RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 ZC3H7AQ8IWR0 971 aaKnown RBP5.44□□□□□ -1.54
LSM1P1-201ENST00000438629 SIRT2Q8IXJ6 389 aa5.44□□□□□ -1.54
LSM1P1-201ENST00000438629 AHI1Q8N157 1196 aa5.44□□□□□ -1.54
LSM1P1-201ENST00000438629 MFSD3Q96ES6 412 aa5.44□□□□□ -1.54
LSM1P1-201ENST00000438629 PEX11GQ96HA9 241 aa5.44□□□□□ -1.54
LSM1P1-201ENST00000438629 INTS4Q96HW7 963 aaKnown RBP5.44□□□□□ -1.54
LSM1P1-201ENST00000438629 CLUHP3Q96NS8 147 aa5.44□□□□□ -1.54
LSM1P1-201ENST00000438629 TRIM39Q9HCM9 518 aa5.44□□□□□ -1.54
LSM1P1-201ENST00000438629 PCDHA9Q9Y5H5 950 aa5.44□□□□□ -1.54
LSM1P1-201ENST00000438629 PCDHA8Q9Y5H6 950 aa5.44□□□□□ -1.54
LSM1P1-201ENST00000438629 KRIT1O00522 736 aa5.43□□□□□ -1.54
LSM1P1-201ENST00000438629 WNT9AO14904 365 aa5.43□□□□□ -1.54
LSM1P1-201ENST00000438629 OPA1O60313 960 aa5.43□□□□□ -1.54
LSM1P1-201ENST00000438629 ZBTB7AO95365 584 aa5.43□□□□□ -1.54
LSM1P1-201ENST00000438629 MSL3P1P0C860 447 aa5.43□□□□□ -1.54
LSM1P1-201ENST00000438629 GRK2P25098 689 aa5.43□□□□□ -1.54
LSM1P1-201ENST00000438629 GRK3P35626 688 aa5.43□□□□□ -1.54
LSM1P1-201ENST00000438629 IGFALSP35858 605 aa5.43□□□□□ -1.54
LSM1P1-201ENST00000438629 PDE6BP35913 854 aa5.43□□□□□ -1.54
LSM1P1-201ENST00000438629 ST5P78524 1137 aa5.43□□□□□ -1.54
LSM1P1-201ENST00000438629 SLC9A5Q14940 896 aa5.43□□□□□ -1.54
LSM1P1-201ENST00000438629 WWC2Q6AWC2 1192 aa5.43□□□□□ -1.54
LSM1P1-201ENST00000438629 MPZL3Q6UWV2 235 aa5.43□□□□□ -1.54
LSM1P1-201ENST00000438629 C16orf59Q7L2K0 433 aa5.43□□□□□ -1.54
LSM1P1-201ENST00000438629 DDX53Q86TM3 631 aaKnown RBP5.43□□□□□ -1.54
LSM1P1-201ENST00000438629 DCP2Q8IU60 420 aaKnown RBP5.43□□□□□ -1.54
LSM1P1-201ENST00000438629 TEX2Q8IWB9 1127 aa5.43□□□□□ -1.54
LSM1P1-201ENST00000438629 FAM177A1Q8N128 213 aaPredicted RBP5.43□□□□□ -1.54
LSM1P1-201ENST00000438629 FAM168AQ92567 244 aa5.43□□□□□ -1.54
LSM1P1-201ENST00000438629 FBXW5Q969U6 566 aa5.43□□□□□ -1.54
LSM1P1-201ENST00000438629 AP5M1Q9H0R1 490 aa5.43□□□□□ -1.54
LSM1P1-201ENST00000438629 TNFRSF12AQ9NP84 129 aa5.43□□□□□ -1.54
LSM1P1-201ENST00000438629 DBR1Q9UK59 544 aaKnown RBP5.43□□□□□ -1.54
LSM1P1-201ENST00000438629 SBNO2Q9Y2G9 1366 aa5.42□□□□□ -1.54
LSM1P1-201ENST00000438629 TCRBV16S1A1N1A0A5B0 115 aa5.42□□□□□ -1.54
LSM1P1-201ENST00000438629 HRKO00198 91 aa5.42□□□□□ -1.54
LSM1P1-201ENST00000438629 PAPLNO95428 1278 aa5.42□□□□□ -1.54
LSM1P1-201ENST00000438629 GLI4P10075 376 aa5.42□□□□□ -1.54
LSM1P1-201ENST00000438629 TACR1P25103 407 aa5.42□□□□□ -1.54
LSM1P1-201ENST00000438629 SLC6A11P48066 632 aa5.42□□□□□ -1.54
LSM1P1-201ENST00000438629 ADGRF1Q5T601 910 aa5.42□□□□□ -1.54
LSM1P1-201ENST00000438629 PCDH19Q8TAB3 1148 aa5.42□□□□□ -1.54
LSM1P1-201ENST00000438629 SEC14L1Q92503 715 aa5.42□□□□□ -1.54
LSM1P1-201ENST00000438629 SCLYQ96I15 445 aa5.42□□□□□ -1.54
LSM1P1-201ENST00000438629 CATSPERZQ9NTU4 200 aa5.42□□□□□ -1.54
LSM1P1-201ENST00000438629 F8W031 263 aaPredicted RBP5.41□□□□□ -1.54
LSM1P1-201ENST00000438629 HGSO14964 777 aaPredicted RBP5.41□□□□□ -1.54
LSM1P1-201ENST00000438629 NTRK1P04629 796 aa5.41□□□□□ -1.54
LSM1P1-201ENST00000438629 DBHP09172 617 aa5.41□□□□□ -1.54
LSM1P1-201ENST00000438629 SRGAP2CP0DJJ0 459 aa5.41□□□□□ -1.54
LSM1P1-201ENST00000438629 GNAT1P11488 350 aa5.41□□□□□ -1.54
LSM1P1-201ENST00000438629 TAL1P17542 331 aaPredicted RBP5.41□□□□□ -1.54
LSM1P1-201ENST00000438629 FPR2P25090 351 aa5.41□□□□□ -1.54
LSM1P1-201ENST00000438629 KIR3DS1Q14943 382 aa5.41□□□□□ -1.54
LSM1P1-201ENST00000438629 RAB3GAP1Q15042 981 aa5.41□□□□□ -1.54
LSM1P1-201ENST00000438629 CRY1Q16526 586 aa5.41□□□□□ -1.54
LSM1P1-201ENST00000438629 C21orf62-AS1Q17RA5 79 aa5.41□□□□□ -1.54
LSM1P1-201ENST00000438629 TM4SF20Q53R12 229 aa5.41□□□□□ -1.54
LSM1P1-201ENST00000438629 CYP4F22Q6NT55 531 aa5.41□□□□□ -1.54
LSM1P1-201ENST00000438629 EP400NLQ6ZTU2 488 aa5.41□□□□□ -1.54
LSM1P1-201ENST00000438629 NLRP10Q86W26 655 aa5.41□□□□□ -1.54
LSM1P1-201ENST00000438629 ANKLE2Q86XL3 938 aa5.41□□□□□ -1.54
LSM1P1-201ENST00000438629 DHX37Q8IY37 1157 aaKnown RBP5.41□□□□□ -1.54
LSM1P1-201ENST00000438629 PPM1KQ8N3J5 372 aa5.41□□□□□ -1.54
LSM1P1-201ENST00000438629 DDX1Q92499 740 aaKnown RBP5.41□□□□□ -1.54
LSM1P1-201ENST00000438629 KCNJ15Q99712 375 aa5.41□□□□□ -1.54
LSM1P1-201ENST00000438629 CDIP1Q9H305 208 aa5.41□□□□□ -1.54
LSM1P1-201ENST00000438629 IPPKQ9H8X2 491 aa5.41□□□□□ -1.54
LSM1P1-201ENST00000438629 SLC6A20Q9NP91 592 aa5.41□□□□□ -1.54
LSM1P1-201ENST00000438629 DNAJC8O75937 253 aaPredicted RBP5.4□□□□□ -1.54
LSM1P1-201ENST00000438629 RASGRP1O95267 797 aa5.4□□□□□ -1.54
LSM1P1-201ENST00000438629 EFEMP2O95967 443 aa5.4□□□□□ -1.54
LSM1P1-201ENST00000438629 NCLP19338 710 aaKnown RBP5.4□□□□□ -1.54
LSM1P1-201ENST00000438629 SDSP20132 328 aa5.4□□□□□ -1.54
LSM1P1-201ENST00000438629 POU3F2P20265 443 aaPredicted RBP5.4□□□□□ -1.54
LSM1P1-201ENST00000438629 MAPKAPK2P49137 400 aa5.4□□□□□ -1.54
LSM1P1-201ENST00000438629 YBX1P67809 324 aaKnown RBP5.4□□□□□ -1.54
LSM1P1-201ENST00000438629 CFAP100Q494V2 611 aa5.4□□□□□ -1.54
LSM1P1-201ENST00000438629 ZCCHC8Q6NZY4 707 aaKnown RBP5.4□□□□□ -1.54
LSM1P1-201ENST00000438629 CNNM4Q6P4Q7 775 aa5.4□□□□□ -1.54
LSM1P1-201ENST00000438629 OTOP3Q7RTS5 596 aa5.4□□□□□ -1.54
LSM1P1-201ENST00000438629 FGD2Q7Z6J4 655 aa5.4□□□□□ -1.54
LSM1P1-201ENST00000438629 LRRTM3Q86VH5 581 aa5.4□□□□□ -1.54
LSM1P1-201ENST00000438629 TRIM48Q8IWZ4 208 aa5.4□□□□□ -1.54
LSM1P1-201ENST00000438629 NLGN4XQ8N0W4 816 aa5.4□□□□□ -1.54
LSM1P1-201ENST00000438629 PHOSPHO1Q8TCT1 267 aa5.4□□□□□ -1.54
LSM1P1-201ENST00000438629 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.4□□□□□ -1.54
LSM1P1-201ENST00000438629 WNK4Q96J92 1243 aa5.4□□□□□ -1.54
LSM1P1-201ENST00000438629 JAM3Q9BX67 310 aa5.4□□□□□ -1.54
LSM1P1-201ENST00000438629 CELF4Q9BZC1 486 aaKnown RBP5.4□□□□□ -1.54
LSM1P1-201ENST00000438629 SMOC1Q9H4F8 434 aa5.4□□□□□ -1.54
LSM1P1-201ENST00000438629 ZNF552Q9H707 407 aaPredicted RBP5.4□□□□□ -1.54
LSM1P1-201ENST00000438629 SPC25Q9HBM1 224 aa5.4□□□□□ -1.54
LSM1P1-201ENST00000438629 FBXL7Q9UJT9 491 aa5.4□□□□□ -1.54
LSM1P1-201ENST00000438629 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.4□□□□□ -1.54
LSM1P1-201ENST00000438629 MAPRE3Q9UPY8 281 aa5.4□□□□□ -1.54
LSM1P1-201ENST00000438629 TNPO3Q9Y5L0 923 aaKnown RBP5.4□□□□□ -1.54
LSM1P1-201ENST00000438629 CCDC66A2RUB6 948 aa5.39□□□□□ -1.55
LSM1P1-201ENST00000438629 NUDT19A8MXV4 375 aa5.39□□□□□ -1.55
LSM1P1-201ENST00000438629 PEX10O60683 326 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms