RNA–Protein interactions for RNA: ENST00000440053.1

VIL1-204, Transcript of villin 1, humanhuman

TSL 1 (best) BASIC

Gene VIL1, Length 1,454 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-204ENST00000440053 BRPF3Q9ULD4 1205 aa23.97■■□□□ 1.43
VIL1-204ENST00000440053 CSF2RAP15509 400 aa23.96■■□□□ 1.43
VIL1-204ENST00000440053 SMARCA1P28370 1054 aa23.96■■□□□ 1.43
VIL1-204ENST00000440053 CHMP4BP1P59074 171 aa23.96■■□□□ 1.43
VIL1-204ENST00000440053 TRAF1Q13077 416 aa23.96■■□□□ 1.43
VIL1-204ENST00000440053 USP17L6PQ6QN14 398 aa23.96■■□□□ 1.43
VIL1-204ENST00000440053 SGMS1Q86VZ5 419 aa23.96■■□□□ 1.43
VIL1-204ENST00000440053 MICU3Q86XE3 530 aa23.96■■□□□ 1.43
VIL1-204ENST00000440053 GPKOWQ92917 476 aaPredicted RBP eCLIP23.96■■□□□ 1.43
VIL1-204ENST00000440053 LZTS2Q9BRK4 669 aa23.96■■□□□ 1.43
VIL1-204ENST00000440053 TRMT13Q9NUP7 481 aaKnown RBP23.96■■□□□ 1.43
VIL1-204ENST00000440053 GH1P01241 217 aa23.95■■□□□ 1.42
VIL1-204ENST00000440053 CALM1P0DP23 149 aa23.95■■□□□ 1.42
VIL1-204ENST00000440053 CALM2P0DP24 149 aa23.95■■□□□ 1.42
VIL1-204ENST00000440053 CALM3P0DP25 149 aa23.95■■□□□ 1.42
VIL1-204ENST00000440053 GNAQP50148 359 aa23.95■■□□□ 1.42
VIL1-204ENST00000440053 DEFB123Q8N688 67 aa23.95■■□□□ 1.42
VIL1-204ENST00000440053 SAMD3Q8N6K7 520 aa23.95■■□□□ 1.42
VIL1-204ENST00000440053 ALDH8A1Q9H2A2 487 aaPredicted RBP23.95■■□□□ 1.42
VIL1-204ENST00000440053 MRVI1Q9Y6F6 885 aa23.95■■□□□ 1.42
VIL1-204ENST00000440053 ACRP10323 421 aa23.94■■□□□ 1.42
VIL1-204ENST00000440053 SP2Q02086 613 aa23.94■■□□□ 1.42
VIL1-204ENST00000440053 BRDTQ58F21 947 aaPredicted RBP23.94■■□□□ 1.42
VIL1-204ENST00000440053 BCAS3Q9H6U6 928 aa23.94■■□□□ 1.42
VIL1-204ENST00000440053 SEC63Q9UGP8 760 aaKnown RBP23.94■■□□□ 1.42
VIL1-204ENST00000440053 MMP3P08254 477 aa23.94■■□□□ 1.42
VIL1-204ENST00000440053 CCL23P55773 120 aa23.94■■□□□ 1.42
VIL1-204ENST00000440053 FAM47CQ5HY64 1035 aa23.94■■□□□ 1.42
VIL1-204ENST00000440053 APOA5Q6Q788 366 aa23.94■■□□□ 1.42
VIL1-204ENST00000440053 TMTC3Q6ZXV5 915 aa23.94■■□□□ 1.42
VIL1-204ENST00000440053 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.94■■□□□ 1.427e-12■□□□□ 8.3
VIL1-204ENST00000440053 HIPK3Q9H422 1215 aa23.94■■□□□ 1.42
VIL1-204ENST00000440053 MEIS2O14770 477 aa23.93■■□□□ 1.42
VIL1-204ENST00000440053 CYP2C9P11712 490 aa23.93■■□□□ 1.42
VIL1-204ENST00000440053 SYNE3Q6ZMZ3 975 aa23.93■■□□□ 1.42
VIL1-204ENST00000440053 KCNB2Q92953 911 aa23.93■■□□□ 1.42
VIL1-204ENST00000440053 RTEL1Q9NZ71 1219 aa23.93■■□□□ 1.42
VIL1-204ENST00000440053 SNX14Q9Y5W7 946 aa23.93■■□□□ 1.42
VIL1-204ENST00000440053 CCND2P30279 289 aa23.92■■□□□ 1.42
VIL1-204ENST00000440053 MRPS9P82933 396 aaKnown RBP23.92■■□□□ 1.42
VIL1-204ENST00000440053 GPR153Q6NV75 609 aa23.92■■□□□ 1.42
VIL1-204ENST00000440053 DHX37Q8IY37 1157 aaKnown RBP23.92■■□□□ 1.42
VIL1-204ENST00000440053 TMEM199Q8N511 208 aa23.92■■□□□ 1.42
VIL1-204ENST00000440053 KAT2BQ92831 832 aa23.92■■□□□ 1.42
VIL1-204ENST00000440053 RNPC3Q96LT9 517 aaKnown RBP23.92■■□□□ 1.42
VIL1-204ENST00000440053 FAM161BQ96MY7 647 aa23.92■■□□□ 1.42
VIL1-204ENST00000440053 NOC4LQ9BVI4 516 aaKnown RBP23.92■■□□□ 1.42
VIL1-204ENST00000440053 KPNA6O60684 536 aa23.91■■□□□ 1.42
VIL1-204ENST00000440053 HSPA4P34932 840 aa23.91■■□□□ 1.42
VIL1-204ENST00000440053 KRT32Q14532 448 aa23.91■■□□□ 1.42
VIL1-204ENST00000440053 TMEM240Q5SV17 173 aa23.91■■□□□ 1.42
VIL1-204ENST00000440053 SMARCC2Q8TAQ2 1214 aa23.91■■□□□ 1.42
VIL1-204ENST00000440053 SEZ6LQ9BYH1 1024 aa23.91■■□□□ 1.42
VIL1-204ENST00000440053 PPIGQ13427 754 aaKnown RBP eCLIP23.9■■□□□ 1.422e-10■■□□□ 12.5
VIL1-204ENST00000440053 SCLYQ96I15 445 aa23.9■■□□□ 1.42
VIL1-204ENST00000440053 JAKMIP1Q96N16 626 aaKnown RBP23.9■■□□□ 1.42
VIL1-204ENST00000440053 WNT8AQ9H1J5 351 aa23.9■■□□□ 1.42
VIL1-204ENST00000440053 FAM217BQ9NTX9 383 aaPredicted RBP23.9■■□□□ 1.42
VIL1-204ENST00000440053 MTMR10Q9NXD2 777 aa23.9■■□□□ 1.42
VIL1-204ENST00000440053 KLF18A0A0U1RQI7 1052 aa23.89■■□□□ 1.42
VIL1-204ENST00000440053 RBAK-RBAKDNI3L0D1 243 aa23.89■■□□□ 1.42
VIL1-204ENST00000440053 ZBTB43O43298 467 aa23.89■■□□□ 1.42
VIL1-204ENST00000440053 LAMC2Q13753 1193 aa23.89■■□□□ 1.42
VIL1-204ENST00000440053 MYSM1Q5VVJ2 828 aa23.89■■□□□ 1.42
VIL1-204ENST00000440053 ZNF365Q70YC5 407 aa23.89■■□□□ 1.42
VIL1-204ENST00000440053 PSTPIP2Q9H939 334 aa23.89■■□□□ 1.42
VIL1-204ENST00000440053 NAP1L2Q9ULW6 460 aaPredicted RBP23.89■■□□□ 1.42
VIL1-204ENST00000440053 KIAA1217Q5T5P2 1943 aa23.89■■□□□ 1.42
VIL1-204ENST00000440053 GGPS1O95749 300 aa23.88■■□□□ 1.41
VIL1-204ENST00000440053 CASTP20810 708 aaKnown RBP23.88■■□□□ 1.41
VIL1-204ENST00000440053 CDC27P30260 824 aa23.88■■□□□ 1.41
VIL1-204ENST00000440053 APOBRQ0VD83 1088 aa23.88■■□□□ 1.41
VIL1-204ENST00000440053 FUT2Q10981 343 aa23.88■■□□□ 1.41
VIL1-204ENST00000440053 UBE2SQ16763 222 aa23.88■■□□□ 1.41
VIL1-204ENST00000440053 HSDL1Q3SXM5 330 aa23.88■■□□□ 1.41
VIL1-204ENST00000440053 CELF3Q5SZQ8 465 aaKnown RBP23.88■■□□□ 1.41
VIL1-204ENST00000440053 FAM109BQ6ICB4 259 aaPredicted RBP23.88■■□□□ 1.41
VIL1-204ENST00000440053 Q6ZUG5 572 aa23.88■■□□□ 1.41
VIL1-204ENST00000440053 CUL5Q93034 780 aa23.88■■□□□ 1.41
VIL1-204ENST00000440053 EMID1Q96A84 441 aaPredicted RBP23.88■■□□□ 1.41
VIL1-204ENST00000440053 PPP4R2Q9NY27 417 aa23.88■■□□□ 1.41
VIL1-204ENST00000440053 V9GY48 417 aaPredicted RBP23.88■■□□□ 1.41
VIL1-204ENST00000440053 UBA1P22314 1058 aaKnown RBP23.87■■□□□ 1.41
VIL1-204ENST00000440053 DGKDQ16760 1214 aa23.87■■□□□ 1.41
VIL1-204ENST00000440053 RTN1Q16799 776 aa23.87■■□□□ 1.41
VIL1-204ENST00000440053 NFRKBQ6P4R8 1299 aa23.87■■□□□ 1.41
VIL1-204ENST00000440053 HEATR3Q7Z4Q2 680 aa23.87■■□□□ 1.41
VIL1-204ENST00000440053 IL23AQ9NPF7 189 aa23.87■■□□□ 1.41
VIL1-204ENST00000440053 FRMPD4Q14CM0 1322 aa23.87■■□□□ 1.41
VIL1-204ENST00000440053 PIK3CDO00329 1044 aa23.87■■□□□ 1.41
VIL1-204ENST00000440053 HMGB1P09429 215 aaKnown RBP23.87■■□□□ 1.41
VIL1-204ENST00000440053 SUPT20HL2P0C7V6 817 aa23.87■■□□□ 1.41
VIL1-204ENST00000440053 ZNF286BP0CG31 522 aa23.87■■□□□ 1.41
VIL1-204ENST00000440053 SEMA3FQ13275 785 aa23.87■■□□□ 1.41
VIL1-204ENST00000440053 KCNV1Q6PIU1 500 aa23.87■■□□□ 1.41
VIL1-204ENST00000440053 PPTC7Q8NI37 304 aa23.87■■□□□ 1.41
VIL1-204ENST00000440053 VWCEQ96DN2 955 aa23.87■■□□□ 1.41
VIL1-204ENST00000440053 SPATA33Q96N06 139 aa23.87■■□□□ 1.41
VIL1-204ENST00000440053 ALG1Q9BT22 464 aa23.87■■□□□ 1.41
VIL1-204ENST00000440053 TELO2Q9Y4R8 837 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms