RNA–Protein interactions for RNA: ENST00000441728.6

UBE2F-215, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,242 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-215ENST00000441728 EIF2AK2P19525 551 aaKnown RBP23.27■■□□□ 1.32
UBE2F-215ENST00000441728 SDSP20132 328 aa23.27■■□□□ 1.32
UBE2F-215ENST00000441728 KCNQ1P51787 676 aa23.27■■□□□ 1.32
UBE2F-215ENST00000441728 GDF6Q6KF10 455 aaPredicted RBP23.27■■□□□ 1.32
UBE2F-215ENST00000441728 CCDC62Q6P9F0 684 aa23.27■■□□□ 1.32
UBE2F-215ENST00000441728 UBAC1Q9BSL1 405 aa23.27■■□□□ 1.32
UBE2F-215ENST00000441728 ALG1Q9BT22 464 aa23.27■■□□□ 1.32
UBE2F-215ENST00000441728 B4E1Z4 1266 aa23.26■■□□□ 1.31
UBE2F-215ENST00000441728 CFBP00751 764 aa23.26■■□□□ 1.31
UBE2F-215ENST00000441728 BMP1P13497 986 aa23.26■■□□□ 1.31
UBE2F-215ENST00000441728 ARHGAP1Q07960 439 aa23.26■■□□□ 1.31
UBE2F-215ENST00000441728 IMMTQ16891 758 aaKnown RBP23.26■■□□□ 1.31
UBE2F-215ENST00000441728 B4GALNT3Q6L9W6 998 aa23.26■■□□□ 1.31
UBE2F-215ENST00000441728 CNKSR3Q6P9H4 555 aa23.26■■□□□ 1.31
UBE2F-215ENST00000441728 SESTD1Q86VW0 696 aa23.26■■□□□ 1.31
UBE2F-215ENST00000441728 HLA-CQ95604 372 aa23.26■■□□□ 1.31
UBE2F-215ENST00000441728 ZSCAN10Q96SZ4 725 aaPredicted RBP23.26■■□□□ 1.31
UBE2F-215ENST00000441728 TCF20Q9UGU0 1960 aaKnown RBP23.26■■□□□ 1.31
UBE2F-215ENST00000441728 HIP1O00291 1037 aa23.25■■□□□ 1.31
UBE2F-215ENST00000441728 EFCAB14O75071 495 aa23.25■■□□□ 1.31
UBE2F-215ENST00000441728 EIF3JO75822 258 aaKnown RBP23.25■■□□□ 1.31
UBE2F-215ENST00000441728 WDR5P61964 334 aaKnown RBP23.25■■□□□ 1.31
UBE2F-215ENST00000441728 LAMC2Q13753 1193 aa23.25■■□□□ 1.31
UBE2F-215ENST00000441728 QRICH1Q2TAL8 776 aa23.25■■□□□ 1.31
UBE2F-215ENST00000441728 CWC27Q6UX04 472 aaKnown RBP23.25■■□□□ 1.31
UBE2F-215ENST00000441728 DHX37Q8IY37 1157 aaKnown RBP23.25■■□□□ 1.31
UBE2F-215ENST00000441728 TBC1D5Q92609 795 aa23.25■■□□□ 1.31
UBE2F-215ENST00000441728 KRT23Q9C075 422 aa23.25■■□□□ 1.31
UBE2F-215ENST00000441728 PSEN2P49810 448 aa23.24■■□□□ 1.31
UBE2F-215ENST00000441728 GRB10Q13322 594 aa23.24■■□□□ 1.31
UBE2F-215ENST00000441728 KRT40Q6A162 431 aa23.24■■□□□ 1.31
UBE2F-215ENST00000441728 RWDD1Q9H446 243 aaPredicted RBP23.24■■□□□ 1.31
UBE2F-215ENST00000441728 HDAC6Q9UBN7 1215 aa23.24■■□□□ 1.31
UBE2F-215ENST00000441728 GTF2IRD1Q9UHL9 959 aa23.24■■□□□ 1.31
UBE2F-215ENST00000441728 CTNNA3Q9UI47 895 aa23.24■■□□□ 1.31
UBE2F-215ENST00000441728 EPOPA6NHQ4 379 aa23.23■■□□□ 1.31
UBE2F-215ENST00000441728 IKBKEQ14164 716 aa23.23■■□□□ 1.31
UBE2F-215ENST00000441728 MFSD10Q14728 455 aa23.23■■□□□ 1.31
UBE2F-215ENST00000441728 AMNQ9BXJ7 453 aa23.23■■□□□ 1.31
UBE2F-215ENST00000441728 CNNM2Q9H8M5 875 aa23.23■■□□□ 1.31
UBE2F-215ENST00000441728 COL20A1Q9P218 1284 aa23.23■■□□□ 1.31
UBE2F-215ENST00000441728 CHD9Q3L8U1 2897 aa23.23■■□□□ 1.31
UBE2F-215ENST00000441728 MYH6P13533 1939 aa23.22■■□□□ 1.31
UBE2F-215ENST00000441728 TRIP12Q14669 1992 aaPredicted RBP23.22■■□□□ 1.31
UBE2F-215ENST00000441728 ABHD14A-ACY1A0A1B0GW23 586 aa23.22■■□□□ 1.31
UBE2F-215ENST00000441728 NR3C2P08235 984 aa23.22■■□□□ 1.31
UBE2F-215ENST00000441728 CKBP12277 381 aa23.22■■□□□ 1.31
UBE2F-215ENST00000441728 MYCLP12524 364 aaPredicted RBP23.22■■□□□ 1.31
UBE2F-215ENST00000441728 KIAA0753Q2KHM9 967 aa23.22■■□□□ 1.31
UBE2F-215ENST00000441728 IFIT1BQ5T764 474 aaKnown RBP23.22■■□□□ 1.31
UBE2F-215ENST00000441728 PXMP2Q9NR77 195 aa23.22■■□□□ 1.31
UBE2F-215ENST00000441728 RAPGEFL1Q9UHV5 662 aa23.22■■□□□ 1.31
UBE2F-215ENST00000441728 DDX41Q9UJV9 622 aaKnown RBP23.22■■□□□ 1.31
UBE2F-215ENST00000441728 MTUS1Q9ULD2 1270 aa23.22■■□□□ 1.31
UBE2F-215ENST00000441728 PRRC2BQ5JSZ5 2229 aaKnown RBP23.21■■□□□ 1.31
UBE2F-215ENST00000441728 ZNF286BP0CG31 522 aa23.21■■□□□ 1.31
UBE2F-215ENST00000441728 PTK7Q13308 1070 aa23.21■■□□□ 1.31
UBE2F-215ENST00000441728 KCNV1Q6PIU1 500 aa23.21■■□□□ 1.31
UBE2F-215ENST00000441728 ENAHQ8N8S7 591 aaPredicted RBP23.21■■□□□ 1.31
UBE2F-215ENST00000441728 PPTC7Q8NI37 304 aa23.21■■□□□ 1.31
UBE2F-215ENST00000441728 ANKS1AQ92625 1134 aa23.21■■□□□ 1.31
UBE2F-215ENST00000441728 KAT2BQ92831 832 aa23.21■■□□□ 1.31
UBE2F-215ENST00000441728 FAM122AQ96E09 287 aa23.21■■□□□ 1.31
UBE2F-215ENST00000441728 RAD9AQ99638 391 aa23.21■■□□□ 1.31
UBE2F-215ENST00000441728 JMJD4Q9H9V9 463 aa23.21■■□□□ 1.31
UBE2F-215ENST00000441728 KIAA1217Q5T5P2 1943 aa23.2■■□□□ 1.3
UBE2F-215ENST00000441728 ARHGEF15O94989 841 aa23.2■■□□□ 1.3
UBE2F-215ENST00000441728 DEFB103AP81534 67 aa23.2■■□□□ 1.3
UBE2F-215ENST00000441728 TRAF1Q13077 416 aa23.2■■□□□ 1.3
UBE2F-215ENST00000441728 AAMPQ13685 434 aa23.2■■□□□ 1.3
UBE2F-215ENST00000441728 FAM117BQ6P1L5 589 aa23.2■■□□□ 1.3
UBE2F-215ENST00000441728 GDPD5Q8WTR4 605 aa23.2■■□□□ 1.3
UBE2F-215ENST00000441728 EMID1Q96A84 441 aaPredicted RBP23.2■■□□□ 1.3
UBE2F-215ENST00000441728 TGS1Q96RS0 853 aaKnown RBP23.2■■□□□ 1.3
UBE2F-215ENST00000441728 ZSWIM5Q9P217 1185 aa23.2■■□□□ 1.3
UBE2F-215ENST00000441728 LAMA4Q16363 1823 aa23.19■■□□□ 1.3
UBE2F-215ENST00000441728 LCHNA4D1U4 455 aa23.19■■□□□ 1.3
UBE2F-215ENST00000441728 RBL2Q08999 1139 aa23.19■■□□□ 1.3
UBE2F-215ENST00000441728 TMCO2Q7Z6W1 182 aaPredicted RBP23.19■■□□□ 1.3
UBE2F-215ENST00000441728 CHD1LQ86WJ1 897 aa23.19■■□□□ 1.3
UBE2F-215ENST00000441728 DHX38Q92620 1227 aaKnown RBP23.19■■□□□ 1.3
UBE2F-215ENST00000441728 SPATA33Q96N06 139 aa23.19■■□□□ 1.3
UBE2F-215ENST00000441728 DSCC1Q9BVC3 393 aa23.19■■□□□ 1.3
UBE2F-215ENST00000441728 LMCD1Q9NZU5 365 aa23.19■■□□□ 1.3
UBE2F-215ENST00000441728 TET1Q8NFU7 2136 aa23.18■■□□□ 1.3
UBE2F-215ENST00000441728 SORBS3O60504 671 aa23.18■■□□□ 1.3
UBE2F-215ENST00000441728 NBNO60934 754 aa23.18■■□□□ 1.3
UBE2F-215ENST00000441728 GJB5O95377 273 aa23.18■■□□□ 1.3
UBE2F-215ENST00000441728 F2P00734 622 aa23.18■■□□□ 1.3
UBE2F-215ENST00000441728 CXCL10P02778 98 aa23.18■■□□□ 1.3
UBE2F-215ENST00000441728 MAP3K20Q9NYL2 800 aaKnown RBP23.18■■□□□ 1.3
UBE2F-215ENST00000441728 EMSYQ7Z589 1322 aa23.17■■□□□ 1.3
UBE2F-215ENST00000441728 KLRF2D3W0D1 207 aa23.17■■□□□ 1.3
UBE2F-215ENST00000441728 TRDNQ13061 729 aa23.17■■□□□ 1.3
UBE2F-215ENST00000441728 HOMER1Q86YM7 354 aa23.17■■□□□ 1.3
UBE2F-215ENST00000441728 MLXIPQ9HAP2 919 aa23.17■■□□□ 1.3
UBE2F-215ENST00000441728 HCN4Q9Y3Q4 1203 aa23.17■■□□□ 1.3
UBE2F-215ENST00000441728 PCDHA1Q9Y5I3 950 aa23.17■■□□□ 1.3
UBE2F-215ENST00000441728 PPFIA4O75335 1185 aa23.16■■□□□ 1.3
UBE2F-215ENST00000441728 LGR5O75473 907 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms