RNA–Protein interactions for RNA: ENST00000437379.2

HDAC11-213, Transcript of histone deacetylase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HDAC11, Length 2,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-213ENST00000437379 RC3H1Q5TC82 1133 aaKnown RBP16.07■□□□□ 0.16
HDAC11-213ENST00000437379 RRAGAQ7L523 313 aa16.07■□□□□ 0.16
HDAC11-213ENST00000437379 CRACR2AQ9BSW2 395 aa16.07■□□□□ 0.16
HDAC11-213ENST00000437379 SALL4Q9UJQ4 1053 aa16.07■□□□□ 0.16
HDAC11-213ENST00000437379 PCDHA13Q9Y5I0 950 aa16.07■□□□□ 0.16
HDAC11-213ENST00000437379 TARSL2A2RTX5 802 aaKnown RBP16.07■□□□□ 0.16
HDAC11-213ENST00000437379 LRRC53A6NM62 1247 aa16.07■□□□□ 0.16
HDAC11-213ENST00000437379 PDHBP11177 359 aa16.07■□□□□ 0.16
HDAC11-213ENST00000437379 MATR3P43243 847 aaKnown RBP eCLIP16.07■□□□□ 0.16
HDAC11-213ENST00000437379 KIF11P52732 1056 aa16.07■□□□□ 0.16
HDAC11-213ENST00000437379 PICALMQ13492 652 aa16.07■□□□□ 0.16
HDAC11-213ENST00000437379 UBE2SQ16763 222 aa16.07■□□□□ 0.16
HDAC11-213ENST00000437379 CDK5RAP3Q96JB5 506 aa16.07■□□□□ 0.16
HDAC11-213ENST00000437379 RPGRIP1Q96KN7 1286 aa16.07■□□□□ 0.16
HDAC11-213ENST00000437379 ZNF287Q9HBT7 754 aa16.07■□□□□ 0.16
HDAC11-213ENST00000437379 GPCPD1Q9NPB8 672 aa16.07■□□□□ 0.16
HDAC11-213ENST00000437379 GPR75-ASB3A0A0A6YYF3 556 aa16.06■□□□□ 0.16
HDAC11-213ENST00000437379 A0A1W2PQJ5 194 aa16.06■□□□□ 0.16
HDAC11-213ENST00000437379 RFC4P35249 363 aa16.06■□□□□ 0.16
HDAC11-213ENST00000437379 MFSD14BQ5SR56 506 aa16.06■□□□□ 0.16
HDAC11-213ENST00000437379 CREG2Q8IUH2 290 aa16.06■□□□□ 0.16
HDAC11-213ENST00000437379 DEF6Q9H4E7 631 aa16.06■□□□□ 0.16
HDAC11-213ENST00000437379 GGCXP38435 758 aa16.06■□□□□ 0.16
HDAC11-213ENST00000437379 MAGEA9P43362 315 aa16.06■□□□□ 0.16
HDAC11-213ENST00000437379 TNNI2P48788 182 aa16.06■□□□□ 0.16
HDAC11-213ENST00000437379 SEMA3FQ13275 785 aa16.06■□□□□ 0.16
HDAC11-213ENST00000437379 FIGNQ5HY92 759 aa16.06■□□□□ 0.16
HDAC11-213ENST00000437379 NFRKBQ6P4R8 1299 aa16.06■□□□□ 0.16
HDAC11-213ENST00000437379 UNC13DQ70J99 1090 aa16.06■□□□□ 0.16
HDAC11-213ENST00000437379 CNBD1Q8NA66 436 aa16.06■□□□□ 0.16
HDAC11-213ENST00000437379 SNX29Q8TEQ0 813 aa16.06■□□□□ 0.16
HDAC11-213ENST00000437379 DDX12PQ92771 950 aa16.06■□□□□ 0.16
HDAC11-213ENST00000437379 KANSL2Q9H9L4 492 aa16.06■□□□□ 0.16
HDAC11-213ENST00000437379 ZC3H4Q9UPT8 1303 aaKnown RBP16.06■□□□□ 0.16
HDAC11-213ENST00000437379 NCK2O43639 380 aa16.05■□□□□ 0.16
HDAC11-213ENST00000437379 APBA1Q02410 837 aa16.05■□□□□ 0.16
HDAC11-213ENST00000437379 SH2D4AQ9H788 454 aa16.05■□□□□ 0.16
HDAC11-213ENST00000437379 EFCC1Q9HA90 598 aa16.05■□□□□ 0.16
HDAC11-213ENST00000437379 SNX12Q9UMY4 172 aa16.05■□□□□ 0.16
HDAC11-213ENST00000437379 COL24A1Q17RW2 1714 aa16.05■□□□□ 0.16
HDAC11-213ENST00000437379 ANO9A1A5B4 782 aa16.05■□□□□ 0.16
HDAC11-213ENST00000437379 AKR1B10O60218 316 aa16.05■□□□□ 0.16
HDAC11-213ENST00000437379 PPFIA4O75335 1185 aa16.05■□□□□ 0.16
HDAC11-213ENST00000437379 SLURP2P0DP57 97 aa16.05■□□□□ 0.16
HDAC11-213ENST00000437379 CDK17Q00537 523 aa16.05■□□□□ 0.16
HDAC11-213ENST00000437379 SLC7A5Q01650 507 aa16.05■□□□□ 0.16
HDAC11-213ENST00000437379 GFPT1Q06210 699 aaPredicted RBP16.05■□□□□ 0.16
HDAC11-213ENST00000437379 PLCD3Q8N3E9 789 aa16.05■□□□□ 0.16
HDAC11-213ENST00000437379 SELENOOQ9BVL4 669 aa16.05■□□□□ 0.16
HDAC11-213ENST00000437379 FGFBP2Q9BYJ0 223 aa16.05■□□□□ 0.16
HDAC11-213ENST00000437379 RIOX1Q9H6W3 641 aa16.05■□□□□ 0.16
HDAC11-213ENST00000437379 TBC1D7Q9P0N9 293 aa16.05■□□□□ 0.16
HDAC11-213ENST00000437379 CCNI2Q6ZMN8 369 aaPredicted RBP16.04■□□□□ 0.16
HDAC11-213ENST00000437379 TMC4Q7Z404 712 aa16.04■□□□□ 0.16
HDAC11-213ENST00000437379 RAD54LQ92698 747 aa16.04■□□□□ 0.16
HDAC11-213ENST00000437379 LRRC1Q9BTT6 524 aa16.04■□□□□ 0.16
HDAC11-213ENST00000437379 TANGO6Q9C0B7 1094 aa16.04■□□□□ 0.16
HDAC11-213ENST00000437379 DMGDHQ9UI17 866 aaKnown RBP16.04■□□□□ 0.16
HDAC11-213ENST00000437379 MYH10P35580 1976 aa16.04■□□□□ 0.16
HDAC11-213ENST00000437379 ADCY7P51828 1080 aa16.04■□□□□ 0.16
HDAC11-213ENST00000437379 MAN2A1Q16706 1144 aa16.04■□□□□ 0.16
HDAC11-213ENST00000437379 TTC31Q49AM3 519 aaPredicted RBP16.04■□□□□ 0.16
HDAC11-213ENST00000437379 LRRC55Q6ZSA7 311 aa16.04■□□□□ 0.16
HDAC11-213ENST00000437379 IPO4Q8TEX9 1081 aaKnown RBP16.04■□□□□ 0.16
HDAC11-213ENST00000437379 C8orf37Q96NL8 207 aa16.04■□□□□ 0.16
HDAC11-213ENST00000437379 NLRC4Q9NPP4 1024 aa16.04■□□□□ 0.16
HDAC11-213ENST00000437379 JRKLQ9Y4A0 524 aa16.04■□□□□ 0.16
HDAC11-213ENST00000437379 F8W031 263 aaPredicted RBP16.04■□□□□ 0.16
HDAC11-213ENST00000437379 RGL2O15211 777 aa16.04■□□□□ 0.16
HDAC11-213ENST00000437379 BUB1O43683 1085 aa16.04■□□□□ 0.16
HDAC11-213ENST00000437379 PPP1R11O60927 126 aaPredicted RBP16.04■□□□□ 0.16
HDAC11-213ENST00000437379 AKR1B1P15121 316 aa16.04■□□□□ 0.16
HDAC11-213ENST00000437379 HNRNPH3P31942 346 aaKnown RBP16.04■□□□□ 0.16
HDAC11-213ENST00000437379 NOP2P46087 812 aaKnown RBP16.04■□□□□ 0.16
HDAC11-213ENST00000437379 NT5C2P49902 561 aa16.04■□□□□ 0.16
HDAC11-213ENST00000437379 FXR2P51116 673 aaKnown RBP eCLIP16.04■□□□□ 0.16
HDAC11-213ENST00000437379 TTBK2Q6IQ55 1244 aa16.04■□□□□ 0.16
HDAC11-213ENST00000437379 TRIM58Q8NG06 486 aa16.04■□□□□ 0.16
HDAC11-213ENST00000437379 BAP1Q92560 729 aa16.04■□□□□ 0.16
HDAC11-213ENST00000437379 CDK5RAP2Q96SN8 1893 aa16.03■□□□□ 0.16
HDAC11-213ENST00000437379 AGPSO00116 658 aa16.03■□□□□ 0.16
HDAC11-213ENST00000437379 USO1O60763 962 aaKnown RBP16.03■□□□□ 0.16
HDAC11-213ENST00000437379 SLC16A2P36021 539 aa16.03■□□□□ 0.16
HDAC11-213ENST00000437379 CORO7P57737 925 aa16.03■□□□□ 0.16
HDAC11-213ENST00000437379 CACNB1Q02641 598 aaPredicted RBP16.03■□□□□ 0.16
HDAC11-213ENST00000437379 RASSF7Q02833 373 aa16.03■□□□□ 0.16
HDAC11-213ENST00000437379 TMEM266Q2M3C6 531 aa16.03■□□□□ 0.16
HDAC11-213ENST00000437379 COBLL1Q53SF7 1204 aa16.03■□□□□ 0.16
HDAC11-213ENST00000437379 MTMR4Q9NYA4 1195 aa16.03■□□□□ 0.16
HDAC11-213ENST00000437379 PVALEFA0A1B0GWK0 134 aa16.03■□□□□ 0.16
HDAC11-213ENST00000437379 TACC1O75410 805 aa16.03■□□□□ 0.16
HDAC11-213ENST00000437379 SSBP05455 408 aaKnown RBP eCLIP16.03■□□□□ 0.16
HDAC11-213ENST00000437379 PPP1R2P41236 205 aa16.03■□□□□ 0.16
HDAC11-213ENST00000437379 IQCEQ6IPM2 695 aa16.03■□□□□ 0.16
HDAC11-213ENST00000437379 CCDC70Q6NSX1 233 aa16.03■□□□□ 0.16
HDAC11-213ENST00000437379 DPP8Q6V1X1 898 aaPredicted RBP16.03■□□□□ 0.16
HDAC11-213ENST00000437379 GUF1Q8N442 669 aaKnown RBP16.03■□□□□ 0.16
HDAC11-213ENST00000437379 RPGRQ92834 1020 aaKnown RBP16.03■□□□□ 0.16
HDAC11-213ENST00000437379 TSGA10Q9BZW7 698 aa16.03■□□□□ 0.16
HDAC11-213ENST00000437379 STK17AQ9UEE5 414 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms