RNA–Protein interactions for RNA: ENST00000436216.1

EXT1-202, Transcript of exostosin glycosyltransferase 1, humanhuman

TSL 3

Gene EXT1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-202ENST00000436216 PCDH10Q9P2E7 1040 aa14.3□□□□□ -0.12
EXT1-202ENST00000436216 DDX41Q9UJV9 622 aaKnown RBP14.3□□□□□ -0.12
EXT1-202ENST00000436216 CNTNAP5Q8WYK1 1306 aa14.3□□□□□ -0.12
EXT1-202ENST00000436216 NID2Q14112 1375 aa14.3□□□□□ -0.12
EXT1-202ENST00000436216 LTBP2Q14767 1821 aa14.29□□□□□ -0.12
EXT1-202ENST00000436216 hCG_1642624A0A1W2PR95 340 aa14.29□□□□□ -0.12
EXT1-202ENST00000436216 KPNA6O60684 536 aa14.29□□□□□ -0.12
EXT1-202ENST00000436216 SLC34A2O95436 690 aa14.29□□□□□ -0.12
EXT1-202ENST00000436216 CD4P01730 458 aa14.29□□□□□ -0.12
EXT1-202ENST00000436216 ITGB8P26012 769 aa14.29□□□□□ -0.12
EXT1-202ENST00000436216 MDM2Q00987 491 aaPredicted RBP14.29□□□□□ -0.12
EXT1-202ENST00000436216 ARHGAP1Q07960 439 aa14.29□□□□□ -0.12
EXT1-202ENST00000436216 APOBRQ0VD83 1088 aa14.29□□□□□ -0.12
EXT1-202ENST00000436216 ITGA7Q13683 1181 aa14.29□□□□□ -0.12
EXT1-202ENST00000436216 LY6KQ17RY6 165 aa14.29□□□□□ -0.12
EXT1-202ENST00000436216 USP17L6PQ6QN14 398 aa14.29□□□□□ -0.12
EXT1-202ENST00000436216 RUFY3Q7L099 469 aa14.29□□□□□ -0.12
EXT1-202ENST00000436216 FCHSD1Q86WN1 690 aa14.29□□□□□ -0.12
EXT1-202ENST00000436216 FAM126BQ8IXS8 530 aa14.29□□□□□ -0.12
EXT1-202ENST00000436216 BRF1Q92994 677 aa14.29□□□□□ -0.12
EXT1-202ENST00000436216 EMID1Q96A84 441 aaPredicted RBP14.29□□□□□ -0.12
EXT1-202ENST00000436216 VTI1AQ96AJ9 217 aa14.29□□□□□ -0.12
EXT1-202ENST00000436216 LBHD1Q9BQE6 289 aaPredicted RBP14.29□□□□□ -0.12
EXT1-202ENST00000436216 POLR3EQ9NVU0 708 aa14.29□□□□□ -0.12
EXT1-202ENST00000436216 TBX21Q9UL17 535 aa14.29□□□□□ -0.12
EXT1-202ENST00000436216 GOLGA8AA7E2F4 631 aa14.28□□□□□ -0.12
EXT1-202ENST00000436216 GOLGA8BA8MQT2 603 aa14.28□□□□□ -0.12
EXT1-202ENST00000436216 STAM2O75886 525 aa14.28□□□□□ -0.12
EXT1-202ENST00000436216 GH1P01241 217 aa14.28□□□□□ -0.12
EXT1-202ENST00000436216 TGFB3P10600 412 aa14.28□□□□□ -0.12
EXT1-202ENST00000436216 MYCLP12524 364 aaPredicted RBP14.28□□□□□ -0.12
EXT1-202ENST00000436216 CASTP20810 708 aaKnown RBP14.28□□□□□ -0.12
EXT1-202ENST00000436216 CCND2P30279 289 aa14.28□□□□□ -0.12
EXT1-202ENST00000436216 MRPS9P82933 396 aaKnown RBP14.28□□□□□ -0.12
EXT1-202ENST00000436216 FGD1P98174 961 aa14.28□□□□□ -0.12
EXT1-202ENST00000436216 BRDTQ58F21 947 aaPredicted RBP14.28□□□□□ -0.12
EXT1-202ENST00000436216 KCNV1Q6PIU1 500 aa14.28□□□□□ -0.12
EXT1-202ENST00000436216 TEX2Q8IWB9 1127 aa14.28□□□□□ -0.12
EXT1-202ENST00000436216 TDHQ8IZJ6 230 aa14.28□□□□□ -0.12
EXT1-202ENST00000436216 UBE2OQ9C0C9 1292 aaKnown RBP14.28□□□□□ -0.12
EXT1-202ENST00000436216 PSTPIP2Q9H939 334 aa14.28□□□□□ -0.12
EXT1-202ENST00000436216 PRDM5Q9NQX1 630 aaPredicted RBP14.28□□□□□ -0.12
EXT1-202ENST00000436216 TMEM39AQ9NV64 488 aa14.28□□□□□ -0.12
EXT1-202ENST00000436216 V9GY48 417 aaPredicted RBP14.28□□□□□ -0.12
EXT1-202ENST00000436216 CCDC196A0A1B0GTZ2 297 aa14.27□□□□□ -0.13
EXT1-202ENST00000436216 ICAM3P32942 547 aa14.27□□□□□ -0.13
EXT1-202ENST00000436216 ADD1P35611 737 aaKnown RBP14.27□□□□□ -0.13
EXT1-202ENST00000436216 WWC2Q6AWC2 1192 aa14.27□□□□□ -0.13
EXT1-202ENST00000436216 XRRA1Q6P2D8 792 aa14.27□□□□□ -0.13
EXT1-202ENST00000436216 SMARCC2Q8TAQ2 1214 aa14.27□□□□□ -0.13
EXT1-202ENST00000436216 AFG1LQ8WV93 481 aa14.27□□□□□ -0.13
EXT1-202ENST00000436216 BADQ92934 168 aa14.27□□□□□ -0.13
EXT1-202ENST00000436216 CUL5Q93034 780 aa14.27□□□□□ -0.13
EXT1-202ENST00000436216 INPP4AQ96PE3 977 aaPredicted RBP14.27□□□□□ -0.13
EXT1-202ENST00000436216 MTG1Q9BT17 334 aaPredicted RBP14.27□□□□□ -0.13
EXT1-202ENST00000436216 MRVI1Q9Y6F6 885 aa14.27□□□□□ -0.13
EXT1-202ENST00000436216 SCN10AQ9Y5Y9 1956 aa14.27□□□□□ -0.13
EXT1-202ENST00000436216 hCG_1984214I3L0E3 225 aa14.26□□□□□ -0.13
EXT1-202ENST00000436216 TIMP1P01033 207 aa14.26□□□□□ -0.13
EXT1-202ENST00000436216 MYL3P08590 195 aa14.26□□□□□ -0.13
EXT1-202ENST00000436216 HOXD8P13378 290 aaPredicted RBP14.26□□□□□ -0.13
EXT1-202ENST00000436216 METAP2P50579 478 aaKnown RBP eCLIP14.26□□□□□ -0.13
EXT1-202ENST00000436216 PSMC6P62333 389 aa14.26□□□□□ -0.13
EXT1-202ENST00000436216 SP2Q02086 613 aa14.26□□□□□ -0.13
EXT1-202ENST00000436216 LAMC2Q13753 1193 aa14.26□□□□□ -0.13
EXT1-202ENST00000436216 TOB2Q14106 344 aaPredicted RBP14.26□□□□□ -0.13
EXT1-202ENST00000436216 NTRK3Q16288 839 aa14.26□□□□□ -0.13
EXT1-202ENST00000436216 LRIT3Q3SXY7 679 aa14.26□□□□□ -0.13
EXT1-202ENST00000436216 PCNX4Q63HM2 1172 aa14.26□□□□□ -0.13
EXT1-202ENST00000436216 TYW1BQ6NUM6 668 aa14.26□□□□□ -0.13
EXT1-202ENST00000436216 PPP1R18Q6NYC8 613 aa14.26□□□□□ -0.13
EXT1-202ENST00000436216 HEATR3Q7Z4Q2 680 aa14.26□□□□□ -0.13
EXT1-202ENST00000436216 ZNF713Q8N859 430 aaPredicted RBP14.26□□□□□ -0.13
EXT1-202ENST00000436216 IL17RAQ96F46 866 aa14.26□□□□□ -0.13
EXT1-202ENST00000436216 CYP46A1Q9Y6A2 500 aa14.26□□□□□ -0.13
EXT1-202ENST00000436216 SPATA31C2B4DYI2 1134 aa14.25□□□□□ -0.13
EXT1-202ENST00000436216 STXBP3O00186 592 aa14.25□□□□□ -0.13
EXT1-202ENST00000436216 TLR3O15455 904 aaKnown RBP14.25□□□□□ -0.13
EXT1-202ENST00000436216 MMP3P08254 477 aa14.25□□□□□ -0.13
EXT1-202ENST00000436216 RAG1P15918 1043 aa14.25□□□□□ -0.13
EXT1-202ENST00000436216 PDIA3P30101 505 aaKnown RBP14.25□□□□□ -0.13
EXT1-202ENST00000436216 CELF3Q5SZQ8 465 aaKnown RBP14.25□□□□□ -0.13
EXT1-202ENST00000436216 MYSM1Q5VVJ2 828 aa14.25□□□□□ -0.13
EXT1-202ENST00000436216 DHX37Q8IY37 1157 aaKnown RBP14.25□□□□□ -0.13
EXT1-202ENST00000436216 PPTC7Q8NI37 304 aa14.25□□□□□ -0.13
EXT1-202ENST00000436216 GPKOWQ92917 476 aaPredicted RBP eCLIP14.25□□□□□ -0.13
EXT1-202ENST00000436216 ALDH8A1Q9H2A2 487 aaPredicted RBP14.25□□□□□ -0.13
EXT1-202ENST00000436216 BARHL2Q9NY43 387 aa14.25□□□□□ -0.13
EXT1-202ENST00000436216 PRPF3O43395 683 aaKnown RBP14.24□□□□□ -0.13
EXT1-202ENST00000436216 UBA1P22314 1058 aaKnown RBP14.24□□□□□ -0.13
EXT1-202ENST00000436216 ANAPC15P60006 121 aa14.24□□□□□ -0.13
EXT1-202ENST00000436216 SEMA3FQ13275 785 aa14.24□□□□□ -0.13
EXT1-202ENST00000436216 UBE2SQ16763 222 aa14.24□□□□□ -0.13
EXT1-202ENST00000436216 PFKFB3Q16875 520 aaPredicted RBP14.24□□□□□ -0.13
EXT1-202ENST00000436216 NBPF20Q3BBV1 942 aa14.24□□□□□ -0.13
EXT1-202ENST00000436216 GNPTABQ3T906 1256 aa14.24□□□□□ -0.13
EXT1-202ENST00000436216 NFRKBQ6P4R8 1299 aa14.24□□□□□ -0.13
EXT1-202ENST00000436216 KAT2BQ92831 832 aa14.24□□□□□ -0.13
EXT1-202ENST00000436216 ZNF274Q96GC6 653 aaPredicted RBP14.24□□□□□ -0.13
EXT1-202ENST00000436216 ZFP91Q96JP5 570 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms