RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 CCT6AP40227 531 aaKnown RBP15.8■□□□□ 0.12
LIMD1-202ENST00000440097 CLK2P49760 499 aaKnown RBP15.8■□□□□ 0.12
LIMD1-202ENST00000440097 AMPD3Q01432 767 aa15.8■□□□□ 0.12
LIMD1-202ENST00000440097 C10orf67Q8IYJ2 551 aa15.8■□□□□ 0.12
LIMD1-202ENST00000440097 FUT8Q9BYC5 575 aa15.8■□□□□ 0.12
LIMD1-202ENST00000440097 ANO3Q9BYT9 981 aa15.8■□□□□ 0.12
LIMD1-202ENST00000440097 CUEDC2Q9H467 287 aa15.8■□□□□ 0.12
LIMD1-202ENST00000440097 GOPCQ9HD26 462 aa15.8■□□□□ 0.12
LIMD1-202ENST00000440097 EXOC1Q9NV70 894 aa15.8■□□□□ 0.12
LIMD1-202ENST00000440097 PCDHA12Q9UN75 941 aa15.8■□□□□ 0.12
LIMD1-202ENST00000440097 FILIP1LQ4L180 1135 aa15.8■□□□□ 0.12
LIMD1-202ENST00000440097 FAM83BQ5T0W9 1011 aa15.8■□□□□ 0.12
LIMD1-202ENST00000440097 SPECC1LQ69YQ0 1117 aa15.8■□□□□ 0.12
LIMD1-202ENST00000440097 PPP4R3AQ6IN85 833 aa15.8■□□□□ 0.12
LIMD1-202ENST00000440097 RSRC2Q7L4I2 434 aaKnown RBP15.8■□□□□ 0.12
LIMD1-202ENST00000440097 FCHSD1Q86WN1 690 aa15.8■□□□□ 0.12
LIMD1-202ENST00000440097 TMEM139Q8IV31 216 aa15.8■□□□□ 0.12
LIMD1-202ENST00000440097 UPF1Q92900 1129 aaKnown RBP eCLIP15.8■□□□□ 0.12
LIMD1-202ENST00000440097 RSPH14Q9UHP6 348 aa15.8■□□□□ 0.12
LIMD1-202ENST00000440097 MRFAP1Q9Y605 127 aa15.8■□□□□ 0.12
LIMD1-202ENST00000440097 MYO1CO00159 1063 aa15.79■□□□□ 0.12
LIMD1-202ENST00000440097 PES1O00541 588 aaKnown RBP15.79■□□□□ 0.12
LIMD1-202ENST00000440097 TNNT3P45378 269 aaPredicted RBP15.79■□□□□ 0.12
LIMD1-202ENST00000440097 LMAN1P49257 510 aa15.79■□□□□ 0.12
LIMD1-202ENST00000440097 PDE4DQ08499 809 aa15.79■□□□□ 0.12
LIMD1-202ENST00000440097 ANKRD20A12PQ8NF67 263 aa15.79■□□□□ 0.12
LIMD1-202ENST00000440097 KIFC2Q96AC6 838 aa15.79■□□□□ 0.12
LIMD1-202ENST00000440097 MMTAG2Q9BU76 263 aaKnown RBP15.79■□□□□ 0.12
LIMD1-202ENST00000440097 VPS33BQ9H267 617 aa15.79■□□□□ 0.12
LIMD1-202ENST00000440097 MYOZ2Q9NPC6 264 aa15.79■□□□□ 0.12
LIMD1-202ENST00000440097 RWDD2AQ9UIY3 292 aa15.79■□□□□ 0.12
LIMD1-202ENST00000440097 CNTNAP1P78357 1384 aa15.79■□□□□ 0.12
LIMD1-202ENST00000440097 EDIL3O43854 480 aa15.79■□□□□ 0.12
LIMD1-202ENST00000440097 MYL1P05976 194 aa15.79■□□□□ 0.12
LIMD1-202ENST00000440097 HOXA13P31271 388 aaPredicted RBP15.79■□□□□ 0.12
LIMD1-202ENST00000440097 FXR2P51116 673 aaKnown RBP eCLIP15.79■□□□□ 0.124e-6■■□□□ 13.5
LIMD1-202ENST00000440097 SV2BQ7L1I2 683 aa15.79■□□□□ 0.12
LIMD1-202ENST00000440097 CCDC84Q86UT8 332 aaPredicted RBP15.79■□□□□ 0.12
LIMD1-202ENST00000440097 TRIM9Q9C026 710 aa15.79■□□□□ 0.12
LIMD1-202ENST00000440097 ADAM21Q9UKJ8 722 aa15.79■□□□□ 0.12
LIMD1-202ENST00000440097 PRR12Q9ULL5 1215 aa15.79■□□□□ 0.12
LIMD1-202ENST00000440097 GJA3Q9Y6H8 435 aa15.79■□□□□ 0.12
LIMD1-202ENST00000440097 TRIM49BA6NDI0 452 aa15.78■□□□□ 0.12
LIMD1-202ENST00000440097 H3BQF6 201 aa15.78■□□□□ 0.12
LIMD1-202ENST00000440097 ARHGAP6O43182 974 aa15.78■□□□□ 0.12
LIMD1-202ENST00000440097 GCFC2P16383 781 aaKnown RBP15.78■□□□□ 0.12
LIMD1-202ENST00000440097 CCDC174Q6PII3 467 aa15.78■□□□□ 0.12
LIMD1-202ENST00000440097 CTAGE1Q96RT6 745 aa15.78■□□□□ 0.12
LIMD1-202ENST00000440097 MTFR1LQ9H019 292 aa15.78■□□□□ 0.12
LIMD1-202ENST00000440097 MAGEF1Q9HAY2 307 aa15.78■□□□□ 0.12
LIMD1-202ENST00000440097 CWC15Q9P013 229 aaKnown RBP15.78■□□□□ 0.12
LIMD1-202ENST00000440097 PSMA7O14818 248 aa15.78■□□□□ 0.12
LIMD1-202ENST00000440097 SSBP05455 408 aaKnown RBP eCLIP15.78■□□□□ 0.12
LIMD1-202ENST00000440097 DYMQ7RTS9 669 aa15.78■□□□□ 0.12
LIMD1-202ENST00000440097 GOLGA5Q8TBA6 731 aa15.78■□□□□ 0.12
LIMD1-202ENST00000440097 TEX33O43247 280 aa15.77■□□□□ 0.12
LIMD1-202ENST00000440097 IDEP14735 1019 aa15.77■□□□□ 0.12
LIMD1-202ENST00000440097 ADKP55263 362 aaKnown RBP15.77■□□□□ 0.12
LIMD1-202ENST00000440097 MCM6Q14566 821 aa15.77■□□□□ 0.12
LIMD1-202ENST00000440097 TNIP1Q15025 636 aa15.77■□□□□ 0.12
LIMD1-202ENST00000440097 PRR16Q569H4 304 aa15.77■□□□□ 0.12
LIMD1-202ENST00000440097 CPLX3Q8WVH0 158 aa15.77■□□□□ 0.12
LIMD1-202ENST00000440097 RABGGTAQ92696 567 aa15.77■□□□□ 0.12
LIMD1-202ENST00000440097 EXOC4Q96A65 974 aa15.77■□□□□ 0.12
LIMD1-202ENST00000440097 EEF2KMTQ96G04 330 aa15.77■□□□□ 0.12
LIMD1-202ENST00000440097 TRIM47Q96LD4 638 aa15.77■□□□□ 0.12
LIMD1-202ENST00000440097 VPS16Q9H269 839 aa15.77■□□□□ 0.12
LIMD1-202ENST00000440097 MEIS2O14770 477 aa15.77■□□□□ 0.11
LIMD1-202ENST00000440097 N4BP3O15049 544 aa15.77■□□□□ 0.11
LIMD1-202ENST00000440097 GRB10Q13322 594 aa15.77■□□□□ 0.11
LIMD1-202ENST00000440097 KCNB1Q14721 858 aa15.77■□□□□ 0.11
LIMD1-202ENST00000440097 LONRF2Q1L5Z9 754 aa15.77■□□□□ 0.11
LIMD1-202ENST00000440097 TOGARAM2Q6ZUX3 1019 aa15.77■□□□□ 0.11
LIMD1-202ENST00000440097 LARP4BQ92615 738 aaKnown RBP15.77■□□□□ 0.11
LIMD1-202ENST00000440097 TMX2Q9Y320 296 aa15.77■□□□□ 0.11
LIMD1-202ENST00000440097 COL2A1P02458 1487 aaPredicted RBP15.77■□□□□ 0.11
LIMD1-202ENST00000440097 ARHGAP4P98171 946 aa15.76■□□□□ 0.11
LIMD1-202ENST00000440097 PDIA5Q14554 519 aa15.76■□□□□ 0.11
LIMD1-202ENST00000440097 RASA3Q14644 834 aa15.76■□□□□ 0.11
LIMD1-202ENST00000440097 KIAA1755Q5JYT7 1200 aa15.76■□□□□ 0.11
LIMD1-202ENST00000440097 APTXQ7Z2E3 356 aaKnown RBP15.76■□□□□ 0.11
LIMD1-202ENST00000440097 GOLGA1Q92805 767 aa15.76■□□□□ 0.11
LIMD1-202ENST00000440097 HAS1Q92839 578 aa15.76■□□□□ 0.11
LIMD1-202ENST00000440097 NAP1L4Q99733 375 aaKnown RBP15.76■□□□□ 0.11
LIMD1-202ENST00000440097 BAG1Q99933 345 aaPredicted RBP15.76■□□□□ 0.11
LIMD1-202ENST00000440097 NUDT12Q9BQG2 462 aa15.76■□□□□ 0.11
LIMD1-202ENST00000440097 A0A1B0GTH6 734 aa15.76■□□□□ 0.11
LIMD1-202ENST00000440097 KLRC4O43908 158 aa15.76■□□□□ 0.11
LIMD1-202ENST00000440097 RHOBTB3O94955 611 aa15.76■□□□□ 0.11
LIMD1-202ENST00000440097 CFBP00751 764 aa15.76■□□□□ 0.11
LIMD1-202ENST00000440097 ZNF76P36508 570 aa15.76■□□□□ 0.11
LIMD1-202ENST00000440097 AP3B2Q13367 1082 aa15.76■□□□□ 0.11
LIMD1-202ENST00000440097 NR1I3Q14994 352 aa15.76■□□□□ 0.11
LIMD1-202ENST00000440097 CDKAL1Q5VV42 579 aa15.76■□□□□ 0.11
LIMD1-202ENST00000440097 ILDR2Q71H61 639 aa15.76■□□□□ 0.11
LIMD1-202ENST00000440097 FAM83AQ86UY5 434 aa15.76■□□□□ 0.11
LIMD1-202ENST00000440097 PPFIBP1Q86W92 1011 aa15.76■□□□□ 0.11
LIMD1-202ENST00000440097 HPS3Q969F9 1004 aa15.76■□□□□ 0.11
LIMD1-202ENST00000440097 ZFP91Q96JP5 570 aaPredicted RBP15.76■□□□□ 0.11
LIMD1-202ENST00000440097 TAB2Q9NYJ8 693 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms