RNA–Protein interactions for RNA: ENST00000439936.6

COPS3-203, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5 BASIC

Gene COPS3, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-203ENST00000439936 TEX13BQ9BXU2 312 aa8.69□□□□□ -1.02
COPS3-203ENST00000439936 RANBP17Q9H2T7 1088 aaKnown RBP8.69□□□□□ -1.02
COPS3-203ENST00000439936 JMJD4Q9H9V9 463 aa8.69□□□□□ -1.02
COPS3-203ENST00000439936 CWC22Q9HCG8 908 aaKnown RBP8.69□□□□□ -1.02
COPS3-203ENST00000439936 BRPF3Q9ULD4 1205 aa8.69□□□□□ -1.02
COPS3-203ENST00000439936 CYP46A1Q9Y6A2 500 aa8.69□□□□□ -1.02
COPS3-203ENST00000439936 IVNS1ABPQ9Y6Y0 642 aa8.69□□□□□ -1.02
COPS3-203ENST00000439936 ADCY3O60266 1144 aa8.68□□□□□ -1.02
COPS3-203ENST00000439936 COBLO75128 1261 aa8.68□□□□□ -1.02
COPS3-203ENST00000439936 DDAH1O94760 285 aa8.68□□□□□ -1.02
COPS3-203ENST00000439936 CALM1P0DP23 149 aa8.68□□□□□ -1.02
COPS3-203ENST00000439936 CALM2P0DP24 149 aa8.68□□□□□ -1.02
COPS3-203ENST00000439936 CALM3P0DP25 149 aa8.68□□□□□ -1.02
COPS3-203ENST00000439936 FCER1AP12319 257 aa8.68□□□□□ -1.02
COPS3-203ENST00000439936 ALAS1P13196 640 aa8.68□□□□□ -1.02
COPS3-203ENST00000439936 RXRAP19793 462 aa8.68□□□□□ -1.02
COPS3-203ENST00000439936 GRK4P32298 578 aa8.68□□□□□ -1.02
COPS3-203ENST00000439936 ANAPC15P60006 121 aa8.68□□□□□ -1.02
COPS3-203ENST00000439936 SH3BP2P78314 561 aa8.68□□□□□ -1.02
COPS3-203ENST00000439936 APOBRQ0VD83 1088 aa8.68□□□□□ -1.02
COPS3-203ENST00000439936 IRF5Q13568 498 aa8.68□□□□□ -1.02
COPS3-203ENST00000439936 APOA5Q6Q788 366 aa8.68□□□□□ -1.02
COPS3-203ENST00000439936 SYNE3Q6ZMZ3 975 aa8.68□□□□□ -1.02
COPS3-203ENST00000439936 RAB11FIP4Q86YS3 637 aa8.68□□□□□ -1.02
COPS3-203ENST00000439936 FBXL16Q8N461 479 aa8.68□□□□□ -1.02
COPS3-203ENST00000439936 FANCBQ8NB91 859 aa8.68□□□□□ -1.02
COPS3-203ENST00000439936 NPLOC4Q8TAT6 608 aa8.68□□□□□ -1.02
COPS3-203ENST00000439936 BRF1Q92994 677 aa8.68□□□□□ -1.02
COPS3-203ENST00000439936 ABHD8Q96I13 439 aa8.68□□□□□ -1.02
COPS3-203ENST00000439936 TRERF1Q96PN7 1200 aa8.68□□□□□ -1.02
COPS3-203ENST00000439936 AGXT2Q9BYV1 514 aa8.68□□□□□ -1.02
COPS3-203ENST00000439936 UPF3BQ9BZI7 483 aaKnown RBP8.68□□□□□ -1.02
COPS3-203ENST00000439936 RIOX1Q9H6W3 641 aa8.68□□□□□ -1.02
COPS3-203ENST00000439936 EVA1BQ9NVM1 165 aa8.68□□□□□ -1.02
COPS3-203ENST00000439936 SLC12A7Q9Y666 1083 aa8.68□□□□□ -1.02
COPS3-203ENST00000439936 KLF18A0A0U1RQI7 1052 aa8.67□□□□□ -1.02
COPS3-203ENST00000439936 CYTH3O43739 400 aa8.67□□□□□ -1.02
COPS3-203ENST00000439936 DHX16O60231 1041 aaKnown RBP8.67□□□□□ -1.02
COPS3-203ENST00000439936 F12P00748 615 aaPredicted RBP8.67□□□□□ -1.02
COPS3-203ENST00000439936 ICAM1P05362 532 aa8.67□□□□□ -1.02
COPS3-203ENST00000439936 XRCC5P13010 732 aaKnown RBP8.67□□□□□ -1.02
COPS3-203ENST00000439936 ELNP15502 786 aa8.67□□□□□ -1.02
COPS3-203ENST00000439936 SMARCA1P28370 1054 aa8.67□□□□□ -1.02
COPS3-203ENST00000439936 ADORA2AP29274 412 aa8.67□□□□□ -1.02
COPS3-203ENST00000439936 COPB2P35606 906 aa8.67□□□□□ -1.02
COPS3-203ENST00000439936 FGD1P98174 961 aa8.67□□□□□ -1.02
COPS3-203ENST00000439936 TOB2Q14106 344 aaPredicted RBP8.67□□□□□ -1.02
COPS3-203ENST00000439936 GRB14Q14449 540 aa8.67□□□□□ -1.02
COPS3-203ENST00000439936 TKFCQ3LXA3 575 aa8.67□□□□□ -1.02
COPS3-203ENST00000439936 MUM1L1Q5H9M0 696 aa8.67□□□□□ -1.02
COPS3-203ENST00000439936 DPP9Q86TI2 863 aa8.67□□□□□ -1.02
COPS3-203ENST00000439936 CCDC144CPQ8IYA2 1237 aa8.67□□□□□ -1.02
COPS3-203ENST00000439936 ABRAQ8N0Z2 381 aa8.67□□□□□ -1.02
COPS3-203ENST00000439936 SRBD1Q8N5C6 995 aaKnown RBP8.67□□□□□ -1.02
COPS3-203ENST00000439936 CHST13Q8NET6 341 aa8.67□□□□□ -1.02
COPS3-203ENST00000439936 CTCFLQ8NI51 663 aaPredicted RBP8.67□□□□□ -1.02
COPS3-203ENST00000439936 EPS8L1Q8TE68 723 aa8.67□□□□□ -1.02
COPS3-203ENST00000439936 SH3TC2Q8TF17 1288 aa8.67□□□□□ -1.02
COPS3-203ENST00000439936 MTMR8Q96EF0 704 aa8.67□□□□□ -1.02
COPS3-203ENST00000439936 IL17RAQ96F46 866 aa8.67□□□□□ -1.02
COPS3-203ENST00000439936 DDX11Q96FC9 970 aa8.67□□□□□ -1.02
COPS3-203ENST00000439936 MMP19Q99542 508 aa8.67□□□□□ -1.02
COPS3-203ENST00000439936 CCPG1Q9ULG6 757 aa8.67□□□□□ -1.02
COPS3-203ENST00000439936 PLXNA1Q9UIW2 1896 aa8.66□□□□□ -1.02
COPS3-203ENST00000439936 ZBTB43O43298 467 aa8.66□□□□□ -1.02
COPS3-203ENST00000439936 PGK2P07205 417 aa8.66□□□□□ -1.02
COPS3-203ENST00000439936 HOXC6P09630 235 aa8.66□□□□□ -1.02
COPS3-203ENST00000439936 TAL1P17542 331 aaPredicted RBP8.66□□□□□ -1.02
COPS3-203ENST00000439936 KIF5BP33176 963 aa8.66□□□□□ -1.02
COPS3-203ENST00000439936 RGS2P41220 211 aa8.66□□□□□ -1.02
COPS3-203ENST00000439936 GNAQP50148 359 aa8.66□□□□□ -1.02
COPS3-203ENST00000439936 EVCP57679 992 aa8.66□□□□□ -1.02
COPS3-203ENST00000439936 KCTD2Q14681 263 aa8.66□□□□□ -1.02
COPS3-203ENST00000439936 CDC37Q16543 378 aaPredicted RBP8.66□□□□□ -1.02
COPS3-203ENST00000439936 CCL14Q16627 93 aa8.66□□□□□ -1.02
COPS3-203ENST00000439936 QRICH1Q2TAL8 776 aa8.66□□□□□ -1.02
COPS3-203ENST00000439936 ZNF792Q3KQV3 632 aa8.66□□□□□ -1.02
COPS3-203ENST00000439936 SLC9C1Q4G0N8 1177 aa8.66□□□□□ -1.02
COPS3-203ENST00000439936 FBXO11Q86XK2 927 aa8.66□□□□□ -1.02
COPS3-203ENST00000439936 CMTR1Q8N1G2 835 aaKnown RBP8.66□□□□□ -1.02
COPS3-203ENST00000439936 CCDC82Q8N4S0 544 aa8.66□□□□□ -1.02
COPS3-203ENST00000439936 SOCS4Q8WXH5 440 aa8.66□□□□□ -1.02
COPS3-203ENST00000439936 CLEC4DQ8WXI8 215 aa8.66□□□□□ -1.02
COPS3-203ENST00000439936 TBC1D5Q92609 795 aa8.66□□□□□ -1.02
COPS3-203ENST00000439936 PIGSQ96S52 555 aa8.66□□□□□ -1.02
COPS3-203ENST00000439936 UNC93B1Q9H1C4 597 aa8.66□□□□□ -1.02
COPS3-203ENST00000439936 ALDH8A1Q9H2A2 487 aaPredicted RBP8.66□□□□□ -1.02
COPS3-203ENST00000439936 HOMER2Q9NSB8 354 aa8.66□□□□□ -1.02
COPS3-203ENST00000439936 RNF146Q9NTX7 359 aa8.66□□□□□ -1.02
COPS3-203ENST00000439936 PDRG1Q9NUG6 133 aa8.66□□□□□ -1.02
COPS3-203ENST00000439936 FLRT1Q9NZU1 646 aa8.66□□□□□ -1.02
COPS3-203ENST00000439936 NXF1Q9UBU9 619 aaKnown RBP8.66□□□□□ -1.02
COPS3-203ENST00000439936 BIN2Q9UBW5 565 aaPredicted RBP8.66□□□□□ -1.02
COPS3-203ENST00000439936 FBXO40Q9UH90 709 aa8.66□□□□□ -1.02
COPS3-203ENST00000439936 DNAJC25-GNG10A0A024R161 153 aa8.65□□□□□ -1.02
COPS3-203ENST00000439936 PNMA6FA0A0J9YX94 578 aa8.65□□□□□ -1.02
COPS3-203ENST00000439936 CCDC85CA6NKD9 419 aa8.65□□□□□ -1.02
COPS3-203ENST00000439936 ZBTB5O15062 677 aa8.65□□□□□ -1.02
COPS3-203ENST00000439936 PPP1R11O60927 126 aaPredicted RBP8.65□□□□□ -1.02
COPS3-203ENST00000439936 PLEKHA8P1O95397 391 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms