RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 MTMR8Q96EF0 704 aa13.5□□□□□ -0.25
HDAC8-214ENST00000439122 ERGIC2Q96RQ1 377 aa13.5□□□□□ -0.25
HDAC8-214ENST00000439122 TRIM34Q9BYJ4 488 aa13.5□□□□□ -0.25
HDAC8-214ENST00000439122 PRDM4Q9UKN5 801 aa13.5□□□□□ -0.25
HDAC8-214ENST00000439122 PCDHA1Q9Y5I3 950 aa13.5□□□□□ -0.25
HDAC8-214ENST00000439122 SSBP05455 408 aaKnown RBP eCLIP13.5□□□□□ -0.25
HDAC8-214ENST00000439122 GCFC2P16383 781 aaKnown RBP13.5□□□□□ -0.25
HDAC8-214ENST00000439122 ERCC3P19447 782 aa13.5□□□□□ -0.25
HDAC8-214ENST00000439122 PLA2G4AP47712 749 aa13.5□□□□□ -0.25
HDAC8-214ENST00000439122 QRICH1Q2TAL8 776 aa13.5□□□□□ -0.25
HDAC8-214ENST00000439122 VWA3BQ502W6 1294 aa13.5□□□□□ -0.25
HDAC8-214ENST00000439122 MYO6Q9UM54 1294 aa13.5□□□□□ -0.25
HDAC8-214ENST00000439122 C10orf71Q711Q0 1435 aa13.49□□□□□ -0.25
HDAC8-214ENST00000439122 DDTLA6NHG4 134 aaPredicted RBP13.49□□□□□ -0.25
HDAC8-214ENST00000439122 FGFR1OPO95684 399 aaKnown RBP13.49□□□□□ -0.25
HDAC8-214ENST00000439122 TBC1D8O95759 1140 aa13.49□□□□□ -0.25
HDAC8-214ENST00000439122 LRRC63Q05C16 580 aa13.49□□□□□ -0.25
HDAC8-214ENST00000439122 TERF2Q15554 542 aa13.49□□□□□ -0.25
HDAC8-214ENST00000439122 WHAMMP3Q1A5X7 153 aa13.49□□□□□ -0.25
HDAC8-214ENST00000439122 MSL1Q68DK7 614 aa13.49□□□□□ -0.25
HDAC8-214ENST00000439122 ZNF771Q7L3S4 317 aaPredicted RBP13.49□□□□□ -0.25
HDAC8-214ENST00000439122 GLIS3Q8NEA6 775 aa13.49□□□□□ -0.25
HDAC8-214ENST00000439122 DHX36Q9H2U1 1008 aaKnown RBP13.49□□□□□ -0.25
HDAC8-214ENST00000439122 NDST4Q9H3R1 872 aa13.49□□□□□ -0.25
HDAC8-214ENST00000439122 FAM207AQ9NSI2 230 aaPredicted RBP13.49□□□□□ -0.25
HDAC8-214ENST00000439122 PI4KBQ9UBF8 816 aa13.49□□□□□ -0.25
HDAC8-214ENST00000439122 BRWD3Q6RI45 1802 aa13.49□□□□□ -0.25
HDAC8-214ENST00000439122 CTAGE15A4D2H0 777 aa13.48□□□□□ -0.25
HDAC8-214ENST00000439122 ENC1O14682 589 aa13.48□□□□□ -0.25
HDAC8-214ENST00000439122 ATP8B1O43520 1251 aa13.48□□□□□ -0.25
HDAC8-214ENST00000439122 KRT86O43790 486 aa13.48□□□□□ -0.25
HDAC8-214ENST00000439122 SASH3O75995 380 aa13.48□□□□□ -0.25
HDAC8-214ENST00000439122 CTAGE8P0CG41 777 aa13.48□□□□□ -0.25
HDAC8-214ENST00000439122 HMGB2P26583 209 aaKnown RBP13.48□□□□□ -0.25
HDAC8-214ENST00000439122 CDC37Q16543 378 aaPredicted RBP13.48□□□□□ -0.25
HDAC8-214ENST00000439122 SLFN13Q68D06 897 aa13.48□□□□□ -0.25
HDAC8-214ENST00000439122 CTAGE6Q86UF2 777 aa13.48□□□□□ -0.25
HDAC8-214ENST00000439122 CTAGE4Q8IX94 777 aa13.48□□□□□ -0.25
HDAC8-214ENST00000439122 JAKMIP2Q96AA8 810 aa13.48□□□□□ -0.25
HDAC8-214ENST00000439122 ANKZF1Q9H8Y5 726 aa13.48□□□□□ -0.25
HDAC8-214ENST00000439122 KANSL2Q9H9L4 492 aa13.48□□□□□ -0.25
HDAC8-214ENST00000439122 ZNF219Q9P2Y4 722 aaPredicted RBP13.48□□□□□ -0.25
HDAC8-214ENST00000439122 ZHX1Q9UKY1 873 aaPredicted RBP13.48□□□□□ -0.25
HDAC8-214ENST00000439122 ATF5Q9Y2D1 282 aaPredicted RBP13.48□□□□□ -0.25
HDAC8-214ENST00000439122 A0A1W2PQJ5 194 aa13.48□□□□□ -0.25
HDAC8-214ENST00000439122 CCDC151A5D8V7 595 aa13.48□□□□□ -0.25
HDAC8-214ENST00000439122 PSMD2Q13200 908 aa13.48□□□□□ -0.25
HDAC8-214ENST00000439122 FIGNQ5HY92 759 aa13.48□□□□□ -0.25
HDAC8-214ENST00000439122 NCAPH2Q6IBW4 605 aa13.48□□□□□ -0.25
HDAC8-214ENST00000439122 CCDC170Q8IYT3 715 aa13.48□□□□□ -0.25
HDAC8-214ENST00000439122 TSG101Q99816 390 aa13.48□□□□□ -0.25
HDAC8-214ENST00000439122 GLT8D2Q9H1C3 349 aa13.48□□□□□ -0.25
HDAC8-214ENST00000439122 BMP2KQ9NSY1 1161 aaPredicted RBP13.48□□□□□ -0.25
HDAC8-214ENST00000439122 KIAA1024Q9UPX6 916 aa13.48□□□□□ -0.25
HDAC8-214ENST00000439122 GREB1LQ9C091 1923 aaPredicted RBP13.48□□□□□ -0.25
HDAC8-214ENST00000439122 PSMD14O00487 310 aa13.47□□□□□ -0.25
HDAC8-214ENST00000439122 RHOXF2BP0C7M4 288 aa13.47□□□□□ -0.25
HDAC8-214ENST00000439122 AMPD2Q01433 879 aa13.47□□□□□ -0.25
HDAC8-214ENST00000439122 CYP27A1Q02318 531 aa13.47□□□□□ -0.25
HDAC8-214ENST00000439122 COASYQ13057 564 aa13.47□□□□□ -0.25
HDAC8-214ENST00000439122 SEPT2Q15019 361 aa13.47□□□□□ -0.25
HDAC8-214ENST00000439122 BRD3Q15059 726 aa13.47□□□□□ -0.25
HDAC8-214ENST00000439122 MAN2A1Q16706 1144 aa13.47□□□□□ -0.25
HDAC8-214ENST00000439122 STRIP1Q5VSL9 837 aa13.47□□□□□ -0.25
HDAC8-214ENST00000439122 MYOCDQ8IZQ8 938 aa13.47□□□□□ -0.25
HDAC8-214ENST00000439122 DCAF4Q8WV16 495 aa13.47□□□□□ -0.25
HDAC8-214ENST00000439122 CCDC42Q96M95 316 aa13.47□□□□□ -0.25
HDAC8-214ENST00000439122 NAP1L4Q99733 375 aaKnown RBP13.47□□□□□ -0.25
HDAC8-214ENST00000439122 RHOXF2Q9BQY4 288 aa13.47□□□□□ -0.25
HDAC8-214ENST00000439122 NT5C3AQ9H0P0 336 aa13.47□□□□□ -0.25
HDAC8-214ENST00000439122 MMRN2Q9H8L6 949 aa13.47□□□□□ -0.25
HDAC8-214ENST00000439122 PANK4Q9NVE7 773 aa13.47□□□□□ -0.25
HDAC8-214ENST00000439122 HDAC6Q9UBN7 1215 aa13.47□□□□□ -0.25
HDAC8-214ENST00000439122 FAM198AQ9UFP1 575 aa13.47□□□□□ -0.25
HDAC8-214ENST00000439122 KDM3AQ9Y4C1 1321 aa13.47□□□□□ -0.25
HDAC8-214ENST00000439122 EIF3CLB5ME19 914 aaKnown RBP13.47□□□□□ -0.25
HDAC8-214ENST00000439122 POTEB2H3BUK9 544 aa13.47□□□□□ -0.25
HDAC8-214ENST00000439122 TUBB4BP68371 445 aa13.47□□□□□ -0.25
HDAC8-214ENST00000439122 ICA1Q05084 483 aa13.47□□□□□ -0.25
HDAC8-214ENST00000439122 EHHADHQ08426 723 aa13.47□□□□□ -0.25
HDAC8-214ENST00000439122 CCDC84Q86UT8 332 aaPredicted RBP13.47□□□□□ -0.25
HDAC8-214ENST00000439122 C2CD5Q86YS7 1000 aa13.47□□□□□ -0.25
HDAC8-214ENST00000439122 EHBP1Q8NDI1 1231 aa13.47□□□□□ -0.25
HDAC8-214ENST00000439122 MKL1Q969V6 931 aa13.47□□□□□ -0.25
HDAC8-214ENST00000439122 AKT1S1Q96B36 256 aa13.47□□□□□ -0.25
HDAC8-214ENST00000439122 DNAJC19Q96DA6 116 aa13.47□□□□□ -0.25
HDAC8-214ENST00000439122 EIF3CQ99613 913 aaKnown RBP13.47□□□□□ -0.25
HDAC8-214ENST00000439122 ANO3Q9BYT9 981 aa13.47□□□□□ -0.25
HDAC8-214ENST00000439122 TANGO6Q9C0B7 1094 aa13.47□□□□□ -0.25
HDAC8-214ENST00000439122 LACRTQ9GZZ8 138 aa13.47□□□□□ -0.25
HDAC8-214ENST00000439122 TBC1D7Q9P0N9 293 aa13.47□□□□□ -0.25
HDAC8-214ENST00000439122 NYAP2Q9P242 653 aa13.47□□□□□ -0.25
HDAC8-214ENST00000439122 COL11A2P13942 1736 aaPredicted RBP13.47□□□□□ -0.25
HDAC8-214ENST00000439122 NRXN2Q9P2S2 1712 aa13.47□□□□□ -0.25
HDAC8-214ENST00000439122 RCCD1A6NED2 376 aa13.46□□□□□ -0.25
HDAC8-214ENST00000439122 E9PMD0 336 aa13.46□□□□□ -0.25
HDAC8-214ENST00000439122 EPHB6O15197 1021 aa13.46□□□□□ -0.25
HDAC8-214ENST00000439122 ECE2O60344 883 aa13.46□□□□□ -0.25
HDAC8-214ENST00000439122 GDF11O95390 407 aa13.46□□□□□ -0.25
HDAC8-214ENST00000439122 PLEKP08567 350 aaPredicted RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms