RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 CCND2P30279 289 aa19.11■□□□□ 0.65
CALD1-209ENST00000436461 ARHGEF6Q15052 776 aa19.11■□□□□ 0.65
CALD1-209ENST00000436461 PRAMEF19Q5SWL8 479 aa19.11■□□□□ 0.65
CALD1-209ENST00000436461 MYSM1Q5VVJ2 828 aa19.11■□□□□ 0.65
CALD1-209ENST00000436461 PCNX4Q63HM2 1172 aa19.11■□□□□ 0.65
CALD1-209ENST00000436461 ZNF467Q7Z7K2 595 aaPredicted RBP19.11■□□□□ 0.65
CALD1-209ENST00000436461 VSIG10LQ86VR7 867 aa19.11■□□□□ 0.65
CALD1-209ENST00000436461 IWS1Q96ST2 819 aa19.11■□□□□ 0.65
CALD1-209ENST00000436461 FTOQ9C0B1 505 aaKnown RBP eCLIP19.11■□□□□ 0.652e-6■■□□□ 12.1
CALD1-209ENST00000436461 ASB14A6NK59 587 aa19.11■□□□□ 0.65
CALD1-209ENST00000436461 CCNT1O60563 726 aaKnown RBP19.11■□□□□ 0.65
CALD1-209ENST00000436461 SNAI1O95863 264 aaPredicted RBP19.11■□□□□ 0.65
CALD1-209ENST00000436461 XRCC5P13010 732 aaKnown RBP19.11■□□□□ 0.65
CALD1-209ENST00000436461 ZNF76P36508 570 aa19.11■□□□□ 0.65
CALD1-209ENST00000436461 NUCB2P80303 420 aa19.11■□□□□ 0.65
CALD1-209ENST00000436461 MAMDC4Q6UXC1 1216 aa19.11■□□□□ 0.65
CALD1-209ENST00000436461 BRAPQ7Z569 592 aa19.11■□□□□ 0.65
CALD1-209ENST00000436461 ZSCAN16Q9H4T2 348 aaPredicted RBP19.11■□□□□ 0.65
CALD1-209ENST00000436461 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.11■□□□□ 0.65
CALD1-209ENST00000436461 PCDHB6Q9Y5E3 794 aa19.11■□□□□ 0.65
CALD1-209ENST00000436461 TCHHQ07283 1943 aa19.1■□□□□ 0.65
CALD1-209ENST00000436461 DOCK5Q9H7D0 1870 aa19.1■□□□□ 0.65
CALD1-209ENST00000436461 ADCY3O60266 1144 aa19.1■□□□□ 0.65
CALD1-209ENST00000436461 RGS20O76081 388 aa19.1■□□□□ 0.65
CALD1-209ENST00000436461 PDIA4P13667 645 aaKnown RBP19.1■□□□□ 0.65
CALD1-209ENST00000436461 ITGB5P18084 799 aa19.1■□□□□ 0.65
CALD1-209ENST00000436461 STXBP2Q15833 593 aa19.1■□□□□ 0.65
CALD1-209ENST00000436461 WDR11Q9BZH6 1224 aa19.1■□□□□ 0.65
CALD1-209ENST00000436461 CHMP5Q9NZZ3 219 aa19.1■□□□□ 0.65
CALD1-209ENST00000436461 CIZ1Q9ULV3 898 aaPredicted RBP19.1■□□□□ 0.65
CALD1-209ENST00000436461 SLC37A4O43826 429 aa19.09■□□□□ 0.65
CALD1-209ENST00000436461 CYP3A4P08684 503 aa19.09■□□□□ 0.65
CALD1-209ENST00000436461 MCM7P33993 719 aa19.09■□□□□ 0.65
CALD1-209ENST00000436461 IRF5Q13568 498 aa19.09■□□□□ 0.65
CALD1-209ENST00000436461 ZNF174Q15697 407 aa19.09■□□□□ 0.65
CALD1-209ENST00000436461 TTC38Q5R3I4 469 aa19.09■□□□□ 0.65
CALD1-209ENST00000436461 OLFML2BQ68BL8 750 aa19.09■□□□□ 0.65
CALD1-209ENST00000436461 SEPT14Q6ZU15 432 aa19.09■□□□□ 0.65
CALD1-209ENST00000436461 MORC4Q8TE76 937 aa19.09■□□□□ 0.65
CALD1-209ENST00000436461 PDGFCQ9NRA1 345 aa19.09■□□□□ 0.65
CALD1-209ENST00000436461 NOL7Q9UMY1 257 aaKnown RBP19.09■□□□□ 0.65
CALD1-209ENST00000436461 IGHA2P01877 340 aa19.08■□□□□ 0.65
CALD1-209ENST00000436461 PTGS1P23219 599 aa19.08■□□□□ 0.65
CALD1-209ENST00000436461 USP11P51784 963 aa19.08■□□□□ 0.65
CALD1-209ENST00000436461 CEBPZQ03701 1054 aaKnown RBP19.08■□□□□ 0.65
CALD1-209ENST00000436461 PRR16Q569H4 304 aa19.08■□□□□ 0.65
CALD1-209ENST00000436461 TMEM63BQ5T3F8 832 aa19.08■□□□□ 0.65
CALD1-209ENST00000436461 GJA10Q969M2 543 aa19.08■□□□□ 0.65
CALD1-209ENST00000436461 MPHOSPH6Q99547 160 aaKnown RBP19.08■□□□□ 0.65
CALD1-209ENST00000436461 KATNBL1Q9H079 304 aa19.08■□□□□ 0.65
CALD1-209ENST00000436461 PKD2L1Q9P0L9 805 aa19.08■□□□□ 0.65
CALD1-209ENST00000436461 ZHX1Q9UKY1 873 aaPredicted RBP19.08■□□□□ 0.65
CALD1-209ENST00000436461 PTPN22Q9Y2R2 807 aa19.08■□□□□ 0.65
CALD1-209ENST00000436461 UBIAD1Q9Y5Z9 338 aa19.08■□□□□ 0.65
CALD1-209ENST00000436461 SYNGAP1Q96PV0 1343 aa19.08■□□□□ 0.64
CALD1-209ENST00000436461 IGLV3-22A0A075B6J6 115 aa19.07■□□□□ 0.64
CALD1-209ENST00000436461 EIF3JO75822 258 aaKnown RBP19.07■□□□□ 0.64
CALD1-209ENST00000436461 ARP10275 920 aa19.07■□□□□ 0.64
CALD1-209ENST00000436461 CEP55Q53EZ4 464 aa19.07■□□□□ 0.64
CALD1-209ENST00000436461 RILPL1Q5EBL4 403 aa19.07■□□□□ 0.64
CALD1-209ENST00000436461 POTEDQ86YR6 584 aa19.07■□□□□ 0.64
CALD1-209ENST00000436461 LENG9Q96B70 501 aa19.07■□□□□ 0.64
CALD1-209ENST00000436461 MXRA8Q9BRK3 442 aa19.07■□□□□ 0.64
CALD1-209ENST00000436461 DDX25Q9UHL0 483 aaKnown RBP19.07■□□□□ 0.64
CALD1-209ENST00000436461 MRVI1Q9Y6F6 885 aa19.07■□□□□ 0.64
CALD1-209ENST00000436461 B4DLN1 442 aa19.07■□□□□ 0.64
CALD1-209ENST00000436461 CIITAP33076 1130 aa19.07■□□□□ 0.64
CALD1-209ENST00000436461 PRMT2P55345 433 aa19.07■□□□□ 0.64
CALD1-209ENST00000436461 DNM1Q05193 864 aaKnown RBP19.07■□□□□ 0.64
CALD1-209ENST00000436461 SEMA3FQ13275 785 aa19.07■□□□□ 0.64
CALD1-209ENST00000436461 CTU1Q7Z7A3 348 aaKnown RBP19.07■□□□□ 0.64
CALD1-209ENST00000436461 PLA2G4DQ86XP0 818 aa19.07■□□□□ 0.64
CALD1-209ENST00000436461 SH3TC2Q8TF17 1288 aa19.07■□□□□ 0.64
CALD1-209ENST00000436461 USP28Q96RU2 1077 aa19.07■□□□□ 0.64
CALD1-209ENST00000436461 TFIP11Q9UBB9 837 aaKnown RBP19.07■□□□□ 0.64
CALD1-209ENST00000436461 CLIC4Q9Y696 253 aa19.07■□□□□ 0.64
CALD1-209ENST00000436461 SORBS3O60504 671 aa19.06■□□□□ 0.64
CALD1-209ENST00000436461 ACVR2BQ13705 512 aa19.06■□□□□ 0.64
CALD1-209ENST00000436461 MSL3Q8N5Y2 521 aaKnown RBP19.06■□□□□ 0.64
CALD1-209ENST00000436461 TRPV1Q8NER1 839 aa19.06■□□□□ 0.64
CALD1-209ENST00000436461 INPP4AQ96PE3 977 aaPredicted RBP19.06■□□□□ 0.64
CALD1-209ENST00000436461 TMEM60Q9H2L4 133 aa19.06■□□□□ 0.64
CALD1-209ENST00000436461 JADE2Q9NQC1 790 aa19.06■□□□□ 0.64
CALD1-209ENST00000436461 CYP3A7-CYP3A51PA0A087WV96 503 aa19.05■□□□□ 0.64
CALD1-209ENST00000436461 LOC102724159A0A0B4J2E5 919 aa19.05■□□□□ 0.64
CALD1-209ENST00000436461 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.05■□□□□ 0.64
CALD1-209ENST00000436461 MEIS1O00470 390 aa19.05■□□□□ 0.64
CALD1-209ENST00000436461 ARIH2O95376 493 aa19.05■□□□□ 0.64
CALD1-209ENST00000436461 CYP3A7P24462 503 aa19.05■□□□□ 0.64
CALD1-209ENST00000436461 GRK4P32298 578 aa19.05■□□□□ 0.64
CALD1-209ENST00000436461 ADCYAP1R1P41586 468 aa19.05■□□□□ 0.64
CALD1-209ENST00000436461 TRAPPC10P48553 1259 aa19.05■□□□□ 0.64
CALD1-209ENST00000436461 CACNB2Q08289 660 aaPredicted RBP19.05■□□□□ 0.64
CALD1-209ENST00000436461 MTMR1Q13613 665 aa19.05■□□□□ 0.64
CALD1-209ENST00000436461 PWP2Q15269 919 aaKnown RBP19.05■□□□□ 0.64
CALD1-209ENST00000436461 SF3A1Q15459 793 aaKnown RBP19.05■□□□□ 0.64
CALD1-209ENST00000436461 MFSD14CQ5VZR4 134 aa19.05■□□□□ 0.64
CALD1-209ENST00000436461 PPP4R3AQ6IN85 833 aa19.05■□□□□ 0.64
CALD1-209ENST00000436461 TAPT1Q6NXT6 567 aa19.05■□□□□ 0.64
CALD1-209ENST00000436461 XRRA1Q6P2D8 792 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms