RNA–Protein interactions for RNA: ENST00000437036.6

SKA2-202, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 625 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-202ENST00000437036 PLXNA1Q9UIW2 1896 aa16.78■□□□□ 0.28
SKA2-202ENST00000437036 STX6O43752 255 aa16.77■□□□□ 0.28
SKA2-202ENST00000437036 CACNB2Q08289 660 aaPredicted RBP16.77■□□□□ 0.28
SKA2-202ENST00000437036 EEPD1Q7L9B9 569 aa16.77■□□□□ 0.28
SKA2-202ENST00000437036 NOSTRINQ8IVI9 506 aa16.77■□□□□ 0.28
SKA2-202ENST00000437036 IL31RAQ8NI17 732 aa16.77■□□□□ 0.28
SKA2-202ENST00000437036 HMX1Q9NP08 348 aaPredicted RBP16.77■□□□□ 0.28
SKA2-202ENST00000437036 CYP3A4P08684 503 aa16.76■□□□□ 0.27
SKA2-202ENST00000437036 U2AF2P26368 475 aaKnown RBP eCLIP16.76■□□□□ 0.27
SKA2-202ENST00000437036 CNGA1P29973 690 aa16.76■□□□□ 0.27
SKA2-202ENST00000437036 INF2Q27J81 1249 aa16.76■□□□□ 0.27
SKA2-202ENST00000437036 PRAMEF19Q5SWL8 479 aa16.76■□□□□ 0.27
SKA2-202ENST00000437036 MAP3K21Q5TCX8 1036 aa16.76■□□□□ 0.27
SKA2-202ENST00000437036 KCNV1Q6PIU1 500 aa16.76■□□□□ 0.27
SKA2-202ENST00000437036 SEPT14Q6ZU15 432 aa16.76■□□□□ 0.27
SKA2-202ENST00000437036 NEK8Q86SG6 692 aa16.76■□□□□ 0.27
SKA2-202ENST00000437036 FBXO16Q8IX29 292 aaPredicted RBP16.76■□□□□ 0.27
SKA2-202ENST00000437036 TNFRSF25Q93038 417 aa16.76■□□□□ 0.27
SKA2-202ENST00000437036 CDHR1Q96JP9 859 aa16.76■□□□□ 0.27
SKA2-202ENST00000437036 RTEL1Q9NZ71 1219 aa16.76■□□□□ 0.27
SKA2-202ENST00000437036 FAM184BQ9ULE4 1060 aa16.76■□□□□ 0.27
SKA2-202ENST00000437036 NOL7Q9UMY1 257 aaKnown RBP16.76■□□□□ 0.27
SKA2-202ENST00000437036 CYBAP13498 195 aa16.75■□□□□ 0.27
SKA2-202ENST00000437036 MRPS9P82933 396 aaKnown RBP16.75■□□□□ 0.27
SKA2-202ENST00000437036 TRIM32Q13049 653 aa16.75■□□□□ 0.27
SKA2-202ENST00000437036 CEP55Q53EZ4 464 aa16.75■□□□□ 0.27
SKA2-202ENST00000437036 IQSEC1Q6DN90 963 aa16.75■□□□□ 0.27
SKA2-202ENST00000437036 SCFD2Q8WU76 684 aa16.75■□□□□ 0.27
SKA2-202ENST00000437036 ARMC5Q96C12 935 aa16.75■□□□□ 0.27
SKA2-202ENST00000437036 DDX49Q9Y6V7 483 aaKnown RBP16.75■□□□□ 0.27
SKA2-202ENST00000437036 MAFGO15525 162 aa16.74■□□□□ 0.27
SKA2-202ENST00000437036 MSCO60682 206 aa16.74■□□□□ 0.27
SKA2-202ENST00000437036 ZNF865P0CJ78 1059 aaPredicted RBP16.74■□□□□ 0.27
SKA2-202ENST00000437036 TGFB3P10600 412 aa16.74■□□□□ 0.27
SKA2-202ENST00000437036 AKR1A1P14550 325 aa16.74■□□□□ 0.27
SKA2-202ENST00000437036 GCFC2P16383 781 aaKnown RBP16.74■□□□□ 0.27
SKA2-202ENST00000437036 CIITAP33076 1130 aa16.74■□□□□ 0.27
SKA2-202ENST00000437036 TTLL4Q14679 1199 aa16.74■□□□□ 0.27
SKA2-202ENST00000437036 LETM2Q2VYF4 491 aa16.74■□□□□ 0.27
SKA2-202ENST00000437036 MOXD1Q6UVY6 613 aa16.74■□□□□ 0.27
SKA2-202ENST00000437036 NIPA1Q7RTP0 329 aa16.74■□□□□ 0.27
SKA2-202ENST00000437036 BRAPQ7Z569 592 aa16.74■□□□□ 0.27
SKA2-202ENST00000437036 CRYGNQ8WXF5 182 aa16.74■□□□□ 0.27
SKA2-202ENST00000437036 GPRASP2Q96D09 838 aa16.74■□□□□ 0.27
SKA2-202ENST00000437036 INPP4AQ96PE3 977 aaPredicted RBP16.74■□□□□ 0.27
SKA2-202ENST00000437036 MXRA8Q9BRK3 442 aa16.74■□□□□ 0.27
SKA2-202ENST00000437036 KATNBL1Q9H079 304 aa16.74■□□□□ 0.27
SKA2-202ENST00000437036 JADE2Q9NQC1 790 aa16.74■□□□□ 0.27
SKA2-202ENST00000437036 MTMR6Q9Y217 621 aa16.74■□□□□ 0.27
SKA2-202ENST00000437036 UBIAD1Q9Y5Z9 338 aa16.74■□□□□ 0.27
SKA2-202ENST00000437036 MRVI1Q9Y6F6 885 aa16.74■□□□□ 0.27
SKA2-202ENST00000437036 LCTP09848 1927 aa16.74■□□□□ 0.27
SKA2-202ENST00000437036 RBM47A0AV96 593 aaKnown RBP16.73■□□□□ 0.27
SKA2-202ENST00000437036 SEPT4O43236 478 aa16.73■□□□□ 0.27
SKA2-202ENST00000437036 FIBPO43427 364 aa16.73■□□□□ 0.27
SKA2-202ENST00000437036 TRAPPC10P48553 1259 aa16.73■□□□□ 0.27
SKA2-202ENST00000437036 SETQ01105 290 aaPredicted RBP16.73■□□□□ 0.27
SKA2-202ENST00000437036 MTMR1Q13613 665 aa16.73■□□□□ 0.27
SKA2-202ENST00000437036 CCDC144BQ3MJ40 725 aa16.73■□□□□ 0.27
SKA2-202ENST00000437036 TAPT1Q6NXT6 567 aa16.73■□□□□ 0.27
SKA2-202ENST00000437036 TRPV1Q8NER1 839 aa16.73■□□□□ 0.27
SKA2-202ENST00000437036 ZNF333Q96JL9 665 aa16.73■□□□□ 0.27
SKA2-202ENST00000437036 ZFP91Q96JP5 570 aaPredicted RBP16.73■□□□□ 0.27
SKA2-202ENST00000437036 WDR11Q9BZH6 1224 aa16.73■□□□□ 0.27
SKA2-202ENST00000437036 ZSCAN16Q9H4T2 348 aaPredicted RBP16.73■□□□□ 0.27
SKA2-202ENST00000437036 KIF28PB7ZC32 967 aa16.72■□□□□ 0.27
SKA2-202ENST00000437036 MEIS1O00470 390 aa16.72■□□□□ 0.27
SKA2-202ENST00000437036 NKRFO15226 690 aaKnown RBP eCLIP16.72■□□□□ 0.27
SKA2-202ENST00000437036 CCNT1O60563 726 aaKnown RBP16.72■□□□□ 0.27
SKA2-202ENST00000437036 TXNP10599 105 aaKnown RBP16.72■□□□□ 0.27
SKA2-202ENST00000437036 CCL5P13501 91 aa16.72■□□□□ 0.27
SKA2-202ENST00000437036 ITGB5P18084 799 aa16.72■□□□□ 0.27
SKA2-202ENST00000437036 CCND3P30281 292 aaPredicted RBP16.72■□□□□ 0.27
SKA2-202ENST00000437036 ICAM3P32942 547 aa16.72■□□□□ 0.27
SKA2-202ENST00000437036 ADCYAP1R1P41586 468 aa16.72■□□□□ 0.27
SKA2-202ENST00000437036 TNFAIP2Q03169 654 aa16.72■□□□□ 0.27
SKA2-202ENST00000437036 EARS2Q5JPH6 523 aaKnown RBP16.72■□□□□ 0.27
SKA2-202ENST00000437036 PPP4R3AQ6IN85 833 aa16.72■□□□□ 0.27
SKA2-202ENST00000437036 PLA2G4DQ86XP0 818 aa16.72■□□□□ 0.27
SKA2-202ENST00000437036 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.72■□□□□ 0.27
SKA2-202ENST00000437036 RNF208Q9H0X6 261 aa16.72■□□□□ 0.27
SKA2-202ENST00000437036 PDGFCQ9NRA1 345 aa16.72■□□□□ 0.27
SKA2-202ENST00000437036 CYP3A7-CYP3A51PA0A087WV96 503 aa16.71■□□□□ 0.27
SKA2-202ENST00000437036 FAM205CA6NFA0 338 aa16.71■□□□□ 0.27
SKA2-202ENST00000437036 SPATA31C2B4DYI2 1134 aa16.71■□□□□ 0.27
SKA2-202ENST00000437036 FAM86B1E9PN63 330 aa16.71■□□□□ 0.27
SKA2-202ENST00000437036 RGS20O76081 388 aa16.71■□□□□ 0.27
SKA2-202ENST00000437036 MYCP01106 439 aaPredicted RBP16.71■□□□□ 0.27
SKA2-202ENST00000437036 FAM86B2P0C5J1 330 aa16.71■□□□□ 0.27
SKA2-202ENST00000437036 ZSCAN22P10073 491 aaPredicted RBP16.71■□□□□ 0.27
SKA2-202ENST00000437036 RARBP10826 455 aa16.71■□□□□ 0.27
SKA2-202ENST00000437036 ATP2B1P20020 1258 aa16.71■□□□□ 0.27
SKA2-202ENST00000437036 CYP3A7P24462 503 aa16.71■□□□□ 0.27
SKA2-202ENST00000437036 PRR16Q569H4 304 aa16.71■□□□□ 0.27
SKA2-202ENST00000437036 RILPL1Q5EBL4 403 aa16.71■□□□□ 0.27
SKA2-202ENST00000437036 COL13A1Q5TAT6 717 aaPredicted RBP16.71■□□□□ 0.27
SKA2-202ENST00000437036 FERMT3Q86UX7 667 aa16.71■□□□□ 0.27
SKA2-202ENST00000437036 GIMAP8Q8ND71 665 aaPredicted RBP16.71■□□□□ 0.27
SKA2-202ENST00000437036 UNC93B1Q9H1C4 597 aa16.71■□□□□ 0.27
SKA2-202ENST00000437036 SPC25Q9HBM1 224 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms