RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 CCDC22O60826 627 aa12.45□□□□□ -0.42
PTCH1-209ENST00000437951 TOM1L1O75674 476 aa12.45□□□□□ -0.42
PTCH1-209ENST00000437951 MFAP3P55082 362 aa12.45□□□□□ -0.42
PTCH1-209ENST00000437951 DZIP3Q86Y13 1208 aaKnown RBP12.45□□□□□ -0.42
PTCH1-209ENST00000437951 PICK1Q9NRD5 415 aa12.45□□□□□ -0.42
PTCH1-209ENST00000437951 ARHGEF12Q9NZN5 1544 aa12.45□□□□□ -0.42
PTCH1-209ENST00000437951 TNNC2P02585 160 aa12.45□□□□□ -0.42
PTCH1-209ENST00000437951 LUZP2Q86TE4 346 aa12.45□□□□□ -0.42
PTCH1-209ENST00000437951 MAML3Q96JK9 1138 aa12.45□□□□□ -0.42
PTCH1-209ENST00000437951 DSCC1Q9BVC3 393 aa12.45□□□□□ -0.42
PTCH1-209ENST00000437951 UTP6Q9NYH9 597 aaKnown RBP12.45□□□□□ -0.42
PTCH1-209ENST00000437951 IL1RAPL1Q9NZN1 696 aa12.45□□□□□ -0.42
PTCH1-209ENST00000437951 PTPN22Q9Y2R2 807 aa12.45□□□□□ -0.42
PTCH1-209ENST00000437951 KRT37O76014 449 aa12.44□□□□□ -0.42
PTCH1-209ENST00000437951 DDIT3P35638 169 aa12.44□□□□□ -0.42
PTCH1-209ENST00000437951 DR1Q01658 176 aa12.44□□□□□ -0.42
PTCH1-209ENST00000437951 TRAF7Q6Q0C0 670 aa12.44□□□□□ -0.42
PTCH1-209ENST00000437951 CNGB3Q9NQW8 809 aa12.44□□□□□ -0.42
PTCH1-209ENST00000437951 GOLGA8MH3BSY2 632 aa12.44□□□□□ -0.42
PTCH1-209ENST00000437951 ZC3H12BQ5HYM0 836 aaKnown RBP12.44□□□□□ -0.42
PTCH1-209ENST00000437951 EHD2Q9NZN4 543 aa12.44□□□□□ -0.42
PTCH1-209ENST00000437951 INTUQ9ULD6 942 aa12.44□□□□□ -0.42
PTCH1-209ENST00000437951 KRT16P08779 473 aa12.44□□□□□ -0.42
PTCH1-209ENST00000437951 SPOUT1Q5T280 376 aaKnown RBP12.44□□□□□ -0.42
PTCH1-209ENST00000437951 APPBP2Q92624 585 aa12.44□□□□□ -0.42
PTCH1-209ENST00000437951 ASPSCR1Q9BZE9 553 aa12.44□□□□□ -0.42
PTCH1-209ENST00000437951 UBE4BO95155 1302 aa12.44□□□□□ -0.42
PTCH1-209ENST00000437951 KPNA7A9QM74 516 aa12.44□□□□□ -0.42
PTCH1-209ENST00000437951 E2F6O75461 281 aa12.44□□□□□ -0.42
PTCH1-209ENST00000437951 DEPDC1BQ8WUY9 529 aa12.44□□□□□ -0.42
PTCH1-209ENST00000437951 E7ENQ6 273 aa12.44□□□□□ -0.42
PTCH1-209ENST00000437951 RPN1P04843 607 aaKnown RBP12.44□□□□□ -0.42
PTCH1-209ENST00000437951 PLS3P13797 630 aa12.44□□□□□ -0.42
PTCH1-209ENST00000437951 NUGGCQ68CJ6 796 aa12.44□□□□□ -0.42
PTCH1-209ENST00000437951 KIRREL3Q8IZU9 778 aa12.44□□□□□ -0.42
PTCH1-209ENST00000437951 REXO1Q8N1G1 1221 aaKnown RBP12.44□□□□□ -0.42
PTCH1-209ENST00000437951 ATP6V1E2Q96A05 226 aa12.44□□□□□ -0.42
PTCH1-209ENST00000437951 NUDCD1Q96RS6 583 aa12.44□□□□□ -0.42
PTCH1-209ENST00000437951 CYTH2Q99418 400 aa12.44□□□□□ -0.42
PTCH1-209ENST00000437951 GEMIN8Q9NWZ8 242 aaKnown RBP12.44□□□□□ -0.42
PTCH1-209ENST00000437951 NDUFA13Q9P0J0 144 aa12.44□□□□□ -0.42
PTCH1-209ENST00000437951 GON4LQ3T8J9 2241 aa12.44□□□□□ -0.42
PTCH1-209ENST00000437951 GOLGA8TH3BQL2 631 aa12.44□□□□□ -0.42
PTCH1-209ENST00000437951 H7C0C1 242 aa12.44□□□□□ -0.42
PTCH1-209ENST00000437951 TOM1O60784 492 aa12.44□□□□□ -0.42
PTCH1-209ENST00000437951 WDR47O94967 919 aa12.44□□□□□ -0.42
PTCH1-209ENST00000437951 GOLGA8HP0CJ92 632 aa12.44□□□□□ -0.42
PTCH1-209ENST00000437951 DDX5P17844 614 aaKnown RBP12.44□□□□□ -0.42
PTCH1-209ENST00000437951 GPTP24298 496 aa12.44□□□□□ -0.42
PTCH1-209ENST00000437951 ATP5OP48047 213 aa12.44□□□□□ -0.42
PTCH1-209ENST00000437951 KRT40Q6A162 431 aa12.44□□□□□ -0.42
PTCH1-209ENST00000437951 CADPS2Q86UW7 1296 aa12.44□□□□□ -0.42
PTCH1-209ENST00000437951 MAST3O60307 1309 aa12.43□□□□□ -0.42
PTCH1-209ENST00000437951 PDE6AP16499 860 aa12.43□□□□□ -0.42
PTCH1-209ENST00000437951 PTK2Q05397 1052 aa12.43□□□□□ -0.42
PTCH1-209ENST00000437951 C19orf60Q96EN9 201 aa12.43□□□□□ -0.42
PTCH1-209ENST00000437951 NOVA2Q9UNW9 492 aaKnown RBP12.43□□□□□ -0.42
PTCH1-209ENST00000437951 MORC2Q9Y6X9 1032 aaPredicted RBP12.43□□□□□ -0.42
PTCH1-209ENST00000437951 MAP4P27816 1152 aaKnown RBP12.43□□□□□ -0.42
PTCH1-209ENST00000437951 AARSP49588 968 aaKnown RBP eCLIP12.43□□□□□ -0.42
PTCH1-209ENST00000437951 RASSF7Q02833 373 aa12.43□□□□□ -0.42
PTCH1-209ENST00000437951 ADCK1Q86TW2 530 aa12.43□□□□□ -0.42
PTCH1-209ENST00000437951 MORF4L2Q15014 288 aa12.43□□□□□ -0.42
PTCH1-209ENST00000437951 MYSM1Q5VVJ2 828 aa12.43□□□□□ -0.42
PTCH1-209ENST00000437951 TOPBP1Q92547 1522 aa12.43□□□□□ -0.42
PTCH1-209ENST00000437951 SBNO2Q9Y2G9 1366 aa12.43□□□□□ -0.42
PTCH1-209ENST00000437951 LOC102724159A0A0B4J2E5 919 aa12.43□□□□□ -0.42
PTCH1-209ENST00000437951 ATP5J2-PTCD1G3V325 749 aa12.43□□□□□ -0.42
PTCH1-209ENST00000437951 CAPN9O14815 690 aa12.43□□□□□ -0.42
PTCH1-209ENST00000437951 GSNP06396 782 aa12.43□□□□□ -0.42
PTCH1-209ENST00000437951 PAMP19021 973 aa12.43□□□□□ -0.42
PTCH1-209ENST00000437951 OCRLQ01968 901 aa12.43□□□□□ -0.42
PTCH1-209ENST00000437951 PWP2Q15269 919 aaKnown RBP12.43□□□□□ -0.42
PTCH1-209ENST00000437951 EXOC3L4Q17RC7 722 aa12.43□□□□□ -0.42
PTCH1-209ENST00000437951 PANK4Q9NVE7 773 aa12.43□□□□□ -0.42
PTCH1-209ENST00000437951 SYNGAP1Q96PV0 1343 aa12.43□□□□□ -0.42
PTCH1-209ENST00000437951 IQCA1LA6NCM1 817 aa12.43□□□□□ -0.42
PTCH1-209ENST00000437951 ZNF233A6NK53 670 aa12.43□□□□□ -0.42
PTCH1-209ENST00000437951 NOSTRINQ8IVI9 506 aa12.43□□□□□ -0.42
PTCH1-209ENST00000437951 PIK3R5Q8WYR1 880 aa12.43□□□□□ -0.42
PTCH1-209ENST00000437951 TRIM63Q969Q1 353 aa12.43□□□□□ -0.42
PTCH1-209ENST00000437951 MOV10L1Q9BXT6 1211 aaKnown RBP12.43□□□□□ -0.42
PTCH1-209ENST00000437951 ECT2Q9H8V3 914 aa12.43□□□□□ -0.42
PTCH1-209ENST00000437951 TMEM191CA6NGB0 347 aa12.43□□□□□ -0.42
PTCH1-209ENST00000437951 TMEM191BP0C7N4 346 aa12.43□□□□□ -0.42
PTCH1-209ENST00000437951 PLTPP55058 493 aa12.43□□□□□ -0.42
PTCH1-209ENST00000437951 RGS9BPQ6ZS82 235 aa12.43□□□□□ -0.42
PTCH1-209ENST00000437951 ABCC5O15440 1437 aa12.42□□□□□ -0.42
PTCH1-209ENST00000437951 PPP6R2O75170 966 aa12.42□□□□□ -0.42
PTCH1-209ENST00000437951 CNGA3Q16281 694 aa12.42□□□□□ -0.42
PTCH1-209ENST00000437951 SMYD2Q9NRG4 433 aa12.42□□□□□ -0.42
PTCH1-209ENST00000437951 RASSF9O75901 435 aa12.42□□□□□ -0.42
PTCH1-209ENST00000437951 CCND1P24385 295 aa12.42□□□□□ -0.42
PTCH1-209ENST00000437951 ELF1P32519 619 aa12.42□□□□□ -0.42
PTCH1-209ENST00000437951 TRMT44Q8IYL2 757 aaKnown RBP12.42□□□□□ -0.42
PTCH1-209ENST00000437951 SERTAD1Q9UHV2 236 aa12.42□□□□□ -0.42
PTCH1-209ENST00000437951 PARP3Q9Y6F1 533 aa12.42□□□□□ -0.42
PTCH1-209ENST00000437951 IL10P22301 178 aa12.42□□□□□ -0.42
PTCH1-209ENST00000437951 HSPA13P48723 471 aa12.42□□□□□ -0.42
PTCH1-209ENST00000437951 RAD23BP54727 409 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms