RNA–Protein interactions for RNA: ENST00000440437.1

COL16A1-204, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-204ENST00000440437 PPP1R13LQ8WUF5 828 aa19.5■□□□□ 0.71
COL16A1-204ENST00000440437 MYLIPQ8WY64 445 aa19.5■□□□□ 0.71
COL16A1-204ENST00000440437 EMID1Q96A84 441 aaPredicted RBP19.5■□□□□ 0.71
COL16A1-204ENST00000440437 SCLYQ96I15 445 aa19.5■□□□□ 0.71
COL16A1-204ENST00000440437 MAP3K14Q99558 947 aa19.5■□□□□ 0.71
COL16A1-204ENST00000440437 CXXC1Q9P0U4 656 aaPredicted RBP19.5■□□□□ 0.71
COL16A1-204ENST00000440437 UNC80Q8N2C7 3258 aa19.5■□□□□ 0.71
COL16A1-204ENST00000440437 DOCK5Q9H7D0 1870 aa19.5■□□□□ 0.71
COL16A1-204ENST00000440437 GRXCR1A8MXD5 290 aa19.49■□□□□ 0.71
COL16A1-204ENST00000440437 DDAH1O94760 285 aa19.49■□□□□ 0.71
COL16A1-204ENST00000440437 FGBP02675 491 aa19.49■□□□□ 0.71
COL16A1-204ENST00000440437 TRAF1Q13077 416 aa19.49■□□□□ 0.71
COL16A1-204ENST00000440437 PGM5Q15124 567 aa19.49■□□□□ 0.71
COL16A1-204ENST00000440437 ZNF654Q8IZM8 581 aa19.49■□□□□ 0.71
COL16A1-204ENST00000440437 IL31RAQ8NI17 732 aa19.49■□□□□ 0.71
COL16A1-204ENST00000440437 PBX4Q9BYU1 374 aa19.49■□□□□ 0.71
COL16A1-204ENST00000440437 SLC27A2O14975 620 aa19.48■□□□□ 0.71
COL16A1-204ENST00000440437 PRC1O43663 620 aa19.48■□□□□ 0.71
COL16A1-204ENST00000440437 PBX2P40425 430 aa19.48■□□□□ 0.71
COL16A1-204ENST00000440437 NECTIN1Q15223 517 aa19.48■□□□□ 0.71
COL16A1-204ENST00000440437 BMP2KLQ5H9B9 411 aa19.48■□□□□ 0.71
COL16A1-204ENST00000440437 SKAP1Q86WV1 359 aa19.48■□□□□ 0.71
COL16A1-204ENST00000440437 KAT2BQ92831 832 aa19.48■□□□□ 0.71
COL16A1-204ENST00000440437 TIFAQ96CG3 184 aa19.48■□□□□ 0.71
COL16A1-204ENST00000440437 MYL10Q9BUA6 226 aa19.48■□□□□ 0.71
COL16A1-204ENST00000440437 SPZ1Q9BXG8 430 aa19.48■□□□□ 0.71
COL16A1-204ENST00000440437 MRVI1Q9Y6F6 885 aa19.48■□□□□ 0.71
COL16A1-204ENST00000440437 FRMPD4Q14CM0 1322 aa19.48■□□□□ 0.71
COL16A1-204ENST00000440437 PTPRSQ13332 1948 aa19.47■□□□□ 0.71
COL16A1-204ENST00000440437 GCOM1H8Y6P7 765 aaPredicted RBP19.47■□□□□ 0.71
COL16A1-204ENST00000440437 SH2B2O14492 632 aaPredicted RBP19.47■□□□□ 0.71
COL16A1-204ENST00000440437 POLR2MP0CAP2 368 aa19.47■□□□□ 0.71
COL16A1-204ENST00000440437 CASC1Q6TDU7 716 aa19.47■□□□□ 0.71
COL16A1-204ENST00000440437 CENPQQ7L2Z9 268 aaPredicted RBP19.47■□□□□ 0.71
COL16A1-204ENST00000440437 OTOP2Q7RTS6 562 aa19.47■□□□□ 0.71
COL16A1-204ENST00000440437 VSIG10LQ86VR7 867 aa19.47■□□□□ 0.71
COL16A1-204ENST00000440437 SESTD1Q86VW0 696 aa19.47■□□□□ 0.71
COL16A1-204ENST00000440437 RPUSD2Q8IZ73 545 aaKnown RBP19.47■□□□□ 0.71
COL16A1-204ENST00000440437 TMEM87BQ96K49 555 aa19.47■□□□□ 0.71
COL16A1-204ENST00000440437 MTIF3Q9H2K0 278 aaKnown RBP19.47■□□□□ 0.71
COL16A1-204ENST00000440437 TET1Q8NFU7 2136 aa19.46■□□□□ 0.71
COL16A1-204ENST00000440437 PITPNM1O00562 1244 aa19.46■□□□□ 0.71
COL16A1-204ENST00000440437 PFKMP08237 780 aa19.46■□□□□ 0.71
COL16A1-204ENST00000440437 MYCLP12524 364 aaPredicted RBP19.46■□□□□ 0.71
COL16A1-204ENST00000440437 HOXD8P13378 290 aaPredicted RBP19.46■□□□□ 0.71
COL16A1-204ENST00000440437 CASTP20810 708 aaKnown RBP19.46■□□□□ 0.71
COL16A1-204ENST00000440437 MCM5P33992 734 aa19.46■□□□□ 0.71
COL16A1-204ENST00000440437 GRIN2CQ14957 1233 aa19.46■□□□□ 0.71
COL16A1-204ENST00000440437 DGKDQ16760 1214 aa19.46■□□□□ 0.71
COL16A1-204ENST00000440437 CREB3L3Q68CJ9 461 aa19.46■□□□□ 0.71
COL16A1-204ENST00000440437 PPTC7Q8NI37 304 aa19.46■□□□□ 0.71
COL16A1-204ENST00000440437 CTCFLQ8NI51 663 aaPredicted RBP19.46■□□□□ 0.71
COL16A1-204ENST00000440437 CTAGE1Q96RT6 745 aa19.46■□□□□ 0.71
COL16A1-204ENST00000440437 ZNF576Q9H609 170 aa19.46■□□□□ 0.71
COL16A1-204ENST00000440437 CHD9Q3L8U1 2897 aa19.46■□□□□ 0.71
COL16A1-204ENST00000440437 SMARCA1P28370 1054 aa19.45■□□□□ 0.7
COL16A1-204ENST00000440437 CCND2P30279 289 aa19.45■□□□□ 0.7
COL16A1-204ENST00000440437 KIF5BP33176 963 aa19.45■□□□□ 0.7
COL16A1-204ENST00000440437 LAMC2Q13753 1193 aa19.45■□□□□ 0.7
COL16A1-204ENST00000440437 KCNV1Q6PIU1 500 aa19.45■□□□□ 0.7
COL16A1-204ENST00000440437 MAFAQ8NHW3 353 aaPredicted RBP19.45■□□□□ 0.7
COL16A1-204ENST00000440437 ANO2Q9NQ90 1003 aa19.45■□□□□ 0.7
COL16A1-204ENST00000440437 HAS3O00219 553 aa19.44■□□□□ 0.7
COL16A1-204ENST00000440437 PLEKHA8P1O95397 391 aa19.44■□□□□ 0.7
COL16A1-204ENST00000440437 F2P00734 622 aa19.44■□□□□ 0.7
COL16A1-204ENST00000440437 FOSL2P15408 326 aa19.44■□□□□ 0.7
COL16A1-204ENST00000440437 UBA1P22314 1058 aaKnown RBP19.44■□□□□ 0.7
COL16A1-204ENST00000440437 LIFRP42702 1097 aa19.44■□□□□ 0.7
COL16A1-204ENST00000440437 MYSM1Q5VVJ2 828 aa19.44■□□□□ 0.7
COL16A1-204ENST00000440437 GDF6Q6KF10 455 aaPredicted RBP19.44■□□□□ 0.7
COL16A1-204ENST00000440437 FCHSD1Q86WN1 690 aa19.44■□□□□ 0.7
COL16A1-204ENST00000440437 DHX37Q8IY37 1157 aaKnown RBP19.44■□□□□ 0.7
COL16A1-204ENST00000440437 TMTC2Q8N394 836 aa19.44■□□□□ 0.7
COL16A1-204ENST00000440437 PIBF1Q8WXW3 757 aa19.44■□□□□ 0.7
COL16A1-204ENST00000440437 CCDC69A6NI79 296 aa19.43■□□□□ 0.7
COL16A1-204ENST00000440437 IQCF3P0C7M6 154 aa19.43■□□□□ 0.7
COL16A1-204ENST00000440437 TGFB3P10600 412 aa19.43■□□□□ 0.7
COL16A1-204ENST00000440437 RFC2P35250 354 aa19.43■□□□□ 0.7
COL16A1-204ENST00000440437 CHMP4BP1P59074 171 aa19.43■□□□□ 0.7
COL16A1-204ENST00000440437 SP2Q02086 613 aa19.43■□□□□ 0.7
COL16A1-204ENST00000440437 RAB30Q15771 203 aa19.43■□□□□ 0.7
COL16A1-204ENST00000440437 PTGISQ16647 500 aa19.43■□□□□ 0.7
COL16A1-204ENST00000440437 CELF3Q5SZQ8 465 aaKnown RBP19.43■□□□□ 0.7
COL16A1-204ENST00000440437 DEFB128Q7Z7B8 93 aa19.43■□□□□ 0.7
COL16A1-204ENST00000440437 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.43■□□□□ 0.7
COL16A1-204ENST00000440437 SRBD1Q8N5C6 995 aaKnown RBP19.43■□□□□ 0.7
COL16A1-204ENST00000440437 GPKOWQ92917 476 aaPredicted RBP eCLIP19.43■□□□□ 0.7
COL16A1-204ENST00000440437 RRP36Q96EU6 259 aaKnown RBP19.43■□□□□ 0.7
COL16A1-204ENST00000440437 ZFP91Q96JP5 570 aaPredicted RBP19.43■□□□□ 0.7
COL16A1-204ENST00000440437 KATNAL1Q9BW62 490 aa19.43■□□□□ 0.7
COL16A1-204ENST00000440437 GTF2IRD1Q9UHL9 959 aa19.43■□□□□ 0.7
COL16A1-204ENST00000440437 PRUNE2Q8WUY3 3088 aa19.43■□□□□ 0.7
COL16A1-204ENST00000440437 A0A0C4DFX4 3053 aa19.43■□□□□ 0.7
COL16A1-204ENST00000440437 DLL1O00548 723 aa19.42■□□□□ 0.7
COL16A1-204ENST00000440437 GGPS1O95749 300 aa19.42■□□□□ 0.7
COL16A1-204ENST00000440437 ZNF286BP0CG31 522 aa19.42■□□□□ 0.7
COL16A1-204ENST00000440437 RXRAP19793 462 aa19.42■□□□□ 0.7
COL16A1-204ENST00000440437 PSEN2P49810 448 aa19.42■□□□□ 0.7
COL16A1-204ENST00000440437 MRPS9P82933 396 aaKnown RBP19.42■□□□□ 0.7
COL16A1-204ENST00000440437 RBL2Q08999 1139 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms