RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 TXNP10599 105 aaKnown RBP21.03■□□□□ 0.96
SMPD4-210ENST00000441135 STXBP2Q15833 593 aa21.03■□□□□ 0.96
SMPD4-210ENST00000441135 C9orf50Q5SZB4 431 aa21.03■□□□□ 0.96
SMPD4-210ENST00000441135 ARHGEF16Q5VV41 709 aa21.03■□□□□ 0.96
SMPD4-210ENST00000441135 BRF1Q92994 677 aa21.03■□□□□ 0.96
SMPD4-210ENST00000441135 GOLGA8AA7E2F4 631 aa21.02■□□□□ 0.96
SMPD4-210ENST00000441135 GOLGA8BA8MQT2 603 aa21.02■□□□□ 0.96
SMPD4-210ENST00000441135 OPLAHO14841 1288 aa21.02■□□□□ 0.96
SMPD4-210ENST00000441135 KPNA6O60684 536 aa21.02■□□□□ 0.96
SMPD4-210ENST00000441135 CD4P01730 458 aa21.02■□□□□ 0.96
SMPD4-210ENST00000441135 C8orf34Q49A92 452 aa21.02■□□□□ 0.96
SMPD4-210ENST00000441135 MFSD5Q6N075 450 aa21.02■□□□□ 0.96
SMPD4-210ENST00000441135 TEX2Q8IWB9 1127 aa21.02■□□□□ 0.96
SMPD4-210ENST00000441135 DEFB123Q8N688 67 aa21.02■□□□□ 0.96
SMPD4-210ENST00000441135 METAP2P50579 478 aaKnown RBP eCLIP21.01■□□□□ 0.95
SMPD4-210ENST00000441135 PURAQ00577 322 aaKnown RBP21.01■□□□□ 0.95
SMPD4-210ENST00000441135 APOBRQ0VD83 1088 aa21.01■□□□□ 0.95
SMPD4-210ENST00000441135 FUT2Q10981 343 aa21.01■□□□□ 0.95
SMPD4-210ENST00000441135 CCDC62Q6P9F0 684 aa21.01■□□□□ 0.95
SMPD4-210ENST00000441135 MTG1Q9BT17 334 aaPredicted RBP21.01■□□□□ 0.95
SMPD4-210ENST00000441135 ALDH8A1Q9H2A2 487 aaPredicted RBP21.01■□□□□ 0.95
SMPD4-210ENST00000441135 PXMP2Q9NR77 195 aa21.01■□□□□ 0.95
SMPD4-210ENST00000441135 FAM217BQ9NTX9 383 aaPredicted RBP21.01■□□□□ 0.95
SMPD4-210ENST00000441135 GRIN2DO15399 1336 aa21.01■□□□□ 0.95
SMPD4-210ENST00000441135 CNTNAP5Q8WYK1 1306 aa21.01■□□□□ 0.95
SMPD4-210ENST00000441135 A6NJR5 290 aa21■□□□□ 0.95
SMPD4-210ENST00000441135 EIF3JO75822 258 aaKnown RBP21■□□□□ 0.95
SMPD4-210ENST00000441135 MYL3P08590 195 aa21■□□□□ 0.95
SMPD4-210ENST00000441135 EIF2AK2P19525 551 aaKnown RBP21■□□□□ 0.95
SMPD4-210ENST00000441135 EPHB4P54760 987 aa21■□□□□ 0.95
SMPD4-210ENST00000441135 PPIGQ13427 754 aaKnown RBP eCLIP21■□□□□ 0.953e-6■■■□□ 15.5
SMPD4-210ENST00000441135 FAM109BQ6ICB4 259 aaPredicted RBP21■□□□□ 0.95
SMPD4-210ENST00000441135 RAB11FIP4Q86YS3 637 aa21■□□□□ 0.95
SMPD4-210ENST00000441135 RNPC3Q96LT9 517 aaKnown RBP21■□□□□ 0.95
SMPD4-210ENST00000441135 GCOM1H8Y6P7 765 aaPredicted RBP20.99■□□□□ 0.95
SMPD4-210ENST00000441135 hCG_1984214I3L0E3 225 aa20.99■□□□□ 0.95
SMPD4-210ENST00000441135 ARIH2O95376 493 aa20.99■□□□□ 0.95
SMPD4-210ENST00000441135 NR3C2P08235 984 aa20.99■□□□□ 0.95
SMPD4-210ENST00000441135 POLR2MP0CAP2 368 aa20.99■□□□□ 0.95
SMPD4-210ENST00000441135 PSMC6P62333 389 aa20.99■□□□□ 0.95
SMPD4-210ENST00000441135 TOB2Q14106 344 aaPredicted RBP20.99■□□□□ 0.95
SMPD4-210ENST00000441135 SEPT14Q6ZU15 432 aa20.99■□□□□ 0.95
SMPD4-210ENST00000441135 TMEM199Q8N511 208 aa20.99■□□□□ 0.95
SMPD4-210ENST00000441135 ZNF713Q8N859 430 aaPredicted RBP20.99■□□□□ 0.95
SMPD4-210ENST00000441135 GH1P01241 217 aa20.98■□□□□ 0.95
SMPD4-210ENST00000441135 CDC27P30260 824 aa20.98■□□□□ 0.95
SMPD4-210ENST00000441135 SMAD3P84022 425 aaKnown RBP20.98■□□□□ 0.95
SMPD4-210ENST00000441135 COPS5Q92905 334 aa20.98■□□□□ 0.95
SMPD4-210ENST00000441135 ZNF274Q96GC6 653 aaPredicted RBP20.98■□□□□ 0.95
SMPD4-210ENST00000441135 PDCD2LQ9BRP1 358 aa20.98■□□□□ 0.95
SMPD4-210ENST00000441135 UPF3BQ9BZI7 483 aaKnown RBP20.98■□□□□ 0.95
SMPD4-210ENST00000441135 PPP1R12CQ9BZL4 782 aa20.98■□□□□ 0.95
SMPD4-210ENST00000441135 HIPK3Q9H422 1215 aa20.98■□□□□ 0.95
SMPD4-210ENST00000441135 PDRG1Q9NUG6 133 aa20.98■□□□□ 0.95
SMPD4-210ENST00000441135 PIK3CDO00329 1044 aa20.97■□□□□ 0.95
SMPD4-210ENST00000441135 B4GALT4O60513 344 aa20.97■□□□□ 0.95
SMPD4-210ENST00000441135 SEC24BO95487 1268 aa20.97■□□□□ 0.95
SMPD4-210ENST00000441135 SUPT20HL2P0C7V6 817 aa20.97■□□□□ 0.95
SMPD4-210ENST00000441135 HOXA13P31271 388 aaPredicted RBP20.97■□□□□ 0.95
SMPD4-210ENST00000441135 Q7L0L9 218 aa20.97■□□□□ 0.95
SMPD4-210ENST00000441135 CMTR1Q8N1G2 835 aaKnown RBP20.97■□□□□ 0.95
SMPD4-210ENST00000441135 TRPV6Q9H1D0 765 aa20.97■□□□□ 0.95
SMPD4-210ENST00000441135 PDIA3P30101 505 aaKnown RBP20.96■□□□□ 0.95
SMPD4-210ENST00000441135 ARHGAP1Q07960 439 aa20.96■□□□□ 0.95
SMPD4-210ENST00000441135 PPP1R18Q6NYC8 613 aa20.96■□□□□ 0.95
SMPD4-210ENST00000441135 KCNV1Q6PIU1 500 aa20.96■□□□□ 0.95
SMPD4-210ENST00000441135 MTMR10Q9NXD2 777 aa20.96■□□□□ 0.95
SMPD4-210ENST00000441135 NAP1L2Q9ULW6 460 aaPredicted RBP20.96■□□□□ 0.95
SMPD4-210ENST00000441135 MRVI1Q9Y6F6 885 aa20.96■□□□□ 0.95
SMPD4-210ENST00000441135 CSF2RAP15509 400 aa20.95■□□□□ 0.94
SMPD4-210ENST00000441135 CYP2C18P33260 490 aa20.95■□□□□ 0.94
SMPD4-210ENST00000441135 ANKRD1Q15327 319 aa20.95■□□□□ 0.94
SMPD4-210ENST00000441135 LY6KQ17RY6 165 aa20.95■□□□□ 0.94
SMPD4-210ENST00000441135 ZNF697Q5TEC3 545 aa20.95■□□□□ 0.94
SMPD4-210ENST00000441135 NFRKBQ6P4R8 1299 aa20.95■□□□□ 0.94
SMPD4-210ENST00000441135 PSRC1Q6PGN9 363 aaPredicted RBP20.95■□□□□ 0.94
SMPD4-210ENST00000441135 VSIG10LQ86VR7 867 aa20.95■□□□□ 0.94
SMPD4-210ENST00000441135 AFG1LQ8WV93 481 aa20.95■□□□□ 0.94
SMPD4-210ENST00000441135 PIBF1Q8WXW3 757 aa20.95■□□□□ 0.94
SMPD4-210ENST00000441135 EMID1Q96A84 441 aaPredicted RBP20.95■□□□□ 0.94
SMPD4-210ENST00000441135 NOC4LQ9BVI4 516 aaKnown RBP20.95■□□□□ 0.94
SMPD4-210ENST00000441135 DDX41Q9UJV9 622 aaKnown RBP20.95■□□□□ 0.94
SMPD4-210ENST00000441135 FRMPD4Q14CM0 1322 aa20.95■□□□□ 0.94
SMPD4-210ENST00000441135 MMP3P08254 477 aa20.94■□□□□ 0.94
SMPD4-210ENST00000441135 CCND2P30279 289 aa20.94■□□□□ 0.94
SMPD4-210ENST00000441135 ADD1P35611 737 aaKnown RBP20.94■□□□□ 0.94
SMPD4-210ENST00000441135 PTPN11Q06124 597 aaPredicted RBP20.94■□□□□ 0.94
SMPD4-210ENST00000441135 PGM5Q15124 567 aa20.94■□□□□ 0.94
SMPD4-210ENST00000441135 FCHSD1Q86WN1 690 aa20.94■□□□□ 0.94
SMPD4-210ENST00000441135 CCDC82Q8N4S0 544 aa20.94■□□□□ 0.94
SMPD4-210ENST00000441135 MYCLP12524 364 aaPredicted RBP20.93■□□□□ 0.94
SMPD4-210ENST00000441135 IFNAR1P17181 557 aa20.93■□□□□ 0.94
SMPD4-210ENST00000441135 LAMC2Q13753 1193 aa20.93■□□□□ 0.94
SMPD4-210ENST00000441135 NTRK3Q16288 839 aa20.93■□□□□ 0.94
SMPD4-210ENST00000441135 NBPF20Q3BBV1 942 aa20.93■□□□□ 0.94
SMPD4-210ENST00000441135 FAM47CQ5HY64 1035 aa20.93■□□□□ 0.94
SMPD4-210ENST00000441135 CUL5Q93034 780 aa20.93■□□□□ 0.94
SMPD4-210ENST00000441135 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.93■□□□□ 0.942e-6■□□□□ 10.3
SMPD4-210ENST00000441135 RNF26Q9BY78 433 aaPredicted RBP20.93■□□□□ 0.94
SMPD4-210ENST00000441135 IL23AQ9NPF7 189 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms