RNA–Protein interactions for RNA: ENST00000437654.5

IRF1-203, Transcript of interferon regulatory factor 1, humanhuman

TSL 3

Gene IRF1, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-203ENST00000437654 ABHD8Q96I13 439 aa20.77■□□□□ 0.92
IRF1-203ENST00000437654 UNC93B1Q9H1C4 597 aa20.77■□□□□ 0.92
IRF1-203ENST00000437654 TMEM260Q9NX78 707 aa20.77■□□□□ 0.92
IRF1-203ENST00000437654 DDX20Q9UHI6 824 aaKnown RBP20.77■□□□□ 0.92
IRF1-203ENST00000437654 ZHX1Q9UKY1 873 aaPredicted RBP20.77■□□□□ 0.92
IRF1-203ENST00000437654 CNGA1P29973 690 aa20.76■□□□□ 0.91
IRF1-203ENST00000437654 CCND3P30281 292 aaPredicted RBP20.76■□□□□ 0.91
IRF1-203ENST00000437654 ICAM3P32942 547 aa20.76■□□□□ 0.91
IRF1-203ENST00000437654 MRPS9P82933 396 aaKnown RBP20.76■□□□□ 0.91
IRF1-203ENST00000437654 ARHGAP4P98171 946 aa20.76■□□□□ 0.91
IRF1-203ENST00000437654 TTLL4Q14679 1199 aa20.76■□□□□ 0.91
IRF1-203ENST00000437654 MTFR1Q15390 333 aa20.76■□□□□ 0.91
IRF1-203ENST00000437654 CCDC144BQ3MJ40 725 aa20.76■□□□□ 0.91
IRF1-203ENST00000437654 LARP1BQ659C4 914 aaKnown RBP20.76■□□□□ 0.91
IRF1-203ENST00000437654 NLRX1Q86UT6 975 aa20.76■□□□□ 0.91
IRF1-203ENST00000437654 CDHR1Q96JP9 859 aa20.76■□□□□ 0.91
IRF1-203ENST00000437654 INPP4AQ96PE3 977 aaPredicted RBP20.76■□□□□ 0.91
IRF1-203ENST00000437654 FOXP1Q9H334 677 aaPredicted RBP20.76■□□□□ 0.91
IRF1-203ENST00000437654 GJB4Q9NTQ9 266 aa20.76■□□□□ 0.91
IRF1-203ENST00000437654 LCTP09848 1927 aa20.76■□□□□ 0.91
IRF1-203ENST00000437654 CCDC194A0A1B0GVG4 234 aa20.75■□□□□ 0.91
IRF1-203ENST00000437654 DTNBO60941 627 aa20.75■□□□□ 0.91
IRF1-203ENST00000437654 DUSP11O75319 330 aaKnown RBP20.75■□□□□ 0.91
IRF1-203ENST00000437654 HSP90AA1P07900 732 aaKnown RBP20.75■□□□□ 0.91
IRF1-203ENST00000437654 NONOQ15233 471 aaKnown RBP eCLIP20.75■□□□□ 0.91
IRF1-203ENST00000437654 NIPA1Q7RTP0 329 aa20.75■□□□□ 0.91
IRF1-203ENST00000437654 DIS3L2Q8IYB7 885 aaKnown RBP20.75■□□□□ 0.91
IRF1-203ENST00000437654 GPRASP2Q96D09 838 aa20.75■□□□□ 0.91
IRF1-203ENST00000437654 NAP1L4Q99733 375 aaKnown RBP20.75■□□□□ 0.91
IRF1-203ENST00000437654 UBIAD1Q9Y5Z9 338 aa20.75■□□□□ 0.91
IRF1-203ENST00000437654 SGPL1O95470 568 aa20.74■□□□□ 0.91
IRF1-203ENST00000437654 RARBP10826 455 aa20.74■□□□□ 0.91
IRF1-203ENST00000437654 CIITAP33076 1130 aa20.74■□□□□ 0.91
IRF1-203ENST00000437654 TNFAIP2Q03169 654 aa20.74■□□□□ 0.91
IRF1-203ENST00000437654 DUSP28Q4G0W2 176 aa20.74■□□□□ 0.91
IRF1-203ENST00000437654 MOXD1Q6UVY6 613 aa20.74■□□□□ 0.91
IRF1-203ENST00000437654 EEPD1Q7L9B9 569 aa20.74■□□□□ 0.91
IRF1-203ENST00000437654 FBXO16Q8IX29 292 aaPredicted RBP20.74■□□□□ 0.91
IRF1-203ENST00000437654 IL31RAQ8NI17 732 aa20.74■□□□□ 0.91
IRF1-203ENST00000437654 WDR11Q9BZH6 1224 aa20.74■□□□□ 0.91
IRF1-203ENST00000437654 JADE2Q9NQC1 790 aa20.74■□□□□ 0.91
IRF1-203ENST00000437654 BTBD18B2RXH4 712 aa20.73■□□□□ 0.91
IRF1-203ENST00000437654 SPATA31C2B4DYI2 1134 aa20.73■□□□□ 0.91
IRF1-203ENST00000437654 ADAMTS3O15072 1205 aa20.73■□□□□ 0.91
IRF1-203ENST00000437654 FIBPO43427 364 aa20.73■□□□□ 0.91
IRF1-203ENST00000437654 RGS20O76081 388 aa20.73■□□□□ 0.91
IRF1-203ENST00000437654 GJA8P48165 433 aa20.73■□□□□ 0.91
IRF1-203ENST00000437654 NKX3-2P78367 333 aa20.73■□□□□ 0.91
IRF1-203ENST00000437654 CEP55Q53EZ4 464 aa20.73■□□□□ 0.91
IRF1-203ENST00000437654 LHX8Q68G74 356 aa20.73■□□□□ 0.91
IRF1-203ENST00000437654 CCDC62Q6P9F0 684 aa20.73■□□□□ 0.91
IRF1-203ENST00000437654 RASGRP4Q8TDF6 673 aa20.73■□□□□ 0.91
IRF1-203ENST00000437654 TBCKQ8TEA7 893 aa20.73■□□□□ 0.91
IRF1-203ENST00000437654 TNFRSF25Q93038 417 aa20.73■□□□□ 0.91
IRF1-203ENST00000437654 MXRA8Q9BRK3 442 aa20.73■□□□□ 0.91
IRF1-203ENST00000437654 CRISPLD2Q9H0B8 497 aa20.73■□□□□ 0.91
IRF1-203ENST00000437654 H3BQV1 296 aa20.72■□□□□ 0.91
IRF1-203ENST00000437654 MEIS1O00470 390 aa20.72■□□□□ 0.91
IRF1-203ENST00000437654 U2AF2P26368 475 aaKnown RBP eCLIP20.72■□□□□ 0.91
IRF1-203ENST00000437654 ZNF76P36508 570 aa20.72■□□□□ 0.91
IRF1-203ENST00000437654 IFFO2Q5TF58 517 aa20.72■□□□□ 0.91
IRF1-203ENST00000437654 SEPT14Q6ZU15 432 aa20.72■□□□□ 0.91
IRF1-203ENST00000437654 GIMAP8Q8ND71 665 aaPredicted RBP20.72■□□□□ 0.91
IRF1-203ENST00000437654 OXER1Q8TDS5 423 aa20.72■□□□□ 0.91
IRF1-203ENST00000437654 PGBD1Q96JS3 809 aa20.72■□□□□ 0.91
IRF1-203ENST00000437654 DEFB118Q96PH6 123 aa20.72■□□□□ 0.91
IRF1-203ENST00000437654 SENP7Q9BQF6 1050 aa20.72■□□□□ 0.91
IRF1-203ENST00000437654 SPC25Q9HBM1 224 aa20.72■□□□□ 0.91
IRF1-203ENST00000437654 PDGFCQ9NRA1 345 aa20.72■□□□□ 0.91
IRF1-203ENST00000437654 DDX41Q9UJV9 622 aaKnown RBP20.72■□□□□ 0.91
IRF1-203ENST00000437654 OGDHLQ9ULD0 1010 aa20.72■□□□□ 0.91
IRF1-203ENST00000437654 GNEQ9Y223 722 aaKnown RBP20.72■□□□□ 0.91
IRF1-203ENST00000437654 CYP3A7-CYP3A51PA0A087WV96 503 aa20.71■□□□□ 0.91
IRF1-203ENST00000437654 TXNP10599 105 aaKnown RBP20.71■□□□□ 0.91
IRF1-203ENST00000437654 ITGB5P18084 799 aa20.71■□□□□ 0.91
IRF1-203ENST00000437654 CYP3A7P24462 503 aa20.71■□□□□ 0.91
IRF1-203ENST00000437654 ADCYAP1R1P41586 468 aa20.71■□□□□ 0.91
IRF1-203ENST00000437654 ARRDC4Q8NCT1 418 aa20.71■□□□□ 0.91
IRF1-203ENST00000437654 U2AF1L4Q8WU68 220 aaKnown RBP20.71■□□□□ 0.91
IRF1-203ENST00000437654 RTEL1Q9NZ71 1219 aa20.71■□□□□ 0.91
IRF1-203ENST00000437654 MRVI1Q9Y6F6 885 aa20.71■□□□□ 0.91
IRF1-203ENST00000437654 DDX49Q9Y6V7 483 aaKnown RBP20.71■□□□□ 0.91
IRF1-203ENST00000437654 GCFC2P16383 781 aaKnown RBP20.7■□□□□ 0.9
IRF1-203ENST00000437654 SMPD1P17405 629 aa20.7■□□□□ 0.9
IRF1-203ENST00000437654 SETQ01105 290 aaPredicted RBP20.7■□□□□ 0.9
IRF1-203ENST00000437654 GUCY1B3Q02153 619 aa20.7■□□□□ 0.9
IRF1-203ENST00000437654 NR5A1Q13285 461 aa20.7■□□□□ 0.9
IRF1-203ENST00000437654 MTMR1Q13613 665 aa20.7■□□□□ 0.9
IRF1-203ENST00000437654 GNL2Q13823 731 aaKnown RBP20.7■□□□□ 0.9
IRF1-203ENST00000437654 NEDD9Q14511 834 aa20.7■□□□□ 0.9
IRF1-203ENST00000437654 PPP4R3AQ6IN85 833 aa20.7■□□□□ 0.9
IRF1-203ENST00000437654 PIK3AP1Q6ZUJ8 805 aa20.7■□□□□ 0.9
IRF1-203ENST00000437654 NEK8Q86SG6 692 aa20.7■□□□□ 0.9
IRF1-203ENST00000437654 ANKLE1Q8NAG6 615 aa20.7■□□□□ 0.9
IRF1-203ENST00000437654 GJA9P57773 515 aa20.69■□□□□ 0.9
IRF1-203ENST00000437654 NOSTRINQ8IVI9 506 aa20.69■□□□□ 0.9
IRF1-203ENST00000437654 EMID1Q96A84 441 aaPredicted RBP20.69■□□□□ 0.9
IRF1-203ENST00000437654 AP5M1Q9H0R1 490 aa20.69■□□□□ 0.9
IRF1-203ENST00000437654 UPF3AQ9H1J1 476 aaKnown RBP20.69■□□□□ 0.9
IRF1-203ENST00000437654 XPNPEP3Q9NQH7 507 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms