RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 LRIT3Q3SXY7 679 aa21.14■□□□□ 0.97
HMGN1-207ENST00000436324 APOA5Q6Q788 366 aa21.14■□□□□ 0.97
HMGN1-207ENST00000436324 AFG1LQ8WV93 481 aa21.14■□□□□ 0.97
HMGN1-207ENST00000436324 MTG1Q9BT17 334 aaPredicted RBP21.14■□□□□ 0.97
HMGN1-207ENST00000436324 PPP1R12CQ9BZL4 782 aa21.14■□□□□ 0.97
HMGN1-207ENST00000436324 TRPV6Q9H1D0 765 aa21.14■□□□□ 0.97
HMGN1-207ENST00000436324 SNX14Q9Y5W7 946 aa21.14■□□□□ 0.97
HMGN1-207ENST00000436324 A6NJR5 290 aa21.13■□□□□ 0.97
HMGN1-207ENST00000436324 SORBS3O60504 671 aa21.13■□□□□ 0.97
HMGN1-207ENST00000436324 REC8O95072 547 aa21.13■□□□□ 0.97
HMGN1-207ENST00000436324 CD4P01730 458 aa21.13■□□□□ 0.97
HMGN1-207ENST00000436324 CENPBP07199 599 aaPredicted RBP21.13■□□□□ 0.97
HMGN1-207ENST00000436324 CCND2P30279 289 aa21.13■□□□□ 0.97
HMGN1-207ENST00000436324 HSPA4P34932 840 aa21.13■□□□□ 0.97
HMGN1-207ENST00000436324 EPHB4P54760 987 aa21.13■□□□□ 0.97
HMGN1-207ENST00000436324 FPGSQ05932 587 aa21.13■□□□□ 0.97
HMGN1-207ENST00000436324 USP17L6PQ6QN14 398 aa21.13■□□□□ 0.97
HMGN1-207ENST00000436324 SMARCC2Q8TAQ2 1214 aa21.13■□□□□ 0.97
HMGN1-207ENST00000436324 KCNB2Q92953 911 aa21.13■□□□□ 0.97
HMGN1-207ENST00000436324 DDX41Q9UJV9 622 aaKnown RBP21.13■□□□□ 0.97
HMGN1-207ENST00000436324 KLF18A0A0U1RQI7 1052 aa21.12■□□□□ 0.97
HMGN1-207ENST00000436324 ZBTB43O43298 467 aa21.12■□□□□ 0.97
HMGN1-207ENST00000436324 HMGB1P09429 215 aaKnown RBP21.12■□□□□ 0.97
HMGN1-207ENST00000436324 ARHGAP1Q07960 439 aa21.12■□□□□ 0.97
HMGN1-207ENST00000436324 RTN1Q16799 776 aa21.12■□□□□ 0.97
HMGN1-207ENST00000436324 FAM47CQ5HY64 1035 aa21.12■□□□□ 0.97
HMGN1-207ENST00000436324 VSIG10LQ86VR7 867 aa21.12■□□□□ 0.97
HMGN1-207ENST00000436324 CUL5Q93034 780 aa21.12■□□□□ 0.97
HMGN1-207ENST00000436324 GOLGA8AA7E2F4 631 aa21.11■□□□□ 0.97
HMGN1-207ENST00000436324 GOLGA8BA8MQT2 603 aa21.11■□□□□ 0.97
HMGN1-207ENST00000436324 B4GALT4O60513 344 aa21.11■□□□□ 0.97
HMGN1-207ENST00000436324 RGS20O76081 388 aa21.11■□□□□ 0.97
HMGN1-207ENST00000436324 CYP2C18P33260 490 aa21.11■□□□□ 0.97
HMGN1-207ENST00000436324 NBPF20Q3BBV1 942 aa21.11■□□□□ 0.97
HMGN1-207ENST00000436324 PPP4R3CPQ6ZMV5 832 aa21.11■□□□□ 0.97
HMGN1-207ENST00000436324 HEATR3Q7Z4Q2 680 aa21.11■□□□□ 0.97
HMGN1-207ENST00000436324 RBM28Q9NW13 759 aaKnown RBP21.11■□□□□ 0.97
HMGN1-207ENST00000436324 KPNA6O60684 536 aa21.1■□□□□ 0.97
HMGN1-207ENST00000436324 MMP3P08254 477 aa21.1■□□□□ 0.97
HMGN1-207ENST00000436324 APOBRQ0VD83 1088 aa21.1■□□□□ 0.97
HMGN1-207ENST00000436324 MFSD5Q6N075 450 aa21.1■□□□□ 0.97
HMGN1-207ENST00000436324 BLOC1S2Q6QNY1 142 aa21.1■□□□□ 0.97
HMGN1-207ENST00000436324 Q6ZUG5 572 aa21.1■□□□□ 0.97
HMGN1-207ENST00000436324 DHX37Q8IY37 1157 aaKnown RBP21.1■□□□□ 0.97
HMGN1-207ENST00000436324 GPKOWQ92917 476 aaPredicted RBP eCLIP21.1■□□□□ 0.972e-6■■■■□ 20.4
HMGN1-207ENST00000436324 SEZ6LQ9BYH1 1024 aa21.1■□□□□ 0.97
HMGN1-207ENST00000436324 ALDH8A1Q9H2A2 487 aaPredicted RBP21.1■□□□□ 0.97
HMGN1-207ENST00000436324 RTEL1Q9NZ71 1219 aa21.1■□□□□ 0.97
HMGN1-207ENST00000436324 MEIS2O14770 477 aa21.09■□□□□ 0.97
HMGN1-207ENST00000436324 ERICH6BQ5W0A0 696 aa21.09■□□□□ 0.97
HMGN1-207ENST00000436324 HIPK3Q9H422 1215 aa21.09■□□□□ 0.97
HMGN1-207ENST00000436324 PSTPIP2Q9H939 334 aa21.09■□□□□ 0.97
HMGN1-207ENST00000436324 TRMT13Q9NUP7 481 aaKnown RBP21.09■□□□□ 0.97
HMGN1-207ENST00000436324 DNAH12Q6ZR08 3092 aa21.08■□□□□ 0.97
HMGN1-207ENST00000436324 UMODL1Q5DID0 1318 aa21.08■□□□□ 0.97
HMGN1-207ENST00000436324 CNTNAP5Q8WYK1 1306 aa21.08■□□□□ 0.97
HMGN1-207ENST00000436324 CSF2RAP15509 400 aa21.08■□□□□ 0.97
HMGN1-207ENST00000436324 RANBP2P49792 3224 aaKnown RBP21.08■□□□□ 0.97
HMGN1-207ENST00000436324 LAMC2Q13753 1193 aa21.08■□□□□ 0.97
HMGN1-207ENST00000436324 UBE2SQ16763 222 aa21.08■□□□□ 0.97
HMGN1-207ENST00000436324 Q7L0L9 218 aa21.08■□□□□ 0.97
HMGN1-207ENST00000436324 TMEM199Q8N511 208 aa21.08■□□□□ 0.97
HMGN1-207ENST00000436324 BRF1Q92994 677 aa21.08■□□□□ 0.97
HMGN1-207ENST00000436324 RNPC3Q96LT9 517 aaKnown RBP21.08■□□□□ 0.97
HMGN1-207ENST00000436324 V9GY48 417 aaPredicted RBP21.08■□□□□ 0.97
HMGN1-207ENST00000436324 GGPS1O95749 300 aa21.07■□□□□ 0.96
HMGN1-207ENST00000436324 ACRP10323 421 aa21.07■□□□□ 0.96
HMGN1-207ENST00000436324 CYP2C9P11712 490 aa21.07■□□□□ 0.96
HMGN1-207ENST00000436324 CASTP20810 708 aaKnown RBP21.07■□□□□ 0.96
HMGN1-207ENST00000436324 RPS6KB1P23443 525 aa21.07■□□□□ 0.96
HMGN1-207ENST00000436324 CDC27P30260 824 aa21.07■□□□□ 0.96
HMGN1-207ENST00000436324 CCL23P55773 120 aa21.07■□□□□ 0.96
HMGN1-207ENST00000436324 MRPS9P82933 396 aaKnown RBP21.07■□□□□ 0.96
HMGN1-207ENST00000436324 SP2Q02086 613 aa21.07■□□□□ 0.96
HMGN1-207ENST00000436324 PPIGQ13427 754 aaKnown RBP eCLIP21.07■□□□□ 0.965e-19■■□□□ 12
HMGN1-207ENST00000436324 KCNV1Q6PIU1 500 aa21.07■□□□□ 0.96
HMGN1-207ENST00000436324 FAM217BQ9NTX9 383 aaPredicted RBP21.07■□□□□ 0.96
HMGN1-207ENST00000436324 PIK3CDO00329 1044 aa21.06■□□□□ 0.96
HMGN1-207ENST00000436324 UBA1P22314 1058 aaKnown RBP21.06■□□□□ 0.96
HMGN1-207ENST00000436324 PSMA5P28066 241 aa21.06■□□□□ 0.96
HMGN1-207ENST00000436324 ADD1P35611 737 aaKnown RBP21.06■□□□□ 0.96
HMGN1-207ENST00000436324 METAP2P50579 478 aaKnown RBP eCLIP21.06■□□□□ 0.96
HMGN1-207ENST00000436324 FUT2Q10981 343 aa21.06■□□□□ 0.96
HMGN1-207ENST00000436324 DGKDQ16760 1214 aa21.06■□□□□ 0.96
HMGN1-207ENST00000436324 CELF3Q5SZQ8 465 aaKnown RBP21.06■□□□□ 0.96
HMGN1-207ENST00000436324 WWC2Q6AWC2 1192 aa21.06■□□□□ 0.96
HMGN1-207ENST00000436324 SPATA33Q96N06 139 aa21.06■□□□□ 0.96
HMGN1-207ENST00000436324 NOC4LQ9BVI4 516 aaKnown RBP21.06■□□□□ 0.96
HMGN1-207ENST00000436324 FRMPD4Q14CM0 1322 aa21.05■□□□□ 0.96
HMGN1-207ENST00000436324 SUPT20HL2P0C7V6 817 aa21.05■□□□□ 0.96
HMGN1-207ENST00000436324 ZNF286BP0CG31 522 aa21.05■□□□□ 0.96
HMGN1-207ENST00000436324 GNPTABQ3T906 1256 aa21.05■□□□□ 0.96
HMGN1-207ENST00000436324 MYSM1Q5VVJ2 828 aa21.05■□□□□ 0.96
HMGN1-207ENST00000436324 NFRKBQ6P4R8 1299 aa21.05■□□□□ 0.96
HMGN1-207ENST00000436324 DEFB123Q8N688 67 aa21.05■□□□□ 0.96
HMGN1-207ENST00000436324 PPTC7Q8NI37 304 aa21.05■□□□□ 0.96
HMGN1-207ENST00000436324 KAT2BQ92831 832 aa21.05■□□□□ 0.96
HMGN1-207ENST00000436324 EMID1Q96A84 441 aaPredicted RBP21.05■□□□□ 0.96
HMGN1-207ENST00000436324 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.05■□□□□ 0.964e-7■■■□□ 15.1
HMGN1-207ENST00000436324 ALG1Q9BT22 464 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms