RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 CYP3A7P24462 503 aa9.1□□□□□ -0.95
CCDC39-201ENST00000442201 UBA7P41226 1012 aa9.1□□□□□ -0.95
CCDC39-201ENST00000442201 TXKP42681 527 aa9.1□□□□□ -0.95
CCDC39-201ENST00000442201 ZRSR1Q15695 479 aaKnown RBP9.1□□□□□ -0.95
CCDC39-201ENST00000442201 TMEM266Q2M3C6 531 aa9.1□□□□□ -0.95
CCDC39-201ENST00000442201 KANK3Q6NY19 840 aa9.1□□□□□ -0.95
CCDC39-201ENST00000442201 SAMD3Q8N6K7 520 aa9.1□□□□□ -0.95
CCDC39-201ENST00000442201 CLEC4DQ8WXI8 215 aa9.1□□□□□ -0.95
CCDC39-201ENST00000442201 SLC10A4Q96EP9 437 aa9.1□□□□□ -0.95
CCDC39-201ENST00000442201 RAB34Q9BZG1 259 aa9.1□□□□□ -0.95
CCDC39-201ENST00000442201 RBSNQ9H1K0 784 aa9.1□□□□□ -0.95
CCDC39-201ENST00000442201 HOMER2Q9NSB8 354 aa9.1□□□□□ -0.95
CCDC39-201ENST00000442201 NFIBO00712 420 aa9.1□□□□□ -0.95
CCDC39-201ENST00000442201 CCDC172P0C7W6 258 aa9.1□□□□□ -0.95
CCDC39-201ENST00000442201 HSD17B4P51659 736 aa9.1□□□□□ -0.95
CCDC39-201ENST00000442201 FKBP1BP68106 108 aa9.1□□□□□ -0.95
CCDC39-201ENST00000442201 SYCP1Q15431 976 aa9.1□□□□□ -0.95
CCDC39-201ENST00000442201 ELOA2Q8IYF1 753 aaPredicted RBP9.1□□□□□ -0.95
CCDC39-201ENST00000442201 DHX58Q96C10 678 aa9.1□□□□□ -0.95
CCDC39-201ENST00000442201 WNK4Q96J92 1243 aa9.1□□□□□ -0.95
CCDC39-201ENST00000442201 NMRK2Q9NPI5 230 aa9.1□□□□□ -0.95
CCDC39-201ENST00000442201 MAP3K20Q9NYL2 800 aaKnown RBP9.1□□□□□ -0.95
CCDC39-201ENST00000442201 KIAA1468Q9P260 1216 aa9.1□□□□□ -0.95
CCDC39-201ENST00000442201 USP25Q9UHP3 1055 aa9.1□□□□□ -0.95
CCDC39-201ENST00000442201 SERTAD1Q9UHV2 236 aa9.1□□□□□ -0.95
CCDC39-201ENST00000442201 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.09□□□□□ -0.95
CCDC39-201ENST00000442201 SPDYE16A6NNV3 312 aaPredicted RBP9.09□□□□□ -0.95
CCDC39-201ENST00000442201 CIITAP33076 1130 aa9.09□□□□□ -0.95
CCDC39-201ENST00000442201 ZNF76P36508 570 aa9.09□□□□□ -0.95
CCDC39-201ENST00000442201 GHRHRQ02643 423 aa9.09□□□□□ -0.95
CCDC39-201ENST00000442201 FMR1Q06787 632 aaKnown RBP eCLIP9.09□□□□□ -0.95
CCDC39-201ENST00000442201 TREML2Q5T2D2 321 aa9.09□□□□□ -0.95
CCDC39-201ENST00000442201 SNRNP48Q6IEG0 339 aaKnown RBP9.09□□□□□ -0.95
CCDC39-201ENST00000442201 IQUBQ8NA54 791 aa9.09□□□□□ -0.95
CCDC39-201ENST00000442201 REPS2Q8NFH8 660 aa9.09□□□□□ -0.95
CCDC39-201ENST00000442201 RASSF8Q8NHQ8 419 aa9.09□□□□□ -0.95
CCDC39-201ENST00000442201 ZBTB9Q96C00 473 aa9.09□□□□□ -0.95
CCDC39-201ENST00000442201 MBOAT7Q96N66 472 aa9.09□□□□□ -0.95
CCDC39-201ENST00000442201 TRERF1Q96PN7 1200 aa9.09□□□□□ -0.95
CCDC39-201ENST00000442201 TEX13BQ9BXU2 312 aa9.09□□□□□ -0.95
CCDC39-201ENST00000442201 ZNF214Q9UL59 606 aaPredicted RBP9.09□□□□□ -0.95
CCDC39-201ENST00000442201 ATP2A1O14983 1001 aa9.09□□□□□ -0.95
CCDC39-201ENST00000442201 CYP3A4P08684 503 aa9.09□□□□□ -0.95
CCDC39-201ENST00000442201 CDC25AP30304 524 aa9.09□□□□□ -0.95
CCDC39-201ENST00000442201 HOXA7P31268 230 aaPredicted RBP9.09□□□□□ -0.95
CCDC39-201ENST00000442201 TECP42680 631 aa9.09□□□□□ -0.95
CCDC39-201ENST00000442201 FXR2P51116 673 aaKnown RBP eCLIP9.09□□□□□ -0.95
CCDC39-201ENST00000442201 FASTKD5Q7L8L6 764 aaKnown RBP9.09□□□□□ -0.95
CCDC39-201ENST00000442201 CEP57L1Q8IYX8 460 aa9.09□□□□□ -0.95
CCDC39-201ENST00000442201 RNF214Q8ND24 703 aa9.09□□□□□ -0.95
CCDC39-201ENST00000442201 ZNF526Q8TF50 670 aaPredicted RBP9.09□□□□□ -0.95
CCDC39-201ENST00000442201 CCSER1Q9C0I3 900 aa9.09□□□□□ -0.95
CCDC39-201ENST00000442201 GBA2Q9HCG7 927 aaPredicted RBP9.09□□□□□ -0.95
CCDC39-201ENST00000442201 RNF146Q9NTX7 359 aa9.09□□□□□ -0.95
CCDC39-201ENST00000442201 FAM53CQ9NYF3 392 aa9.09□□□□□ -0.95
CCDC39-201ENST00000442201 A0A087X0B3 334 aa9.09□□□□□ -0.95
CCDC39-201ENST00000442201 ACTN4O43707 911 aaKnown RBP9.09□□□□□ -0.95
CCDC39-201ENST00000442201 TMEM132BQ14DG7 1078 aa9.09□□□□□ -0.95
CCDC39-201ENST00000442201 PRR16Q569H4 304 aa9.09□□□□□ -0.95
CCDC39-201ENST00000442201 MUM1L1Q5H9M0 696 aa9.09□□□□□ -0.95
CCDC39-201ENST00000442201 C2orf69Q8N8R5 385 aa9.09□□□□□ -0.95
CCDC39-201ENST00000442201 IGSF22Q8N9C0 903 aa9.09□□□□□ -0.95
CCDC39-201ENST00000442201 ERCC4Q92889 916 aaPredicted RBP9.09□□□□□ -0.95
CCDC39-201ENST00000442201 TTC12Q9H892 705 aaPredicted RBP9.09□□□□□ -0.95
CCDC39-201ENST00000442201 RABGAP1Q9Y3P9 1069 aa9.09□□□□□ -0.95
CCDC39-201ENST00000442201 PP2D1A8MPX8 630 aa9.08□□□□□ -0.96
CCDC39-201ENST00000442201 STAT3P40763 770 aa9.08□□□□□ -0.96
CCDC39-201ENST00000442201 PABPC4Q13310 644 aaKnown RBP eCLIP9.08□□□□□ -0.96
CCDC39-201ENST00000442201 SNAPC2Q13487 334 aa9.08□□□□□ -0.96
CCDC39-201ENST00000442201 PDIA5Q14554 519 aa9.08□□□□□ -0.96
CCDC39-201ENST00000442201 TKFCQ3LXA3 575 aa9.08□□□□□ -0.96
CCDC39-201ENST00000442201 NSMFQ6X4W1 530 aa9.08□□□□□ -0.96
CCDC39-201ENST00000442201 MB21D1Q8N884 522 aa9.08□□□□□ -0.96
CCDC39-201ENST00000442201 ANO10Q9NW15 660 aa9.08□□□□□ -0.96
CCDC39-201ENST00000442201 LRWD1Q9UFC0 647 aa9.08□□□□□ -0.96
CCDC39-201ENST00000442201 DDX41Q9UJV9 622 aaKnown RBP9.08□□□□□ -0.96
CCDC39-201ENST00000442201 PCDHA12Q9UN75 941 aa9.08□□□□□ -0.96
CCDC39-201ENST00000442201 AGTPBP1Q9UPW5 1226 aa9.08□□□□□ -0.96
CCDC39-201ENST00000442201 RIPK3Q9Y572 518 aa9.08□□□□□ -0.96
CCDC39-201ENST00000442201 TBX3O15119 743 aa9.08□□□□□ -0.96
CCDC39-201ENST00000442201 CELF2O95319 508 aaKnown RBP9.08□□□□□ -0.96
CCDC39-201ENST00000442201 RPS6P62753 249 aaKnown RBP9.08□□□□□ -0.96
CCDC39-201ENST00000442201 PLS1Q14651 629 aa9.08□□□□□ -0.96
CCDC39-201ENST00000442201 KARSQ15046 597 aaKnown RBP9.08□□□□□ -0.96
CCDC39-201ENST00000442201 POSTNQ15063 836 aa9.08□□□□□ -0.96
CCDC39-201ENST00000442201 STX1AQ16623 288 aa9.08□□□□□ -0.96
CCDC39-201ENST00000442201 Q4G0T1 1027 aa9.08□□□□□ -0.96
CCDC39-201ENST00000442201 LBX2Q6XYB7 198 aa9.08□□□□□ -0.96
CCDC39-201ENST00000442201 RNF207Q6ZRF8 634 aa9.08□□□□□ -0.96
CCDC39-201ENST00000442201 CABP7Q86V35 215 aa9.08□□□□□ -0.96
CCDC39-201ENST00000442201 SLFN12Q8IYM2 578 aa9.08□□□□□ -0.96
CCDC39-201ENST00000442201 SYTL5Q8TDW5 730 aaPredicted RBP9.08□□□□□ -0.96
CCDC39-201ENST00000442201 HAS1Q92839 578 aa9.08□□□□□ -0.96
CCDC39-201ENST00000442201 KCNMB3Q9NPA1 279 aa9.08□□□□□ -0.96
CCDC39-201ENST00000442201 PAPPA2Q9BXP8 1791 aa9.08□□□□□ -0.96
CCDC39-201ENST00000442201 PHIPQ8WWQ0 1821 aa9.08□□□□□ -0.96
CCDC39-201ENST00000442201 FAM86B1E9PN63 330 aa9.07□□□□□ -0.96
CCDC39-201ENST00000442201 CAVIN2O95810 425 aa9.07□□□□□ -0.96
CCDC39-201ENST00000442201 FAM86B2P0C5J1 330 aa9.07□□□□□ -0.96
CCDC39-201ENST00000442201 PNOCQ13519 176 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms