RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 CATIPQ7Z7H3 387 aa5.39□□□□□ -1.55
EDEM3-203ENST00000439962 FERMT3Q86UX7 667 aa5.39□□□□□ -1.55
EDEM3-203ENST00000439962 CCDC150Q8NCX0 1101 aa5.39□□□□□ -1.55
EDEM3-203ENST00000439962 CCDC34Q96HJ3 373 aa5.39□□□□□ -1.55
EDEM3-203ENST00000439962 C12orf42Q96LP6 360 aa5.39□□□□□ -1.55
EDEM3-203ENST00000439962 USP28Q96RU2 1077 aa5.39□□□□□ -1.55
EDEM3-203ENST00000439962 PYM1Q9BRP8 204 aaKnown RBP5.39□□□□□ -1.55
EDEM3-203ENST00000439962 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.39□□□□□ -1.55
EDEM3-203ENST00000439962 SLC38A10Q9HBR0 1119 aa5.39□□□□□ -1.55
EDEM3-203ENST00000439962 A1CFQ9NQ94 594 aaKnown RBP5.39□□□□□ -1.55
EDEM3-203ENST00000439962 ORC3Q9UBD5 711 aaPredicted RBP5.39□□□□□ -1.55
EDEM3-203ENST00000439962 FEM1BQ9UK73 627 aa5.39□□□□□ -1.55
EDEM3-203ENST00000439962 SLC12A7Q9Y666 1083 aa5.39□□□□□ -1.55
EDEM3-203ENST00000439962 TRIOO75962 3097 aa5.39□□□□□ -1.55
EDEM3-203ENST00000439962 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.39□□□□□ -1.55
EDEM3-203ENST00000439962 FGRP09769 529 aa5.39□□□□□ -1.55
EDEM3-203ENST00000439962 CALM1P0DP23 149 aa5.39□□□□□ -1.55
EDEM3-203ENST00000439962 CALM2P0DP24 149 aa5.39□□□□□ -1.55
EDEM3-203ENST00000439962 CALM3P0DP25 149 aa5.39□□□□□ -1.55
EDEM3-203ENST00000439962 NLRP12P59046 1061 aa5.39□□□□□ -1.55
EDEM3-203ENST00000439962 ZNF543Q08ER8 600 aa5.39□□□□□ -1.55
EDEM3-203ENST00000439962 TRIM29Q14134 588 aa5.39□□□□□ -1.55
EDEM3-203ENST00000439962 QRICH1Q2TAL8 776 aa5.39□□□□□ -1.55
EDEM3-203ENST00000439962 MFSD14CQ5VZR4 134 aa5.39□□□□□ -1.55
EDEM3-203ENST00000439962 KANK3Q6NY19 840 aa5.39□□□□□ -1.55
EDEM3-203ENST00000439962 HEATR3Q7Z4Q2 680 aa5.39□□□□□ -1.55
EDEM3-203ENST00000439962 TRIML1Q8N9V2 468 aa5.39□□□□□ -1.55
EDEM3-203ENST00000439962 SLAIN1Q8ND83 568 aa5.39□□□□□ -1.55
EDEM3-203ENST00000439962 PHKBQ93100 1093 aa5.39□□□□□ -1.55
EDEM3-203ENST00000439962 FOXP1Q9H334 677 aaPredicted RBP5.39□□□□□ -1.55
EDEM3-203ENST00000439962 TUBE1Q9UJT0 475 aa5.39□□□□□ -1.55
EDEM3-203ENST00000439962 CEP131Q9UPN4 1083 aa5.39□□□□□ -1.55
EDEM3-203ENST00000439962 HPSEQ9Y251 543 aa5.39□□□□□ -1.55
EDEM3-203ENST00000439962 PCDHA1Q9Y5I3 950 aa5.39□□□□□ -1.55
EDEM3-203ENST00000439962 COL2A1P02458 1487 aaPredicted RBP5.39□□□□□ -1.55
EDEM3-203ENST00000439962 FOCADQ5VW36 1801 aa5.38□□□□□ -1.55
EDEM3-203ENST00000439962 UQCRHLA0A096LP55 91 aa5.38□□□□□ -1.55
EDEM3-203ENST00000439962 CBFA2T2O43439 604 aa5.38□□□□□ -1.55
EDEM3-203ENST00000439962 FARP2O94887 1054 aaPredicted RBP5.38□□□□□ -1.55
EDEM3-203ENST00000439962 UQCRHP07919 91 aa5.38□□□□□ -1.55
EDEM3-203ENST00000439962 ADCYAP1R1P41586 468 aa5.38□□□□□ -1.55
EDEM3-203ENST00000439962 METAP2P50579 478 aaKnown RBP eCLIP5.38□□□□□ -1.55
EDEM3-203ENST00000439962 RPS6P62753 249 aaKnown RBP5.38□□□□□ -1.55
EDEM3-203ENST00000439962 MDM2Q00987 491 aaPredicted RBP5.38□□□□□ -1.55
EDEM3-203ENST00000439962 STK38Q15208 465 aa5.38□□□□□ -1.55
EDEM3-203ENST00000439962 APOA5Q6Q788 366 aa5.38□□□□□ -1.55
EDEM3-203ENST00000439962 USP17L6PQ6QN14 398 aa5.38□□□□□ -1.55
EDEM3-203ENST00000439962 C7orf61Q8IZ16 206 aa5.38□□□□□ -1.55
EDEM3-203ENST00000439962 ZNF654Q8IZM8 581 aa5.38□□□□□ -1.55
EDEM3-203ENST00000439962 FSIP1Q8NA03 581 aa5.38□□□□□ -1.55
EDEM3-203ENST00000439962 TRPV1Q8NER1 839 aa5.38□□□□□ -1.55
EDEM3-203ENST00000439962 CTCFLQ8NI51 663 aaPredicted RBP5.38□□□□□ -1.55
EDEM3-203ENST00000439962 IGDCC4Q8TDY8 1250 aa5.38□□□□□ -1.55
EDEM3-203ENST00000439962 COPS5Q92905 334 aa5.38□□□□□ -1.55
EDEM3-203ENST00000439962 MAML3Q96JK9 1138 aa5.38□□□□□ -1.55
EDEM3-203ENST00000439962 APBA2Q99767 749 aa5.38□□□□□ -1.55
EDEM3-203ENST00000439962 KIAA1468Q9P260 1216 aa5.38□□□□□ -1.55
EDEM3-203ENST00000439962 MORF4L1Q9UBU8 362 aa5.38□□□□□ -1.55
EDEM3-203ENST00000439962 DACH1Q9UI36 760 aa5.38□□□□□ -1.55
EDEM3-203ENST00000439962 PCDHA7Q9UN72 937 aa5.38□□□□□ -1.55
EDEM3-203ENST00000439962 ATP11BQ9Y2G3 1177 aa5.38□□□□□ -1.55
EDEM3-203ENST00000439962 R3HCC1Q9Y3T6 440 aaKnown RBP5.38□□□□□ -1.55
EDEM3-203ENST00000439962 ROBO3Q96MS0 1386 aa5.38□□□□□ -1.55
EDEM3-203ENST00000439962 WDFY4Q6ZS81 3184 aa5.38□□□□□ -1.55
EDEM3-203ENST00000439962 ZNF536O15090 1300 aa5.38□□□□□ -1.55
EDEM3-203ENST00000439962 DYNC1LI2O43237 492 aaPredicted RBP5.38□□□□□ -1.55
EDEM3-203ENST00000439962 ZBTB43O43298 467 aa5.38□□□□□ -1.55
EDEM3-203ENST00000439962 CTIFO43310 598 aaKnown RBP5.38□□□□□ -1.55
EDEM3-203ENST00000439962 PQBP1O60828 265 aaKnown RBP5.38□□□□□ -1.55
EDEM3-203ENST00000439962 ME1P48163 572 aa5.38□□□□□ -1.55
EDEM3-203ENST00000439962 ZRSR1Q15695 479 aaKnown RBP5.38□□□□□ -1.55
EDEM3-203ENST00000439962 NTRK3Q16288 839 aa5.38□□□□□ -1.55
EDEM3-203ENST00000439962 UBE2SQ16763 222 aa5.38□□□□□ -1.55
EDEM3-203ENST00000439962 CCDC178Q5BJE1 867 aa5.38□□□□□ -1.55
EDEM3-203ENST00000439962 RILPL1Q5EBL4 403 aa5.38□□□□□ -1.55
EDEM3-203ENST00000439962 RNF207Q6ZRF8 634 aa5.38□□□□□ -1.55
EDEM3-203ENST00000439962 PDCL2Q8N4E4 241 aa5.38□□□□□ -1.55
EDEM3-203ENST00000439962 MAP3K14Q99558 947 aa5.38□□□□□ -1.55
EDEM3-203ENST00000439962 CFHR5Q9BXR6 569 aa5.38□□□□□ -1.55
EDEM3-203ENST00000439962 ACAD9Q9H845 621 aa5.38□□□□□ -1.55
EDEM3-203ENST00000439962 JMJD4Q9H9V9 463 aa5.38□□□□□ -1.55
EDEM3-203ENST00000439962 RBM28Q9NW13 759 aaKnown RBP5.38□□□□□ -1.55
EDEM3-203ENST00000439962 FAM13BQ9NYF5 915 aa5.38□□□□□ -1.55
EDEM3-203ENST00000439962 TFIP11Q9UBB9 837 aaKnown RBP5.38□□□□□ -1.55
EDEM3-203ENST00000439962 SLC45A1Q9Y2W3 748 aa5.38□□□□□ -1.55
EDEM3-203ENST00000439962 CUL9Q8IWT3 2517 aa5.38□□□□□ -1.55
EDEM3-203ENST00000439962 MYADML2A6NDP7 307 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 BECN2A8MW95 431 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 ADCY6O43306 1168 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 CYTH3O43739 400 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 EVI5O60447 810 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 DEXIO95424 95 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 SGPL1O95470 568 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 XBP1P17861 261 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 SSRP1Q08945 709 aaKnown RBP5.37□□□□□ -1.55
EDEM3-203ENST00000439962 GRB14Q14449 540 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 SAFBQ15424 915 aaKnown RBP eCLIP5.37□□□□□ -1.55
EDEM3-203ENST00000439962 SF3A1Q15459 793 aaKnown RBP5.37□□□□□ -1.55
EDEM3-203ENST00000439962 CCDC144BQ3MJ40 725 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 FOXD4L6Q3SYB3 417 aaPredicted RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms