCOM1H8Y6P7 765 aaPredicted RBP11.79□□□□□ -0.52
HDLBP-219ENST00000442714 LPXNO60711 386 aa11.79□□□□□ -0.52
HDLBP-219ENST00000442714 F2P00734 622 aa11.79□□□□□ -0.52
HDLBP-219ENST00000442714 POLR2MP0CAP2 368 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms