RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 ABCB11O95342 1321 aa18.65■□□□□ 0.58
LIMK1-203ENST00000435201 SPDYE2BA6NHP3 402 aa18.65■□□□□ 0.58
LIMK1-203ENST00000435201 B4DLN1 442 aa18.65■□□□□ 0.58
LIMK1-203ENST00000435201 KIF5CO60282 957 aa18.65■□□□□ 0.58
LIMK1-203ENST00000435201 SPDYE6P0CI01 402 aa18.65■□□□□ 0.58
LIMK1-203ENST00000435201 MTIF2P46199 727 aaKnown RBP18.65■□□□□ 0.58
LIMK1-203ENST00000435201 MMP14P50281 582 aa18.65■□□□□ 0.58
LIMK1-203ENST00000435201 LRRC63Q05C16 580 aa18.65■□□□□ 0.58
LIMK1-203ENST00000435201 EHHADHQ08426 723 aa18.65■□□□□ 0.58
LIMK1-203ENST00000435201 IKQ13123 557 aaPredicted RBP18.65■□□□□ 0.58
LIMK1-203ENST00000435201 GLIPR1L2Q4G1C9 344 aa18.65■□□□□ 0.58
LIMK1-203ENST00000435201 TEX2Q8IWB9 1127 aa18.65■□□□□ 0.58
LIMK1-203ENST00000435201 MNS1Q8NEH6 495 aa18.65■□□□□ 0.58
LIMK1-203ENST00000435201 CRYGNQ8WXF5 182 aa18.65■□□□□ 0.58
LIMK1-203ENST00000435201 DDX12PQ92771 950 aa18.65■□□□□ 0.58
LIMK1-203ENST00000435201 IQCDQ96DY2 449 aa18.65■□□□□ 0.58
LIMK1-203ENST00000435201 PSMD1Q99460 953 aa18.65■□□□□ 0.58
LIMK1-203ENST00000435201 SEMA6BQ9H3T3 888 aa18.65■□□□□ 0.58
LIMK1-203ENST00000435201 BMP2KQ9NSY1 1161 aaPredicted RBP18.65■□□□□ 0.58
LIMK1-203ENST00000435201 TTC26A0AVF1 554 aa18.64■□□□□ 0.57
LIMK1-203ENST00000435201 RNF225M0QZC1 329 aaPredicted RBP18.64■□□□□ 0.57
LIMK1-203ENST00000435201 TBX3O15119 743 aa18.64■□□□□ 0.57
LIMK1-203ENST00000435201 EN1Q05925 392 aaPredicted RBP18.64■□□□□ 0.57
LIMK1-203ENST00000435201 TRAF1Q13077 416 aa18.64■□□□□ 0.57
LIMK1-203ENST00000435201 TSR1Q2NL82 804 aaKnown RBP18.64■□□□□ 0.57
LIMK1-203ENST00000435201 KCNK18Q7Z418 384 aa18.64■□□□□ 0.57
LIMK1-203ENST00000435201 TTLL6Q8N841 843 aa18.64■□□□□ 0.57
LIMK1-203ENST00000435201 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.64■□□□□ 0.57
LIMK1-203ENST00000435201 ARHGEF10LQ9HCE6 1279 aa18.64■□□□□ 0.57
LIMK1-203ENST00000435201 SPDYE3A6NKU9 549 aa18.63■□□□□ 0.57
LIMK1-203ENST00000435201 IDEP14735 1019 aa18.63■□□□□ 0.57
LIMK1-203ENST00000435201 MAP3K9P80192 1104 aa18.63■□□□□ 0.57
LIMK1-203ENST00000435201 ARHGAP4P98171 946 aa18.63■□□□□ 0.57
LIMK1-203ENST00000435201 HPS3Q969F9 1004 aa18.63■□□□□ 0.57
LIMK1-203ENST00000435201 FEZ1Q99689 392 aa18.63■□□□□ 0.57
LIMK1-203ENST00000435201 NOC4LQ9BVI4 516 aaKnown RBP18.63■□□□□ 0.57
LIMK1-203ENST00000435201 LZTFL1Q9NQ48 299 aa18.63■□□□□ 0.57
LIMK1-203ENST00000435201 STK24Q9Y6E0 443 aa18.63■□□□□ 0.57
LIMK1-203ENST00000435201 TBC1D8BQ0IIM8 1120 aa18.63■□□□□ 0.57
LIMK1-203ENST00000435201 ECM1Q16610 540 aa18.63■□□□□ 0.57
LIMK1-203ENST00000435201 Q4G0T1 1027 aa18.63■□□□□ 0.57
LIMK1-203ENST00000435201 ARHGAP29Q52LW3 1261 aa18.63■□□□□ 0.57
LIMK1-203ENST00000435201 FKBP15Q5T1M5 1219 aa18.63■□□□□ 0.57
LIMK1-203ENST00000435201 HAUS3Q68CZ6 603 aa18.63■□□□□ 0.57
LIMK1-203ENST00000435201 FAM151AQ8WW52 585 aa18.63■□□□□ 0.57
LIMK1-203ENST00000435201 ERGIC2Q96RQ1 377 aa18.63■□□□□ 0.57
LIMK1-203ENST00000435201 TSG101Q99816 390 aa18.63■□□□□ 0.57
LIMK1-203ENST00000435201 MRFAP1Q9Y605 127 aa18.63■□□□□ 0.57
LIMK1-203ENST00000435201 EFCAB8A8MWE9 144 aa18.62■□□□□ 0.57
LIMK1-203ENST00000435201 VIL1P09327 827 aaKnown RBP18.62■□□□□ 0.57
LIMK1-203ENST00000435201 SREBF1P36956 1147 aa18.62■□□□□ 0.57
LIMK1-203ENST00000435201 JAG1P78504 1218 aa18.62■□□□□ 0.57
LIMK1-203ENST00000435201 DLGAP5Q15398 846 aa18.62■□□□□ 0.57
LIMK1-203ENST00000435201 FIGNQ5HY92 759 aa18.62■□□□□ 0.57
LIMK1-203ENST00000435201 DNAJC19Q96DA6 116 aa18.62■□□□□ 0.57
LIMK1-203ENST00000435201 TTYH3Q9C0H2 523 aa18.62■□□□□ 0.57
LIMK1-203ENST00000435201 MYO1AQ9UBC5 1043 aa18.62■□□□□ 0.57
LIMK1-203ENST00000435201 TCP10L2B9ZVM9 353 aa18.61■□□□□ 0.57
LIMK1-203ENST00000435201 TRIM21P19474 475 aaKnown RBP18.61■□□□□ 0.57
LIMK1-203ENST00000435201 RRP1BQ14684 758 aaKnown RBP18.61■□□□□ 0.57
LIMK1-203ENST00000435201 ERCC6LQ2NKX8 1250 aa18.61■□□□□ 0.57
LIMK1-203ENST00000435201 USH1GQ495M9 461 aa18.61■□□□□ 0.57
LIMK1-203ENST00000435201 MIIPQ5JXC2 388 aa18.61■□□□□ 0.57
LIMK1-203ENST00000435201 OGFOD1Q8N543 542 aa18.61■□□□□ 0.57
LIMK1-203ENST00000435201 ACRBPQ8NEB7 543 aa18.61■□□□□ 0.57
LIMK1-203ENST00000435201 UBXN4Q92575 508 aa18.61■□□□□ 0.57
LIMK1-203ENST00000435201 GJA10Q969M2 543 aa18.61■□□□□ 0.57
LIMK1-203ENST00000435201 GMLQ99445 158 aa18.61■□□□□ 0.57
LIMK1-203ENST00000435201 VPS33BQ9H267 617 aa18.61■□□□□ 0.57
LIMK1-203ENST00000435201 ZNF70Q9UC06 446 aaPredicted RBP18.61■□□□□ 0.57
LIMK1-203ENST00000435201 A0A1W2PQJ5 194 aa18.6■□□□□ 0.57
LIMK1-203ENST00000435201 A0A1W2PRG0 241 aa18.6■□□□□ 0.57
LIMK1-203ENST00000435201 TADA3O75528 432 aa18.6■□□□□ 0.57
LIMK1-203ENST00000435201 COASYQ13057 564 aa18.6■□□□□ 0.57
LIMK1-203ENST00000435201 MYOCDQ8IZQ8 938 aa18.6■□□□□ 0.57
LIMK1-203ENST00000435201 LARGE2Q8N3Y3 721 aa18.6■□□□□ 0.57
LIMK1-203ENST00000435201 LRRN4CLQ8ND94 238 aa18.6■□□□□ 0.57
LIMK1-203ENST00000435201 ERMNQ8TAM6 284 aa18.6■□□□□ 0.57
LIMK1-203ENST00000435201 ETNPPLQ8TBG4 499 aa18.6■□□□□ 0.57
LIMK1-203ENST00000435201 CARD6Q9BX69 1037 aa18.6■□□□□ 0.57
LIMK1-203ENST00000435201 GOPCQ9HD26 462 aa18.6■□□□□ 0.57
LIMK1-203ENST00000435201 PRR12Q9ULL5 1215 aa18.6■□□□□ 0.57
LIMK1-203ENST00000435201 KIAA1024Q9UPX6 916 aa18.6■□□□□ 0.57
LIMK1-203ENST00000435201 EPN1Q9Y6I3 576 aaPredicted RBP18.6■□□□□ 0.57
LIMK1-203ENST00000435201 PIK3CDO00329 1044 aa18.6■□□□□ 0.57
LIMK1-203ENST00000435201 PSMD14O00487 310 aa18.6■□□□□ 0.57
LIMK1-203ENST00000435201 NDUFA10O95299 355 aa18.6■□□□□ 0.57
LIMK1-203ENST00000435201 PLA2G4BP0C869 781 aa18.6■□□□□ 0.57
LIMK1-203ENST00000435201 STAT2P52630 851 aa18.6■□□□□ 0.57
LIMK1-203ENST00000435201 SNAP25P60880 206 aa18.6■□□□□ 0.57
LIMK1-203ENST00000435201 TUBB2AQ13885 445 aa18.6■□□□□ 0.57
LIMK1-203ENST00000435201 MEA1Q16626 185 aa18.6■□□□□ 0.57
LIMK1-203ENST00000435201 MAN2A1Q16706 1144 aa18.6■□□□□ 0.57
LIMK1-203ENST00000435201 SPDYE2Q495Y8 402 aa18.6■□□□□ 0.57
LIMK1-203ENST00000435201 FKBP1CQ5VVH2 108 aa18.6■□□□□ 0.57
LIMK1-203ENST00000435201 CCDC65Q8IXS2 484 aa18.6■□□□□ 0.57
LIMK1-203ENST00000435201 FAM20AQ96MK3 541 aa18.6■□□□□ 0.57
LIMK1-203ENST00000435201 ARID3AQ99856 593 aa18.6■□□□□ 0.57
LIMK1-203ENST00000435201 TUBB2BQ9BVA1 445 aa18.6■□□□□ 0.57
LIMK1-203ENST00000435201 PANK4Q9NVE7 773 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms