RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 TUBE1Q9UJT0 475 aa21.53■■□□□ 1.04
SNX17-203ENST00000440760 LCTP09848 1927 aa21.53■■□□□ 1.04
SNX17-203ENST00000440760 RPTORQ8N122 1335 aa21.52■■□□□ 1.04
SNX17-203ENST00000440760 ATP2A1O14983 1001 aa21.52■■□□□ 1.04
SNX17-203ENST00000440760 PLCG1P19174 1290 aa21.52■■□□□ 1.04
SNX17-203ENST00000440760 STAT3P40763 770 aa21.52■■□□□ 1.04
SNX17-203ENST00000440760 TAAR1Q96RJ0 339 aa21.52■■□□□ 1.04
SNX17-203ENST00000440760 NUDT12Q9BQG2 462 aa21.52■■□□□ 1.04
SNX17-203ENST00000440760 MSH4O15457 936 aa21.52■■□□□ 1.04
SNX17-203ENST00000440760 EIF2AK2P19525 551 aaKnown RBP21.52■■□□□ 1.04
SNX17-203ENST00000440760 BAATQ14032 418 aaPredicted RBP21.52■■□□□ 1.04
SNX17-203ENST00000440760 LBX2Q6XYB7 198 aa21.52■■□□□ 1.04
SNX17-203ENST00000440760 SH3RF1Q7Z6J0 888 aa21.52■■□□□ 1.04
SNX17-203ENST00000440760 FAM200AQ8TCP9 573 aa21.52■■□□□ 1.04
SNX17-203ENST00000440760 MTRQ99707 1265 aa21.52■■□□□ 1.04
SNX17-203ENST00000440760 PAGR1Q9BTK6 254 aa21.52■■□□□ 1.04
SNX17-203ENST00000440760 CBX8Q9HC52 389 aa21.52■■□□□ 1.04
SNX17-203ENST00000440760 PNMA2Q9UL42 364 aa21.52■■□□□ 1.04
SNX17-203ENST00000440760 PCDHA12Q9UN75 941 aa21.52■■□□□ 1.04
SNX17-203ENST00000440760 RRAGBQ5VZM2 374 aa21.51■■□□□ 1.03
SNX17-203ENST00000440760 GPAT2Q6NUI2 795 aa21.51■■□□□ 1.03
SNX17-203ENST00000440760 LUZP1Q86V48 1076 aa21.51■■□□□ 1.03
SNX17-203ENST00000440760 HOOK1Q9UJC3 728 aaKnown RBP21.51■■□□□ 1.03
SNX17-203ENST00000440760 TRPM7Q96QT4 1865 aa21.51■■□□□ 1.03
SNX17-203ENST00000440760 HERVK_113P62684 666 aa21.5■■□□□ 1.03
SNX17-203ENST00000440760 SNAPC2Q13487 334 aa21.5■■□□□ 1.03
SNX17-203ENST00000440760 KANK3Q6NY19 840 aa21.5■■□□□ 1.03
SNX17-203ENST00000440760 ELOA2Q8IYF1 753 aaPredicted RBP21.5■■□□□ 1.03
SNX17-203ENST00000440760 SNX29Q8TEQ0 813 aa21.5■■□□□ 1.03
SNX17-203ENST00000440760 BLZF1Q9H2G9 400 aa21.5■■□□□ 1.03
SNX17-203ENST00000440760 ANO10Q9NW15 660 aa21.5■■□□□ 1.03
SNX17-203ENST00000440760 PLA2G4DQ86XP0 818 aa21.5■■□□□ 1.03
SNX17-203ENST00000440760 C2orf69Q8N8R5 385 aa21.5■■□□□ 1.03
SNX17-203ENST00000440760 RAB34Q9BZG1 259 aa21.5■■□□□ 1.03
SNX17-203ENST00000440760 ACAD9Q9H845 621 aa21.5■■□□□ 1.03
SNX17-203ENST00000440760 CCDC39Q9UFE4 941 aa21.5■■□□□ 1.03
SNX17-203ENST00000440760 USP25Q9UHP3 1055 aa21.5■■□□□ 1.03
SNX17-203ENST00000440760 ZNF165P49910 485 aa21.49■■□□□ 1.03
SNX17-203ENST00000440760 FKBP1BP68106 108 aa21.49■■□□□ 1.03
SNX17-203ENST00000440760 GRB10Q13322 594 aa21.49■■□□□ 1.03
SNX17-203ENST00000440760 CEP55Q53EZ4 464 aa21.49■■□□□ 1.03
SNX17-203ENST00000440760 CST9Q5W186 159 aa21.49■■□□□ 1.03
SNX17-203ENST00000440760 FASTKD5Q7L8L6 764 aaKnown RBP21.49■■□□□ 1.03
SNX17-203ENST00000440760 SLFN12Q8IYM2 578 aa21.49■■□□□ 1.03
SNX17-203ENST00000440760 PYM1Q9BRP8 204 aaKnown RBP21.49■■□□□ 1.03
SNX17-203ENST00000440760 A1CFQ9NQ94 594 aaKnown RBP21.49■■□□□ 1.03
SNX17-203ENST00000440760 MAN1B1Q9UKM7 699 aa21.49■■□□□ 1.03
SNX17-203ENST00000440760 FRMPD4Q14CM0 1322 aa21.49■■□□□ 1.03
SNX17-203ENST00000440760 NLRP12P59046 1061 aa21.48■■□□□ 1.03
SNX17-203ENST00000440760 SPIRE1Q08AE8 756 aa21.48■■□□□ 1.03
SNX17-203ENST00000440760 PDIA5Q14554 519 aa21.48■■□□□ 1.03
SNX17-203ENST00000440760 SMARCE1Q969G3 411 aa21.48■■□□□ 1.03
SNX17-203ENST00000440760 PNMA5Q96PV4 448 aa21.48■■□□□ 1.03
SNX17-203ENST00000440760 RMDN3Q96TC7 470 aa21.48■■□□□ 1.03
SNX17-203ENST00000440760 CNMDO75829 334 aa21.48■■□□□ 1.03
SNX17-203ENST00000440760 ITGBL1O95965 494 aaPredicted RBP21.48■■□□□ 1.03
SNX17-203ENST00000440760 BMP6P22004 513 aa21.48■■□□□ 1.03
SNX17-203ENST00000440760 DPYDQ12882 1025 aa21.48■■□□□ 1.03
SNX17-203ENST00000440760 CUL4BQ13620 913 aa21.48■■□□□ 1.03
SNX17-203ENST00000440760 R3HDMLQ9H3Y0 253 aa21.48■■□□□ 1.03
SNX17-203ENST00000440760 TXNRD2Q9NNW7 524 aa21.48■■□□□ 1.03
SNX17-203ENST00000440760 PXMP2Q9NR77 195 aa21.48■■□□□ 1.03
SNX17-203ENST00000440760 TBX3O15119 743 aa21.47■■□□□ 1.03
SNX17-203ENST00000440760 ARP10275 920 aa21.47■■□□□ 1.03
SNX17-203ENST00000440760 ITGB5P18084 799 aa21.47■■□□□ 1.03
SNX17-203ENST00000440760 MRPS9P82933 396 aaKnown RBP21.47■■□□□ 1.03
SNX17-203ENST00000440760 PGM5Q15124 567 aa21.47■■□□□ 1.03
SNX17-203ENST00000440760 ECM1Q16610 540 aa21.47■■□□□ 1.03
SNX17-203ENST00000440760 KRT79Q5XKE5 535 aa21.47■■□□□ 1.03
SNX17-203ENST00000440760 NCAPH2Q6IBW4 605 aa21.47■■□□□ 1.03
SNX17-203ENST00000440760 CHADLQ6NUI6 762 aa21.47■■□□□ 1.03
SNX17-203ENST00000440760 CALML4Q96GE6 196 aa21.47■■□□□ 1.03
SNX17-203ENST00000440760 SPATC1LQ9H0A9 340 aa21.47■■□□□ 1.03
SNX17-203ENST00000440760 MAP3K20Q9NYL2 800 aaKnown RBP21.47■■□□□ 1.03
SNX17-203ENST00000440760 CYP39A1Q9NYL5 469 aa21.47■■□□□ 1.03
SNX17-203ENST00000440760 VAV3Q9UKW4 847 aa21.47■■□□□ 1.03
SNX17-203ENST00000440760 TKFCQ3LXA3 575 aa21.47■■□□□ 1.03
SNX17-203ENST00000440760 MB21D1Q8N884 522 aa21.47■■□□□ 1.03
SNX17-203ENST00000440760 CCDC34Q96HJ3 373 aa21.47■■□□□ 1.03
SNX17-203ENST00000440760 FAM20AQ96MK3 541 aa21.47■■□□□ 1.03
SNX17-203ENST00000440760 PKD2L1Q9P0L9 805 aa21.47■■□□□ 1.03
SNX17-203ENST00000440760 CYP2C8P10632 490 aa21.46■■□□□ 1.03
SNX17-203ENST00000440760 MYCLP12524 364 aaPredicted RBP21.46■■□□□ 1.03
SNX17-203ENST00000440760 SARSP49591 514 aaKnown RBP21.46■■□□□ 1.03
SNX17-203ENST00000440760 NT5DC1Q5TFE4 455 aa21.46■■□□□ 1.03
SNX17-203ENST00000440760 ARHGEF16Q5VV41 709 aa21.46■■□□□ 1.03
SNX17-203ENST00000440760 PCNX4Q63HM2 1172 aa21.46■■□□□ 1.03
SNX17-203ENST00000440760 KCNK18Q7Z418 384 aa21.46■■□□□ 1.03
SNX17-203ENST00000440760 SPATA20Q8TB22 786 aa21.46■■□□□ 1.03
SNX17-203ENST00000440760 CDK5RAP3Q96JB5 506 aa21.46■■□□□ 1.03
SNX17-203ENST00000440760 MS4A4AQ96JQ5 239 aa21.46■■□□□ 1.03
SNX17-203ENST00000440760 MXRA8Q9BRK3 442 aa21.46■■□□□ 1.03
SNX17-203ENST00000440760 PDCD2LQ9BRP1 358 aa21.46■■□□□ 1.03
SNX17-203ENST00000440760 WDR11Q9BZH6 1224 aa21.46■■□□□ 1.03
SNX17-203ENST00000440760 CCL15-CCL14A0A0B4J2E2 113 aa21.45■■□□□ 1.02
SNX17-203ENST00000440760 UNCXA6NJT0 531 aa21.45■■□□□ 1.02
SNX17-203ENST00000440760 MEIS1O00470 390 aa21.45■■□□□ 1.02
SNX17-203ENST00000440760 DHX8Q14562 1220 aaKnown RBP21.45■■□□□ 1.02
SNX17-203ENST00000440760 CCL15Q16663 113 aa21.45■■□□□ 1.02
SNX17-203ENST00000440760 NCAPG2Q86XI2 1143 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms