RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 TMBIM4Q9HC24 238 aa8.27□□□□□ -1.08
HDAC9-214ENST00000441542 FAM208AQ9UK61 1670 aaKnown RBP8.27□□□□□ -1.09
HDAC9-214ENST00000441542 H7C1D1 291 aa8.27□□□□□ -1.09
HDAC9-214ENST00000441542 ADAMTS3O15072 1205 aa8.27□□□□□ -1.09
HDAC9-214ENST00000441542 TRAPPC3O43617 180 aa8.27□□□□□ -1.09
HDAC9-214ENST00000441542 GTPBP6O43824 516 aaPredicted RBP8.27□□□□□ -1.09
HDAC9-214ENST00000441542 FCER1AP12319 257 aa8.27□□□□□ -1.09
HDAC9-214ENST00000441542 IFNAR1P17181 557 aa8.27□□□□□ -1.09
HDAC9-214ENST00000441542 XBP1P17861 261 aa8.27□□□□□ -1.09
HDAC9-214ENST00000441542 ERFP50548 548 aa8.27□□□□□ -1.09
HDAC9-214ENST00000441542 DNM2P50570 870 aa8.27□□□□□ -1.09
HDAC9-214ENST00000441542 ERVK-9P63128 1117 aa8.27□□□□□ -1.09
HDAC9-214ENST00000441542 RNASELQ05823 741 aaKnown RBP8.27□□□□□ -1.09
HDAC9-214ENST00000441542 ZNF844Q08AG5 666 aa8.27□□□□□ -1.09
HDAC9-214ENST00000441542 SOGA3Q5TF21 947 aa8.27□□□□□ -1.09
HDAC9-214ENST00000441542 OTUD6AQ7L8S5 288 aa8.27□□□□□ -1.09
HDAC9-214ENST00000441542 YTHDF3Q7Z739 585 aaKnown RBP8.27□□□□□ -1.09
HDAC9-214ENST00000441542 ZNF654Q8IZM8 581 aa8.27□□□□□ -1.09
HDAC9-214ENST00000441542 MAGEB6Q8N7X4 407 aa8.27□□□□□ -1.09
HDAC9-214ENST00000441542 CCDC26Q8TAB7 109 aa8.27□□□□□ -1.09
HDAC9-214ENST00000441542 SPATA20Q8TB22 786 aa8.27□□□□□ -1.09
HDAC9-214ENST00000441542 CAVIN3Q969G5 261 aa8.27□□□□□ -1.09
HDAC9-214ENST00000441542 MTFR1LQ9H019 292 aa8.27□□□□□ -1.09
HDAC9-214ENST00000441542 NEUROG2Q9H2A3 272 aa8.27□□□□□ -1.09
HDAC9-214ENST00000441542 FOXP1Q9H334 677 aaPredicted RBP8.27□□□□□ -1.09
HDAC9-214ENST00000441542 PIDD1Q9HB75 910 aa8.27□□□□□ -1.09
HDAC9-214ENST00000441542 CNNM1Q9NRU3 951 aa8.27□□□□□ -1.09
HDAC9-214ENST00000441542 BIN2Q9UBW5 565 aaPredicted RBP8.27□□□□□ -1.09
HDAC9-214ENST00000441542 AGAP1Q9UPQ3 857 aa8.27□□□□□ -1.09
HDAC9-214ENST00000441542 TMEM2Q9UHN6 1383 aa8.27□□□□□ -1.09
HDAC9-214ENST00000441542 PTPRUQ92729 1446 aa8.27□□□□□ -1.09
HDAC9-214ENST00000441542 CYP2D7A0A087X1C5 515 aa8.27□□□□□ -1.09
HDAC9-214ENST00000441542 A0A1B0GVG6 124 aa8.27□□□□□ -1.09
HDAC9-214ENST00000441542 CCT8L1PA6NM43 557 aa8.27□□□□□ -1.09
HDAC9-214ENST00000441542 A6NNZ2 444 aa8.27□□□□□ -1.09
HDAC9-214ENST00000441542 IGF2BP3O00425 579 aaKnown RBP eCLIP8.27□□□□□ -1.09
HDAC9-214ENST00000441542 SEMA3EO15041 775 aa8.27□□□□□ -1.09
HDAC9-214ENST00000441542 MMEP08473 750 aa8.27□□□□□ -1.09
HDAC9-214ENST00000441542 VEGFAP15692 232 aaPredicted RBP8.27□□□□□ -1.09
HDAC9-214ENST00000441542 KCNA6P17658 529 aa8.27□□□□□ -1.09
HDAC9-214ENST00000441542 MCAMP43121 646 aa8.27□□□□□ -1.09
HDAC9-214ENST00000441542 CTCFP49711 727 aaPredicted RBP8.27□□□□□ -1.09
HDAC9-214ENST00000441542 ALDH5A1P51649 535 aaPredicted RBP8.27□□□□□ -1.09
HDAC9-214ENST00000441542 ADCY2Q08462 1091 aa8.27□□□□□ -1.09
HDAC9-214ENST00000441542 PDE4DQ08499 809 aa8.27□□□□□ -1.09
HDAC9-214ENST00000441542 BYSLQ13895 437 aaKnown RBP8.27□□□□□ -1.09
HDAC9-214ENST00000441542 TUBB8Q3ZCM7 444 aa8.27□□□□□ -1.09
HDAC9-214ENST00000441542 LRRC34Q8IZ02 419 aa8.27□□□□□ -1.09
HDAC9-214ENST00000441542 ANKS4BQ8N8V4 417 aa8.27□□□□□ -1.09
HDAC9-214ENST00000441542 FANCBQ8NB91 859 aa8.27□□□□□ -1.09
HDAC9-214ENST00000441542 PACSIN1Q9BY11 444 aa8.27□□□□□ -1.09
HDAC9-214ENST00000441542 TAF1DQ9H5J8 278 aaPredicted RBP8.27□□□□□ -1.09
HDAC9-214ENST00000441542 NOP53Q9NZM5 478 aaKnown RBP8.27□□□□□ -1.09
HDAC9-214ENST00000441542 SAMD15Q9P1V8 674 aa8.27□□□□□ -1.09
HDAC9-214ENST00000441542 MYO5BQ9ULV0 1848 aa8.27□□□□□ -1.09
HDAC9-214ENST00000441542 USP31Q70CQ4 1352 aa8.26□□□□□ -1.09
HDAC9-214ENST00000441542 UTYO14607 1347 aa8.26□□□□□ -1.09
HDAC9-214ENST00000441542 RASSF10A6NK89 507 aa8.26□□□□□ -1.09
HDAC9-214ENST00000441542 UBOX5O94941 541 aa8.26□□□□□ -1.09
HDAC9-214ENST00000441542 FOXO4P98177 505 aa8.26□□□□□ -1.09
HDAC9-214ENST00000441542 PLCB4Q15147 1175 aa8.26□□□□□ -1.09
HDAC9-214ENST00000441542 GLE1Q53GS7 698 aaKnown RBP8.26□□□□□ -1.09
HDAC9-214ENST00000441542 KLHDC7AQ5VTJ3 777 aa8.26□□□□□ -1.09
HDAC9-214ENST00000441542 LONP2Q86WA8 852 aa8.26□□□□□ -1.09
HDAC9-214ENST00000441542 ANKRD42Q8N9B4 389 aa8.26□□□□□ -1.09
HDAC9-214ENST00000441542 KLHL29Q96CT2 875 aa8.26□□□□□ -1.09
HDAC9-214ENST00000441542 SHISA4Q96DD7 197 aa8.26□□□□□ -1.09
HDAC9-214ENST00000441542 TMEM87BQ96K49 555 aa8.26□□□□□ -1.09
HDAC9-214ENST00000441542 TSC22D3Q99576 134 aa8.26□□□□□ -1.09
HDAC9-214ENST00000441542 TSGA10Q9BZW7 698 aa8.26□□□□□ -1.09
HDAC9-214ENST00000441542 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.26□□□□□ -1.09
HDAC9-214ENST00000441542 AMACRQ9UHK6 382 aa8.26□□□□□ -1.09
HDAC9-214ENST00000441542 TBC1D2BQ9UPU7 963 aa8.26□□□□□ -1.09
HDAC9-214ENST00000441542 TACC3Q9Y6A5 838 aa8.26□□□□□ -1.09
HDAC9-214ENST00000441542 RFX7Q2KHR2 1363 aa8.26□□□□□ -1.09
HDAC9-214ENST00000441542 CEMIPQ8WUJ3 1361 aa8.26□□□□□ -1.09
HDAC9-214ENST00000441542 CHN1P15882 459 aa8.26□□□□□ -1.09
HDAC9-214ENST00000441542 FECHP22830 423 aa8.26□□□□□ -1.09
HDAC9-214ENST00000441542 IGHMBP2P38935 993 aaKnown RBP8.26□□□□□ -1.09
HDAC9-214ENST00000441542 UBA7P41226 1012 aa8.26□□□□□ -1.09
HDAC9-214ENST00000441542 RAPGEF1Q13905 1077 aa8.26□□□□□ -1.09
HDAC9-214ENST00000441542 LRRC41Q15345 812 aa8.26□□□□□ -1.09
HDAC9-214ENST00000441542 ANKRD40Q6AI12 368 aa8.26□□□□□ -1.09
HDAC9-214ENST00000441542 PPP4R3AQ6IN85 833 aa8.26□□□□□ -1.09
HDAC9-214ENST00000441542 ZNF579Q8NAF0 562 aaKnown RBP8.26□□□□□ -1.09
HDAC9-214ENST00000441542 ITFG2Q969R8 447 aa8.26□□□□□ -1.09
HDAC9-214ENST00000441542 CCDC47Q96A33 483 aaKnown RBP8.26□□□□□ -1.09
HDAC9-214ENST00000441542 HOOK2Q96ED9 719 aa8.26□□□□□ -1.09
HDAC9-214ENST00000441542 TRIM51Q9BSJ1 452 aa8.26□□□□□ -1.09
HDAC9-214ENST00000441542 CWC25Q9NXE8 425 aaPredicted RBP8.26□□□□□ -1.09
HDAC9-214ENST00000441542 FOXO6A8MYZ6 492 aa8.25□□□□□ -1.09
HDAC9-214ENST00000441542 ZFYP08048 801 aaPredicted RBP8.25□□□□□ -1.09
HDAC9-214ENST00000441542 ITGA4P13612 1032 aa8.25□□□□□ -1.09
HDAC9-214ENST00000441542 RWDD2BP57060 319 aa8.25□□□□□ -1.09
HDAC9-214ENST00000441542 UAP1Q16222 522 aaPredicted RBP8.25□□□□□ -1.09
HDAC9-214ENST00000441542 DYMQ7RTS9 669 aa8.25□□□□□ -1.09
HDAC9-214ENST00000441542 SH3RF1Q7Z6J0 888 aa8.25□□□□□ -1.09
HDAC9-214ENST00000441542 CHMP6Q96FZ7 201 aa8.25□□□□□ -1.09
HDAC9-214ENST00000441542 PRMT1Q99873 361 aaKnown RBP8.25□□□□□ -1.09
HDAC9-214ENST00000441542 ECT2Q9H8V3 914 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms