RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 SMPD1P17405 629 aa18.36■□□□□ 0.53
USP39-205ENST00000442708 CCND2P30279 289 aa18.36■□□□□ 0.53
USP39-205ENST00000442708 IRX5P78411 483 aaPredicted RBP18.36■□□□□ 0.53
USP39-205ENST00000442708 GLT8D2Q9H1C3 349 aa18.36■□□□□ 0.53
USP39-205ENST00000442708 OGDHLQ9ULD0 1010 aa18.36■□□□□ 0.53
USP39-205ENST00000442708 PDE4DIPQ5VU43 2346 aa18.35■□□□□ 0.53
USP39-205ENST00000442708 SPDYE3A6NKU9 549 aa18.35■□□□□ 0.53
USP39-205ENST00000442708 EIF3JO75822 258 aaKnown RBP18.35■□□□□ 0.53
USP39-205ENST00000442708 TFRCP02786 760 aaKnown RBP18.35■□□□□ 0.53
USP39-205ENST00000442708 GNA11P29992 359 aa18.35■□□□□ 0.53
USP39-205ENST00000442708 MNX1P50219 401 aaPredicted RBP18.35■□□□□ 0.53
USP39-205ENST00000442708 TNFAIP2Q03169 654 aa18.35■□□□□ 0.53
USP39-205ENST00000442708 CUL4AQ13619 759 aa18.35■□□□□ 0.53
USP39-205ENST00000442708 PCNX4Q63HM2 1172 aa18.35■□□□□ 0.53
USP39-205ENST00000442708 SEPT14Q6ZU15 432 aa18.35■□□□□ 0.53
USP39-205ENST00000442708 TEX2Q8IWB9 1127 aa18.35■□□□□ 0.53
USP39-205ENST00000442708 BLIDQ8IZY5 108 aa18.35■□□□□ 0.53
USP39-205ENST00000442708 REXO1Q8N1G1 1221 aaKnown RBP18.35■□□□□ 0.53
USP39-205ENST00000442708 DAGLBQ8NCG7 672 aa18.35■□□□□ 0.53
USP39-205ENST00000442708 OXER1Q8TDS5 423 aa18.35■□□□□ 0.53
USP39-205ENST00000442708 WASF1Q92558 559 aa18.35■□□□□ 0.53
USP39-205ENST00000442708 MPHOSPH6Q99547 160 aaKnown RBP18.35■□□□□ 0.53
USP39-205ENST00000442708 RTEL1Q9NZ71 1219 aa18.35■□□□□ 0.53
USP39-205ENST00000442708 PCDHA4Q9UN74 947 aa18.35■□□□□ 0.53
USP39-205ENST00000442708 GNEQ9Y223 722 aaKnown RBP18.35■□□□□ 0.53
USP39-205ENST00000442708 DOCK5Q9H7D0 1870 aa18.35■□□□□ 0.53
USP39-205ENST00000442708 EDIL3O43854 480 aa18.34■□□□□ 0.53
USP39-205ENST00000442708 MSCO60682 206 aa18.34■□□□□ 0.53
USP39-205ENST00000442708 FOSP01100 380 aaPredicted RBP18.34■□□□□ 0.53
USP39-205ENST00000442708 SEMA3FQ13275 785 aa18.34■□□□□ 0.53
USP39-205ENST00000442708 AP3B2Q13367 1082 aa18.34■□□□□ 0.53
USP39-205ENST00000442708 IQSEC1Q6DN90 963 aa18.34■□□□□ 0.53
USP39-205ENST00000442708 CCDC62Q6P9F0 684 aa18.34■□□□□ 0.53
USP39-205ENST00000442708 FAM177A1Q8N128 213 aaPredicted RBP18.34■□□□□ 0.53
USP39-205ENST00000442708 CRYGNQ8WXF5 182 aa18.34■□□□□ 0.53
USP39-205ENST00000442708 COPS5Q92905 334 aa18.34■□□□□ 0.53
USP39-205ENST00000442708 SNX21Q969T3 373 aa18.34■□□□□ 0.53
USP39-205ENST00000442708 WDR11Q9BZH6 1224 aa18.34■□□□□ 0.53
USP39-205ENST00000442708 SYNRGQ9UMZ2 1314 aa18.33■□□□□ 0.53
USP39-205ENST00000442708 PGK1P00558 417 aa18.33■□□□□ 0.52
USP39-205ENST00000442708 RARBP10826 455 aa18.33■□□□□ 0.52
USP39-205ENST00000442708 SREBF1P36956 1147 aa18.33■□□□□ 0.52
USP39-205ENST00000442708 HMGN5P82970 282 aaKnown RBP18.33■□□□□ 0.52
USP39-205ENST00000442708 KRT40Q6A162 431 aa18.33■□□□□ 0.52
USP39-205ENST00000442708 BICD2Q8TD16 824 aa18.33■□□□□ 0.52
USP39-205ENST00000442708 INPP4AQ96PE3 977 aaPredicted RBP18.33■□□□□ 0.52
USP39-205ENST00000442708 XPNPEP3Q9NQH7 507 aa18.33■□□□□ 0.52
USP39-205ENST00000442708 MYADML2A6NDP7 307 aa18.32■□□□□ 0.52
USP39-205ENST00000442708 CTAGE5O15320 804 aa18.32■□□□□ 0.52
USP39-205ENST00000442708 ADAMTS4O75173 837 aa18.32■□□□□ 0.52
USP39-205ENST00000442708 DUSP11O75319 330 aaKnown RBP18.32■□□□□ 0.52
USP39-205ENST00000442708 ITGB5P18084 799 aa18.32■□□□□ 0.52
USP39-205ENST00000442708 ARHGAP4P98171 946 aa18.32■□□□□ 0.52
USP39-205ENST00000442708 GUCY1B3Q02153 619 aa18.32■□□□□ 0.52
USP39-205ENST00000442708 LY6KQ17RY6 165 aa18.32■□□□□ 0.52
USP39-205ENST00000442708 DUSP28Q4G0W2 176 aa18.32■□□□□ 0.52
USP39-205ENST00000442708 XRRA1Q6P2D8 792 aa18.32■□□□□ 0.52
USP39-205ENST00000442708 CYP2W1Q8TAV3 490 aa18.32■□□□□ 0.52
USP39-205ENST00000442708 DIS3LQ8TF46 1054 aaKnown RBP18.32■□□□□ 0.52
USP39-205ENST00000442708 SCFD2Q8WU76 684 aa18.32■□□□□ 0.52
USP39-205ENST00000442708 UPF3AQ9H1J1 476 aaKnown RBP18.32■□□□□ 0.52
USP39-205ENST00000442708 UBIAD1Q9Y5Z9 338 aa18.32■□□□□ 0.52
USP39-205ENST00000442708 K7ELQ4 463 aaPredicted RBP18.31■□□□□ 0.52
USP39-205ENST00000442708 MMP1P03956 469 aa18.31■□□□□ 0.52
USP39-205ENST00000442708 TXNP10599 105 aaKnown RBP18.31■□□□□ 0.52
USP39-205ENST00000442708 XBP1P17861 261 aa18.31■□□□□ 0.52
USP39-205ENST00000442708 SP2Q02086 613 aa18.31■□□□□ 0.52
USP39-205ENST00000442708 NR5A1Q13285 461 aa18.31■□□□□ 0.52
USP39-205ENST00000442708 LRRC41Q15345 812 aa18.31■□□□□ 0.52
USP39-205ENST00000442708 EARS2Q5JPH6 523 aaKnown RBP18.31■□□□□ 0.52
USP39-205ENST00000442708 GALNT17Q6IS24 598 aa18.31■□□□□ 0.52
USP39-205ENST00000442708 UBE2Q1Q7Z7E8 422 aa18.31■□□□□ 0.52
USP39-205ENST00000442708 TNFRSF25Q93038 417 aa18.31■□□□□ 0.52
USP39-205ENST00000442708 BCAS3Q9H6U6 928 aa18.31■□□□□ 0.52
USP39-205ENST00000442708 DDX41Q9UJV9 622 aaKnown RBP18.31■□□□□ 0.52
USP39-205ENST00000442708 FAM205CA6NFA0 338 aa18.3■□□□□ 0.52
USP39-205ENST00000442708 DYNC1LI2O43237 492 aaPredicted RBP18.3■□□□□ 0.52
USP39-205ENST00000442708 GJB2P29033 226 aa18.3■□□□□ 0.52
USP39-205ENST00000442708 GJA9P57773 515 aa18.3■□□□□ 0.52
USP39-205ENST00000442708 MCTP2Q6DN12 878 aa18.3■□□□□ 0.52
USP39-205ENST00000442708 TLK2Q86UE8 772 aa18.3■□□□□ 0.52
USP39-205ENST00000442708 C8orf76Q96K31 380 aa18.3■□□□□ 0.52
USP39-205ENST00000442708 EHMT1Q9H9B1 1298 aa18.3■□□□□ 0.52
USP39-205ENST00000442708 BTBD18B2RXH4 712 aa18.29■□□□□ 0.52
USP39-205ENST00000442708 SPATA31C2B4DYI2 1134 aa18.29■□□□□ 0.52
USP39-205ENST00000442708 STAM2O75886 525 aa18.29■□□□□ 0.52
USP39-205ENST00000442708 MYCNP04198 464 aaPredicted RBP18.29■□□□□ 0.52
USP39-205ENST00000442708 CYP3A4P08684 503 aa18.29■□□□□ 0.52
USP39-205ENST00000442708 ICAM3P32942 547 aa18.29■□□□□ 0.52
USP39-205ENST00000442708 NKX3-2P78367 333 aa18.29■□□□□ 0.52
USP39-205ENST00000442708 BEX3Q00994 111 aa18.29■□□□□ 0.52
USP39-205ENST00000442708 TTLL4Q14679 1199 aa18.29■□□□□ 0.52
USP39-205ENST00000442708 CCSAPQ6IQ19 270 aaPredicted RBP18.29■□□□□ 0.52
USP39-205ENST00000442708 FAM184AQ8NB25 1140 aa18.29■□□□□ 0.52
USP39-205ENST00000442708 KLHDC9Q8NEP7 349 aa18.29■□□□□ 0.52
USP39-205ENST00000442708 FBXO18Q8NFZ0 1043 aa18.29■□□□□ 0.52
USP39-205ENST00000442708 TBCKQ8TEA7 893 aa18.29■□□□□ 0.52
USP39-205ENST00000442708 MXRA8Q9BRK3 442 aa18.29■□□□□ 0.52
USP39-205ENST00000442708 MRVI1Q9Y6F6 885 aa18.29■□□□□ 0.52
USP39-205ENST00000442708 DNAH12Q6ZR08 3092 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms