RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 UAP1Q16222 522 aaPredicted RBP14.76□□□□□ -0.05
ACTN1-204ENST00000438964 LETM2Q2VYF4 491 aa14.76□□□□□ -0.05
ACTN1-204ENST00000438964 FAM133BQ5BKY9 247 aaKnown RBP14.76□□□□□ -0.05
ACTN1-204ENST00000438964 DZIP3Q86Y13 1208 aaKnown RBP14.76□□□□□ -0.05
ACTN1-204ENST00000438964 KIAA0895Q8NCT3 520 aa14.76□□□□□ -0.05
ACTN1-204ENST00000438964 MAGOHBQ96A72 148 aaKnown RBP14.76□□□□□ -0.05
ACTN1-204ENST00000438964 STAMBPL1Q96FJ0 436 aa14.76□□□□□ -0.05
ACTN1-204ENST00000438964 CELF4Q9BZC1 486 aaKnown RBP14.76□□□□□ -0.05
ACTN1-204ENST00000438964 CHD4Q14839 1912 aa14.76□□□□□ -0.05
ACTN1-204ENST00000438964 GMNCA6NCL1 334 aa14.76□□□□□ -0.05
ACTN1-204ENST00000438964 GCOM1H8Y6P7 765 aaPredicted RBP14.76□□□□□ -0.05
ACTN1-204ENST00000438964 MYZAPP0CAP1 466 aa14.76□□□□□ -0.05
ACTN1-204ENST00000438964 SCTRP47872 440 aa14.76□□□□□ -0.05
ACTN1-204ENST00000438964 MYO1EQ12965 1108 aa14.76□□□□□ -0.05
ACTN1-204ENST00000438964 MKRN4PQ13434 485 aaPredicted RBP14.76□□□□□ -0.05
ACTN1-204ENST00000438964 KSR1Q8IVT5 923 aa14.76□□□□□ -0.05
ACTN1-204ENST00000438964 C4orf32Q8N8J7 132 aa14.76□□□□□ -0.05
ACTN1-204ENST00000438964 TBC1D5Q92609 795 aa14.76□□□□□ -0.05
ACTN1-204ENST00000438964 TACO1Q9BSH4 297 aaKnown RBP14.76□□□□□ -0.05
ACTN1-204ENST00000438964 RNF41Q9H4P4 317 aaPredicted RBP14.76□□□□□ -0.05
ACTN1-204ENST00000438964 TLDC2A0PJX2 215 aa14.76□□□□□ -0.05
ACTN1-204ENST00000438964 CCNE1P24864 410 aa14.76□□□□□ -0.05
ACTN1-204ENST00000438964 ANKRD20A8PQ5CZ79 823 aa14.76□□□□□ -0.05
ACTN1-204ENST00000438964 RAPGEF5Q92565 580 aa14.76□□□□□ -0.05
ACTN1-204ENST00000438964 GDF3Q9NR23 364 aa14.76□□□□□ -0.05
ACTN1-204ENST00000438964 FBXL5Q9UKA1 691 aa14.76□□□□□ -0.05
ACTN1-204ENST00000438964 BAZ2AQ9UIF9 1905 aaKnown RBP14.75□□□□□ -0.05
ACTN1-204ENST00000438964 SPEF2Q9C093 1822 aa14.75□□□□□ -0.05
ACTN1-204ENST00000438964 MAGEB6P1A0A0J9YX57 407 aa14.75□□□□□ -0.05
ACTN1-204ENST00000438964 CLGNO14967 610 aa14.75□□□□□ -0.05
ACTN1-204ENST00000438964 CEP104O60308 925 aa14.75□□□□□ -0.05
ACTN1-204ENST00000438964 UQCRFS1P1P0C7P4 283 aa14.75□□□□□ -0.05
ACTN1-204ENST00000438964 RTL9Q8NET4 1388 aa14.75□□□□□ -0.05
ACTN1-204ENST00000438964 BMP15O95972 392 aa14.75□□□□□ -0.05
ACTN1-204ENST00000438964 ITGA4P13612 1032 aa14.75□□□□□ -0.05
ACTN1-204ENST00000438964 SLC5A1P13866 664 aa14.75□□□□□ -0.05
ACTN1-204ENST00000438964 POLR2FP61218 127 aaKnown RBP14.75□□□□□ -0.05
ACTN1-204ENST00000438964 CACNB1Q02641 598 aaPredicted RBP14.75□□□□□ -0.05
ACTN1-204ENST00000438964 KIAA0753Q2KHM9 967 aa14.75□□□□□ -0.05
ACTN1-204ENST00000438964 TBC1D1Q86TI0 1168 aaPredicted RBP14.75□□□□□ -0.05
ACTN1-204ENST00000438964 BLIDQ8IZY5 108 aa14.75□□□□□ -0.05
ACTN1-204ENST00000438964 FAXDC2Q96IV6 333 aa14.75□□□□□ -0.05
ACTN1-204ENST00000438964 NUP58Q9BVL2 599 aa14.75□□□□□ -0.05
ACTN1-204ENST00000438964 TRIM9Q9C026 710 aa14.75□□□□□ -0.05
ACTN1-204ENST00000438964 MTFR1LQ9H019 292 aa14.75□□□□□ -0.05
ACTN1-204ENST00000438964 RHOBTB3O94955 611 aa14.74□□□□□ -0.05
ACTN1-204ENST00000438964 ZNF844Q08AG5 666 aa14.74□□□□□ -0.05
ACTN1-204ENST00000438964 BYSLQ13895 437 aaKnown RBP14.74□□□□□ -0.05
ACTN1-204ENST00000438964 RAPGEF1Q13905 1077 aa14.74□□□□□ -0.05
ACTN1-204ENST00000438964 VWA3BQ502W6 1294 aa14.74□□□□□ -0.05
ACTN1-204ENST00000438964 C6orf89Q6UWU4 347 aa14.74□□□□□ -0.05
ACTN1-204ENST00000438964 CABP7Q86V35 215 aa14.74□□□□□ -0.05
ACTN1-204ENST00000438964 HVCN1Q96D96 273 aa14.74□□□□□ -0.05
ACTN1-204ENST00000438964 VAT1LQ9HCJ6 419 aa14.74□□□□□ -0.05
ACTN1-204ENST00000438964 AMACRQ9UHK6 382 aa14.74□□□□□ -0.05
ACTN1-204ENST00000438964 ATRNO75882 1429 aa14.74□□□□□ -0.05
ACTN1-204ENST00000438964 FER1L4A9Z1Z3 1794 aa14.74□□□□□ -0.05
ACTN1-204ENST00000438964 TMCO5BA8MYB1 307 aa14.74□□□□□ -0.05
ACTN1-204ENST00000438964 DAPK3O43293 454 aa14.74□□□□□ -0.05
ACTN1-204ENST00000438964 IFNAR2P48551 515 aa14.74□□□□□ -0.05
ACTN1-204ENST00000438964 KRT71Q3SY84 523 aa14.74□□□□□ -0.05
ACTN1-204ENST00000438964 SIK3Q9Y2K2 1263 aa14.74□□□□□ -0.05
ACTN1-204ENST00000438964 TULP1O00294 542 aaPredicted RBP14.74□□□□□ -0.05
ACTN1-204ENST00000438964 CCNT1O60563 726 aaKnown RBP14.74□□□□□ -0.05
ACTN1-204ENST00000438964 TLR2O60603 784 aa14.74□□□□□ -0.05
ACTN1-204ENST00000438964 LONP1P36776 959 aaKnown RBP14.74□□□□□ -0.05
ACTN1-204ENST00000438964 UBAP2Q5T6F2 1119 aaKnown RBP14.74□□□□□ -0.05
ACTN1-204ENST00000438964 FAM133AQ8N9E0 248 aa14.74□□□□□ -0.05
ACTN1-204ENST00000438964 ZCRB1Q8TBF4 217 aaKnown RBP14.74□□□□□ -0.05
ACTN1-204ENST00000438964 TMBIM4Q9HC24 238 aa14.74□□□□□ -0.05
ACTN1-204ENST00000438964 GOPCQ9HD26 462 aa14.74□□□□□ -0.05
ACTN1-204ENST00000438964 A0A087X0T9 212 aa14.73□□□□□ -0.05
ACTN1-204ENST00000438964 FAM228BP0C875 321 aa14.73□□□□□ -0.05
ACTN1-204ENST00000438964 EZRP15311 586 aaKnown RBP14.73□□□□□ -0.05
ACTN1-204ENST00000438964 LRCH2Q5VUJ6 765 aa14.73□□□□□ -0.05
ACTN1-204ENST00000438964 MSL1Q68DK7 614 aa14.73□□□□□ -0.05
ACTN1-204ENST00000438964 CACNA2D3Q8IZS8 1091 aa14.73□□□□□ -0.05
ACTN1-204ENST00000438964 SGSM3Q96HU1 749 aa14.73□□□□□ -0.05
ACTN1-204ENST00000438964 SELENOSQ9BQE4 189 aa14.73□□□□□ -0.05
ACTN1-204ENST00000438964 CD2APQ9Y5K6 639 aa14.73□□□□□ -0.05
ACTN1-204ENST00000438964 BUB1BO60566 1050 aaPredicted RBP14.73□□□□□ -0.05
ACTN1-204ENST00000438964 CCNHP51946 323 aaPredicted RBP14.73□□□□□ -0.05
ACTN1-204ENST00000438964 NELFCDQ8IXH7 590 aa14.73□□□□□ -0.05
ACTN1-204ENST00000438964 PRCCQ92733 491 aaPredicted RBP14.73□□□□□ -0.05
ACTN1-204ENST00000438964 CCDC113Q9H0I3 377 aa14.73□□□□□ -0.05
ACTN1-204ENST00000438964 TSPY2A6NKD2 308 aa14.72□□□□□ -0.05
ACTN1-204ENST00000438964 GCFC2P16383 781 aaKnown RBP14.72□□□□□ -0.05
ACTN1-204ENST00000438964 TXKP42681 527 aa14.72□□□□□ -0.05
ACTN1-204ENST00000438964 CDC37Q16543 378 aaPredicted RBP14.72□□□□□ -0.05
ACTN1-204ENST00000438964 BAP1Q92560 729 aa14.72□□□□□ -0.05
ACTN1-204ENST00000438964 KBTBD4Q9NVX7 518 aa14.72□□□□□ -0.05
ACTN1-204ENST00000438964 PNMA2Q9UL42 364 aa14.72□□□□□ -0.05
ACTN1-204ENST00000438964 ATP8A1Q9Y2Q0 1164 aa14.72□□□□□ -0.05
ACTN1-204ENST00000438964 SLIT3O75094 1523 aa14.72□□□□□ -0.05
ACTN1-204ENST00000438964 DHX9Q08211 1270 aaKnown RBP14.72□□□□□ -0.05
ACTN1-204ENST00000438964 ERGIC2Q96RQ1 377 aa14.72□□□□□ -0.05
ACTN1-204ENST00000438964 EME2A4GXA9 379 aaPredicted RBP14.71□□□□□ -0.05
ACTN1-204ENST00000438964 HMGB1P1B2RPK0 211 aaPredicted RBP14.71□□□□□ -0.05
ACTN1-204ENST00000438964 TRAPPC3O43617 180 aa14.71□□□□□ -0.05
ACTN1-204ENST00000438964 KIF1CO43896 1103 aaKnown RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms