RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 SNX29Q8TEQ0 813 aa11.58□□□□□ -0.56
CLSTN1-203ENST00000435891 TUBB2BQ9BVA1 445 aa11.58□□□□□ -0.56
CLSTN1-203ENST00000435891 FGFBP2Q9BYJ0 223 aa11.58□□□□□ -0.56
CLSTN1-203ENST00000435891 ARHGAP20Q9P2F6 1191 aa11.58□□□□□ -0.56
CLSTN1-203ENST00000435891 ZMYND10O75800 440 aa11.57□□□□□ -0.56
CLSTN1-203ENST00000435891 SNHG28P0DPA3 235 aa11.57□□□□□ -0.56
CLSTN1-203ENST00000435891 SMARCA1P28370 1054 aa11.57□□□□□ -0.56
CLSTN1-203ENST00000435891 AMPD3Q01432 767 aa11.57□□□□□ -0.56
CLSTN1-203ENST00000435891 KCTD1Q719H9 257 aa11.57□□□□□ -0.56
CLSTN1-203ENST00000435891 DDX12PQ92771 950 aa11.57□□□□□ -0.56
CLSTN1-203ENST00000435891 CCDC47Q96A33 483 aaKnown RBP11.57□□□□□ -0.56
CLSTN1-203ENST00000435891 RBM17Q96I25 401 aaKnown RBP11.57□□□□□ -0.56
CLSTN1-203ENST00000435891 SIK3Q9Y2K2 1263 aa11.57□□□□□ -0.56
CLSTN1-203ENST00000435891 SAR1BQ9Y6B6 198 aa11.57□□□□□ -0.56
CLSTN1-203ENST00000435891 IGKV6D-41A0A0C4DH26 115 aa11.57□□□□□ -0.56
CLSTN1-203ENST00000435891 PSEN1P49768 467 aa11.57□□□□□ -0.56
CLSTN1-203ENST00000435891 FXR2P51116 673 aaKnown RBP eCLIP11.57□□□□□ -0.56
CLSTN1-203ENST00000435891 UNC13DQ70J99 1090 aa11.57□□□□□ -0.56
CLSTN1-203ENST00000435891 HAS1Q92839 578 aa11.57□□□□□ -0.56
CLSTN1-203ENST00000435891 NDST4Q9H3R1 872 aa11.57□□□□□ -0.56
CLSTN1-203ENST00000435891 LRRIQ3A6PVS8 624 aaPredicted RBP11.57□□□□□ -0.56
CLSTN1-203ENST00000435891 EIF3CLB5ME19 914 aaKnown RBP11.57□□□□□ -0.56
CLSTN1-203ENST00000435891 PAPD7Q5XG87 772 aaKnown RBP11.57□□□□□ -0.56
CLSTN1-203ENST00000435891 EIF3CQ99613 913 aaKnown RBP11.57□□□□□ -0.56
CLSTN1-203ENST00000435891 FAM196BA6NMK8 535 aa11.56□□□□□ -0.56
CLSTN1-203ENST00000435891 USP17L10C9JJH3 530 aa11.56□□□□□ -0.56
CLSTN1-203ENST00000435891 IBSPP21815 317 aaPredicted RBP11.56□□□□□ -0.56
CLSTN1-203ENST00000435891 GUCY2CP25092 1073 aa11.56□□□□□ -0.56
CLSTN1-203ENST00000435891 CYLC1P35663 651 aaPredicted RBP11.56□□□□□ -0.56
CLSTN1-203ENST00000435891 KRT83P78385 493 aa11.56□□□□□ -0.56
CLSTN1-203ENST00000435891 CASP8Q14790 479 aa11.56□□□□□ -0.56
CLSTN1-203ENST00000435891 VWA3BQ502W6 1294 aa11.56□□□□□ -0.56
CLSTN1-203ENST00000435891 C2CD5Q86YS7 1000 aa11.56□□□□□ -0.56
CLSTN1-203ENST00000435891 ZFPM1Q8IX07 1006 aa11.56□□□□□ -0.56
CLSTN1-203ENST00000435891 RAD54LQ92698 747 aa11.56□□□□□ -0.56
CLSTN1-203ENST00000435891 CDK5RAP3Q96JB5 506 aa11.56□□□□□ -0.56
CLSTN1-203ENST00000435891 NUP58Q9BVL2 599 aa11.56□□□□□ -0.56
CLSTN1-203ENST00000435891 KANSL2Q9H9L4 492 aa11.56□□□□□ -0.56
CLSTN1-203ENST00000435891 ADAM21Q9UKJ8 722 aa11.56□□□□□ -0.56
CLSTN1-203ENST00000435891 PCDHAC2Q9Y5I4 1007 aa11.56□□□□□ -0.56
CLSTN1-203ENST00000435891 CAPN6Q9Y6Q1 641 aa11.56□□□□□ -0.56
CLSTN1-203ENST00000435891 THSD7AQ9UPZ6 1657 aa11.56□□□□□ -0.56
CLSTN1-203ENST00000435891 KRT86O43790 486 aa11.56□□□□□ -0.56
CLSTN1-203ENST00000435891 SHMT1P34896 483 aa11.56□□□□□ -0.56
CLSTN1-203ENST00000435891 ZNF543Q08ER8 600 aa11.56□□□□□ -0.56
CLSTN1-203ENST00000435891 NFIAQ12857 509 aa11.56□□□□□ -0.56
CLSTN1-203ENST00000435891 SEMA3FQ13275 785 aa11.56□□□□□ -0.56
CLSTN1-203ENST00000435891 LRRC55Q6ZSA7 311 aa11.56□□□□□ -0.56
CLSTN1-203ENST00000435891 FAM114A1Q8IWE2 563 aa11.56□□□□□ -0.56
CLSTN1-203ENST00000435891 GDAP1L1Q96MZ0 367 aa11.56□□□□□ -0.56
CLSTN1-203ENST00000435891 MMRN2Q9H8L6 949 aa11.56□□□□□ -0.56
CLSTN1-203ENST00000435891 MLXIPQ9HAP2 919 aa11.56□□□□□ -0.56
CLSTN1-203ENST00000435891 ZNHIT6Q9NWK9 470 aaKnown RBP11.56□□□□□ -0.56
CLSTN1-203ENST00000435891 BBOX1O75936 387 aa11.56□□□□□ -0.56
CLSTN1-203ENST00000435891 MNAT1P51948 309 aa11.56□□□□□ -0.56
CLSTN1-203ENST00000435891 CACNB1Q02641 598 aaPredicted RBP11.56□□□□□ -0.56
CLSTN1-203ENST00000435891 DOK7Q18PE1 504 aa11.56□□□□□ -0.56
CLSTN1-203ENST00000435891 ASPRV1Q53RT3 343 aa11.56□□□□□ -0.56
CLSTN1-203ENST00000435891 HDXQ7Z353 690 aa11.56□□□□□ -0.56
CLSTN1-203ENST00000435891 GSPT2Q8IYD1 628 aaKnown RBP11.56□□□□□ -0.56
CLSTN1-203ENST00000435891 RETREG2Q8NC44 543 aa11.56□□□□□ -0.56
CLSTN1-203ENST00000435891 ZNF526Q8TF50 670 aaPredicted RBP11.56□□□□□ -0.56
CLSTN1-203ENST00000435891 TBC1D7Q9P0N9 293 aa11.56□□□□□ -0.56
CLSTN1-203ENST00000435891 PLIN4Q96Q06 1357 aa11.55□□□□□ -0.56
CLSTN1-203ENST00000435891 POTEB2H3BUK9 544 aa11.55□□□□□ -0.56
CLSTN1-203ENST00000435891 APBA1Q02410 837 aa11.55□□□□□ -0.56
CLSTN1-203ENST00000435891 EHHADHQ08426 723 aa11.55□□□□□ -0.56
CLSTN1-203ENST00000435891 COBLL1Q53SF7 1204 aa11.55□□□□□ -0.56
CLSTN1-203ENST00000435891 TBC1D22AQ8WUA7 517 aa11.55□□□□□ -0.56
CLSTN1-203ENST00000435891 PURBQ96QR8 312 aaKnown RBP11.55□□□□□ -0.56
CLSTN1-203ENST00000435891 PLAGL2Q9UPG8 496 aa11.55□□□□□ -0.56
CLSTN1-203ENST00000435891 CEP83Q9Y592 693 aa11.55□□□□□ -0.56
CLSTN1-203ENST00000435891 ADAMTSL1Q8N6G6 1762 aa11.55□□□□□ -0.56
CLSTN1-203ENST00000435891 MYH10P35580 1976 aa11.55□□□□□ -0.56
CLSTN1-203ENST00000435891 USP17L15C9J2P7 530 aa11.55□□□□□ -0.56
CLSTN1-203ENST00000435891 USP17L13C9JLJ4 530 aa11.55□□□□□ -0.56
CLSTN1-203ENST00000435891 USP17L11C9JVI0 530 aa11.55□□□□□ -0.56
CLSTN1-203ENST00000435891 USP17L18D6R9N7 530 aa11.55□□□□□ -0.56
CLSTN1-203ENST00000435891 USP17L22D6RA61 530 aa11.55□□□□□ -0.56
CLSTN1-203ENST00000435891 USP17L17D6RBQ6 530 aa11.55□□□□□ -0.56
CLSTN1-203ENST00000435891 USP17L19D6RCP7 530 aa11.55□□□□□ -0.56
CLSTN1-203ENST00000435891 USP17L20D6RJB6 530 aa11.55□□□□□ -0.56
CLSTN1-203ENST00000435891 PHACTR2O75167 634 aa11.55□□□□□ -0.56
CLSTN1-203ENST00000435891 MYBL2P10244 700 aa11.55□□□□□ -0.56
CLSTN1-203ENST00000435891 USP17L24Q0WX57 530 aa11.55□□□□□ -0.56
CLSTN1-203ENST00000435891 FKBP15Q5T1M5 1219 aa11.55□□□□□ -0.56
CLSTN1-203ENST00000435891 USP17L6PQ6QN14 398 aa11.55□□□□□ -0.56
CLSTN1-203ENST00000435891 CCDC170Q8IYT3 715 aa11.55□□□□□ -0.56
CLSTN1-203ENST00000435891 DNAJC19Q96DA6 116 aa11.55□□□□□ -0.56
CLSTN1-203ENST00000435891 CCDC42Q96M95 316 aa11.55□□□□□ -0.56
CLSTN1-203ENST00000435891 STK17AQ9UEE5 414 aa11.55□□□□□ -0.56
CLSTN1-203ENST00000435891 SERPINB13Q9UIV8 391 aa11.55□□□□□ -0.56
CLSTN1-203ENST00000435891 SALL4Q9UJQ4 1053 aa11.55□□□□□ -0.56
CLSTN1-203ENST00000435891 MYH7BA7E2Y1 1941 aa11.55□□□□□ -0.56
CLSTN1-203ENST00000435891 NPHP3-ACAD11A0A0J9YXS1 232 aa11.55□□□□□ -0.56
CLSTN1-203ENST00000435891 LRRC53A6NM62 1247 aa11.55□□□□□ -0.56
CLSTN1-203ENST00000435891 TTLL1O95922 423 aa11.55□□□□□ -0.56
CLSTN1-203ENST00000435891 CCDC172P0C7W6 258 aa11.55□□□□□ -0.56
CLSTN1-203ENST00000435891 HOXA10P31260 410 aaPredicted RBP11.55□□□□□ -0.56
CLSTN1-203ENST00000435891 EIF4A3P38919 411 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 152 ms