RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 HNRNPLLQ8WVV9 542 aaKnown RBP7.34□□□□□ -1.24
CSDE1-205ENST00000438362 TMEM47Q9BQJ4 181 aa7.34□□□□□ -1.24
CSDE1-205ENST00000438362 CCSER1Q9C0I3 900 aa7.34□□□□□ -1.24
CSDE1-205ENST00000438362 KCND1Q9NSA2 647 aa7.34□□□□□ -1.24
CSDE1-205ENST00000438362 ADAMTS1Q9UHI8 967 aa7.34□□□□□ -1.24
CSDE1-205ENST00000438362 ZBTB21Q9ULJ3 1066 aa7.34□□□□□ -1.24
CSDE1-205ENST00000438362 PCDHA1Q9Y5I3 950 aa7.34□□□□□ -1.24
CSDE1-205ENST00000438362 XDHP47989 1333 aa7.33□□□□□ -1.24
CSDE1-205ENST00000438362 PVALEFA0A1B0GWK0 134 aa7.33□□□□□ -1.24
CSDE1-205ENST00000438362 TARSL2A2RTX5 802 aaKnown RBP7.33□□□□□ -1.24
CSDE1-205ENST00000438362 PGRMC1O00264 195 aaKnown RBP7.33□□□□□ -1.24
CSDE1-205ENST00000438362 RGS16O15492 202 aaPredicted RBP7.33□□□□□ -1.24
CSDE1-205ENST00000438362 GLE1Q53GS7 698 aaKnown RBP7.33□□□□□ -1.24
CSDE1-205ENST00000438362 GKAP1Q5VSY0 366 aaPredicted RBP7.33□□□□□ -1.24
CSDE1-205ENST00000438362 TRIM65Q6PJ69 517 aa7.33□□□□□ -1.24
CSDE1-205ENST00000438362 TMED8Q6PL24 325 aaPredicted RBP7.33□□□□□ -1.24
CSDE1-205ENST00000438362 TAOK1Q7L7X3 1001 aa7.33□□□□□ -1.24
CSDE1-205ENST00000438362 FOXP4Q8IVH2 680 aaPredicted RBP7.33□□□□□ -1.24
CSDE1-205ENST00000438362 TPH2Q8IWU9 490 aa7.33□□□□□ -1.24
CSDE1-205ENST00000438362 WHAMMQ8TF30 809 aa7.33□□□□□ -1.24
CSDE1-205ENST00000438362 MLXIPQ9HAP2 919 aa7.33□□□□□ -1.24
CSDE1-205ENST00000438362 ASIC3Q9UHC3 531 aa7.33□□□□□ -1.24
CSDE1-205ENST00000438362 LRRC53A6NM62 1247 aa7.33□□□□□ -1.24
CSDE1-205ENST00000438362 PPP1R3GB7ZBB8 358 aa7.33□□□□□ -1.24
CSDE1-205ENST00000438362 PLCB3Q01970 1234 aa7.33□□□□□ -1.24
CSDE1-205ENST00000438362 RDH13Q8NBN7 331 aa7.33□□□□□ -1.24
CSDE1-205ENST00000438362 KIFAP3Q92845 792 aa7.33□□□□□ -1.24
CSDE1-205ENST00000438362 GJA10Q969M2 543 aa7.33□□□□□ -1.24
CSDE1-205ENST00000438362 MMS19Q96T76 1030 aa7.33□□□□□ -1.24
CSDE1-205ENST00000438362 FUT8Q9BYC5 575 aa7.33□□□□□ -1.24
CSDE1-205ENST00000438362 PKD2L1Q9P0L9 805 aa7.33□□□□□ -1.24
CSDE1-205ENST00000438362 NFU1Q9UMS0 254 aa7.33□□□□□ -1.24
CSDE1-205ENST00000438362 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.33□□□□□ -1.24
CSDE1-205ENST00000438362 IKBKGQ9Y6K9 419 aa7.33□□□□□ -1.24
CSDE1-205ENST00000438362 KDM6AO15550 1401 aaPredicted RBP7.33□□□□□ -1.24
CSDE1-205ENST00000438362 TCHHQ07283 1943 aa7.33□□□□□ -1.24
CSDE1-205ENST00000438362 CFBP00751 764 aa7.33□□□□□ -1.24
CSDE1-205ENST00000438362 ZNF18P17022 549 aa7.33□□□□□ -1.24
CSDE1-205ENST00000438362 CDK8P49336 464 aa7.33□□□□□ -1.24
CSDE1-205ENST00000438362 CYP2J2P51589 502 aa7.33□□□□□ -1.24
CSDE1-205ENST00000438362 IRX5P78411 483 aaPredicted RBP7.33□□□□□ -1.24
CSDE1-205ENST00000438362 TCP10Q12799 353 aa7.33□□□□□ -1.24
CSDE1-205ENST00000438362 PABPC4Q13310 644 aaKnown RBP eCLIP7.33□□□□□ -1.245e-11■■■□□ 15.5
CSDE1-205ENST00000438362 GRM4Q14833 912 aa7.33□□□□□ -1.24
CSDE1-205ENST00000438362 NAA35Q5VZE5 725 aa7.33□□□□□ -1.24
CSDE1-205ENST00000438362 FAM84BQ96KN1 310 aaPredicted RBP7.33□□□□□ -1.24
CSDE1-205ENST00000438362 IFT74Q96LB3 600 aa7.33□□□□□ -1.24
CSDE1-205ENST00000438362 OSBPL9Q96SU4 736 aa7.33□□□□□ -1.24
CSDE1-205ENST00000438362 CPVLQ9H3G5 476 aa7.33□□□□□ -1.24
CSDE1-205ENST00000438362 VIPAS39Q9H9C1 493 aa7.33□□□□□ -1.24
CSDE1-205ENST00000438362 EMILIN3Q9NT22 766 aa7.33□□□□□ -1.24
CSDE1-205ENST00000438362 BARHL2Q9NY43 387 aa7.33□□□□□ -1.24
CSDE1-205ENST00000438362 PSD3Q9NYI0 1048 aa7.33□□□□□ -1.24
CSDE1-205ENST00000438362 PARP2Q9UGN5 583 aa7.33□□□□□ -1.24
CSDE1-205ENST00000438362 COL15A1P39059 1388 aa7.33□□□□□ -1.24
CSDE1-205ENST00000438362 AFPP02771 609 aaKnown RBP7.32□□□□□ -1.24
CSDE1-205ENST00000438362 NR1D1P20393 614 aa7.32□□□□□ -1.24
CSDE1-205ENST00000438362 CYP4A11Q02928 519 aa7.32□□□□□ -1.24
CSDE1-205ENST00000438362 IFT88Q13099 833 aa7.32□□□□□ -1.24
CSDE1-205ENST00000438362 SETDB1Q15047 1291 aa7.32□□□□□ -1.24
CSDE1-205ENST00000438362 MAEAQ7L5Y9 396 aa7.32□□□□□ -1.24
CSDE1-205ENST00000438362 KRT26Q7Z3Y9 468 aa7.32□□□□□ -1.24
CSDE1-205ENST00000438362 PNMA8AQ86V59 439 aaPredicted RBP7.32□□□□□ -1.24
CSDE1-205ENST00000438362 ZNF34Q8IZ26 560 aa7.32□□□□□ -1.24
CSDE1-205ENST00000438362 OGFOD1Q8N543 542 aa7.32□□□□□ -1.24
CSDE1-205ENST00000438362 RNF10Q8N5U6 811 aaKnown RBP7.32□□□□□ -1.24
CSDE1-205ENST00000438362 NOA1Q8NC60 698 aaKnown RBP7.32□□□□□ -1.24
CSDE1-205ENST00000438362 LRRN4CLQ8ND94 238 aa7.32□□□□□ -1.24
CSDE1-205ENST00000438362 CELF1Q92879 486 aaKnown RBP7.32□□□□□ -1.24
CSDE1-205ENST00000438362 PBKQ96KB5 322 aa7.32□□□□□ -1.24
CSDE1-205ENST00000438362 HDAC9Q9UKV0 1011 aa7.32□□□□□ -1.24
CSDE1-205ENST00000438362 TTLL1O95922 423 aa7.32□□□□□ -1.24
CSDE1-205ENST00000438362 SRGNP10124 158 aa7.32□□□□□ -1.24
CSDE1-205ENST00000438362 FERP16591 822 aa7.32□□□□□ -1.24
CSDE1-205ENST00000438362 DSG3P32926 999 aa7.32□□□□□ -1.24
CSDE1-205ENST00000438362 LACTBP83111 547 aaPredicted RBP7.32□□□□□ -1.24
CSDE1-205ENST00000438362 SF3A3Q12874 501 aaKnown RBP eCLIP7.32□□□□□ -1.24
CSDE1-205ENST00000438362 C10orf76Q5T2E6 689 aa7.32□□□□□ -1.24
CSDE1-205ENST00000438362 RBM26Q5T8P6 1007 aaKnown RBP7.32□□□□□ -1.24
CSDE1-205ENST00000438362 NFRKBQ6P4R8 1299 aa7.32□□□□□ -1.24
CSDE1-205ENST00000438362 ZNF365Q70YC5 407 aa7.32□□□□□ -1.24
CSDE1-205ENST00000438362 ADAT2Q7Z6V5 191 aaKnown RBP7.32□□□□□ -1.24
CSDE1-205ENST00000438362 PROM2Q8N271 834 aa7.32□□□□□ -1.24
CSDE1-205ENST00000438362 GUF1Q8N442 669 aaKnown RBP7.32□□□□□ -1.24
CSDE1-205ENST00000438362 FBF1Q8TES7 1133 aa7.32□□□□□ -1.24
CSDE1-205ENST00000438362 TEKT1Q969V4 418 aa7.32□□□□□ -1.24
CSDE1-205ENST00000438362 RSRC1Q96IZ7 334 aaKnown RBP7.32□□□□□ -1.24
CSDE1-205ENST00000438362 IMPG2Q9BZV3 1241 aa7.32□□□□□ -1.24
CSDE1-205ENST00000438362 TRIM9Q9C026 710 aa7.32□□□□□ -1.24
CSDE1-205ENST00000438362 EFCC1Q9HA90 598 aa7.32□□□□□ -1.24
CSDE1-205ENST00000438362 TRIM10Q9UDY6 481 aa7.32□□□□□ -1.24
CSDE1-205ENST00000438362 DLG5Q8TDM6 1919 aa7.32□□□□□ -1.24
CSDE1-205ENST00000438362 A0A1B0GUA9 196 aa7.32□□□□□ -1.24
CSDE1-205ENST00000438362 FAM170AA1A519 330 aa7.32□□□□□ -1.24
CSDE1-205ENST00000438362 CCDC169A6NNP5 214 aa7.32□□□□□ -1.24
CSDE1-205ENST00000438362 RHOBTB3O94955 611 aa7.32□□□□□ -1.24
CSDE1-205ENST00000438362 PLA2G4BP0C869 781 aa7.32□□□□□ -1.24
CSDE1-205ENST00000438362 KRT5P13647 590 aa7.32□□□□□ -1.24
CSDE1-205ENST00000438362 PDCLQ13371 301 aa7.32□□□□□ -1.24
CSDE1-205ENST00000438362 ANKRD40Q6AI12 368 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms