RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 EHD2Q9NZN4 543 aa11.2□□□□□ -0.62
LIN54-202ENST00000442461 CAPN12Q6ZSI9 719 aa11.19□□□□□ -0.62
LIN54-202ENST00000442461 NUDCD3Q8IVD9 361 aa11.19□□□□□ -0.62
LIN54-202ENST00000442461 ICA1LQ8NDH6 482 aa11.19□□□□□ -0.62
LIN54-202ENST00000442461 PDZD8Q8NEN9 1154 aa11.19□□□□□ -0.62
LIN54-202ENST00000442461 DHTKD1Q96HY7 919 aaPredicted RBP11.19□□□□□ -0.62
LIN54-202ENST00000442461 FAM161BQ96MY7 647 aa11.19□□□□□ -0.62
LIN54-202ENST00000442461 TGS1Q96RS0 853 aaKnown RBP11.19□□□□□ -0.62
LIN54-202ENST00000442461 EFHD1Q9BUP0 239 aa11.19□□□□□ -0.62
LIN54-202ENST00000442461 AZI2Q9H6S1 392 aa11.19□□□□□ -0.62
LIN54-202ENST00000442461 PZPP20742 1482 aa11.19□□□□□ -0.62
LIN54-202ENST00000442461 EVA1CP58658 441 aa11.19□□□□□ -0.62
LIN54-202ENST00000442461 CAVIN4Q5BKX8 364 aa11.19□□□□□ -0.62
LIN54-202ENST00000442461 WAPLQ7Z5K2 1190 aa11.19□□□□□ -0.62
LIN54-202ENST00000442461 OGFOD1Q8N543 542 aa11.19□□□□□ -0.62
LIN54-202ENST00000442461 DTX3LQ8TDB6 740 aa11.19□□□□□ -0.62
LIN54-202ENST00000442461 EDC3Q96F86 508 aaKnown RBP11.19□□□□□ -0.62
LIN54-202ENST00000442461 KDM4CQ9H3R0 1056 aa11.19□□□□□ -0.62
LIN54-202ENST00000442461 MCM8Q9UJA3 840 aa11.19□□□□□ -0.62
LIN54-202ENST00000442461 KIAA0232Q92628 1395 aa11.19□□□□□ -0.62
LIN54-202ENST00000442461 SYNJ2O15056 1496 aa11.19□□□□□ -0.62
LIN54-202ENST00000442461 GRID2IPA4D2P6 1211 aa11.19□□□□□ -0.62
LIN54-202ENST00000442461 CYP21A2P08686 494 aa11.19□□□□□ -0.62
LIN54-202ENST00000442461 HARSP12081 509 aaKnown RBP11.19□□□□□ -0.62
LIN54-202ENST00000442461 BRAFP15056 766 aa11.19□□□□□ -0.62
LIN54-202ENST00000442461 MAN1A1P33908 653 aa11.19□□□□□ -0.62
LIN54-202ENST00000442461 EIF4A2Q14240 407 aaKnown RBP11.19□□□□□ -0.62
LIN54-202ENST00000442461 CCDC14Q49A88 953 aa11.19□□□□□ -0.62
LIN54-202ENST00000442461 HERC4Q5GLZ8 1057 aaPredicted RBP11.19□□□□□ -0.62
LIN54-202ENST00000442461 DYMQ7RTS9 669 aa11.19□□□□□ -0.62
LIN54-202ENST00000442461 PPWD1Q96BP3 646 aaKnown RBP11.19□□□□□ -0.62
LIN54-202ENST00000442461 CATSPER2Q96P56 530 aa11.19□□□□□ -0.62
LIN54-202ENST00000442461 FRMD4BQ9Y2L6 1034 aa11.19□□□□□ -0.62
LIN54-202ENST00000442461 MAP3K5Q99683 1374 aa11.19□□□□□ -0.62
LIN54-202ENST00000442461 IFT140Q96RY7 1462 aa11.19□□□□□ -0.62
LIN54-202ENST00000442461 A0A0G2JND7 137 aa11.18□□□□□ -0.62
LIN54-202ENST00000442461 GPAA1O43292 621 aa11.18□□□□□ -0.62
LIN54-202ENST00000442461 UBTFL6P0CB48 400 aaPredicted RBP11.18□□□□□ -0.62
LIN54-202ENST00000442461 KRT10P13645 584 aa11.18□□□□□ -0.62
LIN54-202ENST00000442461 PSEN1P49768 467 aa11.18□□□□□ -0.62
LIN54-202ENST00000442461 NEK2P51955 445 aa11.18□□□□□ -0.62
LIN54-202ENST00000442461 MRPS9P82933 396 aaKnown RBP11.18□□□□□ -0.62
LIN54-202ENST00000442461 MTHFSDQ2M296 383 aaKnown RBP11.18□□□□□ -0.62
LIN54-202ENST00000442461 ZNF658Q5TYW1 1059 aaPredicted RBP11.18□□□□□ -0.62
LIN54-202ENST00000442461 CYP4F22Q6NT55 531 aa11.18□□□□□ -0.62
LIN54-202ENST00000442461 RAD9BQ6WBX8 426 aa11.18□□□□□ -0.62
LIN54-202ENST00000442461 YTHDF3Q7Z739 585 aaKnown RBP11.18□□□□□ -0.62
LIN54-202ENST00000442461 CABP7Q86V35 215 aa11.18□□□□□ -0.62
LIN54-202ENST00000442461 ARL8AQ96BM9 186 aa11.18□□□□□ -0.62
LIN54-202ENST00000442461 ZMYM6O95789 1325 aa11.18□□□□□ -0.62
LIN54-202ENST00000442461 IQCA1LA6NCM1 817 aa11.18□□□□□ -0.62
LIN54-202ENST00000442461 COPS2P61201 443 aa11.18□□□□□ -0.62
LIN54-202ENST00000442461 PSMC1P62191 440 aaKnown RBP11.18□□□□□ -0.62
LIN54-202ENST00000442461 KLC3Q6P597 504 aa11.18□□□□□ -0.62
LIN54-202ENST00000442461 USP40Q9NVE5 1235 aa11.18□□□□□ -0.62
LIN54-202ENST00000442461 PTPN22Q9Y2R2 807 aa11.18□□□□□ -0.62
LIN54-202ENST00000442461 UBN2Q6ZU65 1347 aa11.18□□□□□ -0.62
LIN54-202ENST00000442461 TCP11X1B4DZS4 312 aa11.18□□□□□ -0.62
LIN54-202ENST00000442461 SUPT3HO75486 399 aa11.18□□□□□ -0.62
LIN54-202ENST00000442461 FAM13AO94988 1023 aa11.18□□□□□ -0.62
LIN54-202ENST00000442461 IFNB1P01574 187 aa11.18□□□□□ -0.62
LIN54-202ENST00000442461 MYBL1P10243 752 aa11.18□□□□□ -0.62
LIN54-202ENST00000442461 PMS2P54278 862 aa11.18□□□□□ -0.62
LIN54-202ENST00000442461 LRRC14Q15048 493 aa11.18□□□□□ -0.62
LIN54-202ENST00000442461 ZCWPW2Q504Y3 356 aa11.18□□□□□ -0.62
LIN54-202ENST00000442461 NANOGNBQ7Z5D8 188 aa11.18□□□□□ -0.62
LIN54-202ENST00000442461 SESTD1Q86VW0 696 aa11.18□□□□□ -0.62
LIN54-202ENST00000442461 HIPK4Q8NE63 616 aa11.18□□□□□ -0.62
LIN54-202ENST00000442461 XAGE3Q8WTP9 111 aa11.18□□□□□ -0.62
LIN54-202ENST00000442461 ANKZF1Q9H8Y5 726 aa11.18□□□□□ -0.62
LIN54-202ENST00000442461 MLXIPLQ9NP71 852 aa11.18□□□□□ -0.62
LIN54-202ENST00000442461 NOS1P29475 1434 aa11.18□□□□□ -0.62
LIN54-202ENST00000442461 GIPC1O14908 333 aa11.18□□□□□ -0.62
LIN54-202ENST00000442461 ACSL3O95573 720 aa11.18□□□□□ -0.62
LIN54-202ENST00000442461 MCF2P10911 925 aa11.18□□□□□ -0.62
LIN54-202ENST00000442461 GHRP10912 638 aa11.18□□□□□ -0.62
LIN54-202ENST00000442461 CHN1P15882 459 aa11.18□□□□□ -0.62
LIN54-202ENST00000442461 TIMM10P62072 90 aa11.18□□□□□ -0.62
LIN54-202ENST00000442461 MAN2A1Q16706 1144 aa11.18□□□□□ -0.62
LIN54-202ENST00000442461 COPS6Q7L5N1 327 aa11.18□□□□□ -0.62
LIN54-202ENST00000442461 TRIM74Q86UV6 250 aa11.18□□□□□ -0.62
LIN54-202ENST00000442461 TRIM73Q86UV7 250 aa11.18□□□□□ -0.62
LIN54-202ENST00000442461 MSL3Q8N5Y2 521 aaKnown RBP11.18□□□□□ -0.62
LIN54-202ENST00000442461 EAF2Q96CJ1 260 aaPredicted RBP11.18□□□□□ -0.62
LIN54-202ENST00000442461 VPS54Q9P1Q0 977 aa11.18□□□□□ -0.62
LIN54-202ENST00000442461 L3MBTL1Q9Y468 752 aa11.18□□□□□ -0.62
LIN54-202ENST00000442461 GRIN2BQ13224 1484 aa11.17□□□□□ -0.62
LIN54-202ENST00000442461 ECEL1O95672 775 aa11.17□□□□□ -0.62
LIN54-202ENST00000442461 HSPA9P38646 679 aaKnown RBP11.17□□□□□ -0.62
LIN54-202ENST00000442461 C10orf76Q5T2E6 689 aa11.17□□□□□ -0.62
LIN54-202ENST00000442461 THAP9Q9H5L6 903 aa11.17□□□□□ -0.62
LIN54-202ENST00000442461 CORO1CQ9ULV4 474 aaPredicted RBP11.17□□□□□ -0.62
LIN54-202ENST00000442461 AGTPBP1Q9UPW5 1226 aa11.17□□□□□ -0.62
LIN54-202ENST00000442461 SNX24Q9Y343 169 aa11.17□□□□□ -0.62
LIN54-202ENST00000442461 EXOC1LA0A1B0GW35 172 aa11.17□□□□□ -0.62
LIN54-202ENST00000442461 PODXLO00592 558 aa11.17□□□□□ -0.62
LIN54-202ENST00000442461 BCRP11274 1271 aa11.17□□□□□ -0.62
LIN54-202ENST00000442461 MMEL1Q495T6 779 aa11.17□□□□□ -0.62
LIN54-202ENST00000442461 MMGT1Q8N4V1 131 aa11.17□□□□□ -0.62
LIN54-202ENST00000442461 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms