RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 SF3B2Q13435 895 aaKnown RBP15.18■□□□□ 0.02
COL6A3-207ENST00000433762 NT5C3AQ9H0P0 336 aa15.18■□□□□ 0.02
COL6A3-207ENST00000433762 ZCCHC17Q9NP64 241 aaKnown RBP15.18■□□□□ 0.02
COL6A3-207ENST00000433762 ARFGEF1Q9Y6D6 1849 aa15.18■□□□□ 0.02
COL6A3-207ENST00000433762 PNMA6FA0A0J9YX94 578 aa15.18■□□□□ 0.02
COL6A3-207ENST00000433762 GNA14O95837 355 aa15.18■□□□□ 0.02
COL6A3-207ENST00000433762 TCP1P17987 556 aaKnown RBP15.18■□□□□ 0.02
COL6A3-207ENST00000433762 HNRNPH2P55795 449 aaKnown RBP15.18■□□□□ 0.02
COL6A3-207ENST00000433762 MARSP56192 900 aaKnown RBP15.18■□□□□ 0.02
COL6A3-207ENST00000433762 SLC4A8Q2Y0W8 1093 aa15.18■□□□□ 0.02
COL6A3-207ENST00000433762 PRR5LQ6MZQ0 368 aa15.18■□□□□ 0.02
COL6A3-207ENST00000433762 LRRC55Q6ZSA7 311 aa15.18■□□□□ 0.02
COL6A3-207ENST00000433762 PCMTD1Q96MG8 357 aaPredicted RBP15.18■□□□□ 0.02
COL6A3-207ENST00000433762 CEP63Q96MT8 703 aa15.18■□□□□ 0.02
COL6A3-207ENST00000433762 MMS19Q96T76 1030 aa15.18■□□□□ 0.02
COL6A3-207ENST00000433762 LACRTQ9GZZ8 138 aa15.18■□□□□ 0.02
COL6A3-207ENST00000433762 TSKSQ9UJT2 592 aa15.18■□□□□ 0.02
COL6A3-207ENST00000433762 SNX12Q9UMY4 172 aa15.18■□□□□ 0.02
COL6A3-207ENST00000433762 MYH7BA7E2Y1 1941 aa15.18■□□□□ 0.02
COL6A3-207ENST00000433762 MYH4Q9Y623 1939 aa15.18■□□□□ 0.02
COL6A3-207ENST00000433762 RBAK-RBAKDNI3L0D1 243 aa15.17■□□□□ 0.02
COL6A3-207ENST00000433762 TULP2O00295 520 aa15.17■□□□□ 0.02
COL6A3-207ENST00000433762 IVLP07476 585 aa15.17■□□□□ 0.02
COL6A3-207ENST00000433762 ACTN2P35609 894 aa15.17■□□□□ 0.02
COL6A3-207ENST00000433762 KCNQ4P56696 695 aa15.17■□□□□ 0.02
COL6A3-207ENST00000433762 GPATCH4Q5T3I0 446 aaKnown RBP15.17■□□□□ 0.02
COL6A3-207ENST00000433762 RNF10Q8N5U6 811 aaKnown RBP15.17■□□□□ 0.02
COL6A3-207ENST00000433762 ALS2CR12Q96Q35 445 aa15.17■□□□□ 0.02
COL6A3-207ENST00000433762 CRAMP1Q96RY5 1269 aa15.17■□□□□ 0.02
COL6A3-207ENST00000433762 RNF14Q9UBS8 474 aa15.17■□□□□ 0.02
COL6A3-207ENST00000433762 BIN2Q9UBW5 565 aaPredicted RBP15.17■□□□□ 0.02
COL6A3-207ENST00000433762 RGS17Q9UGC6 210 aaPredicted RBP15.17■□□□□ 0.02
COL6A3-207ENST00000433762 USP17L5A8MUK1 530 aa15.17■□□□□ 0.02
COL6A3-207ENST00000433762 TXKP42681 527 aa15.17■□□□□ 0.02
COL6A3-207ENST00000433762 MFSD14BQ5SR56 506 aa15.17■□□□□ 0.02
COL6A3-207ENST00000433762 MCTP2Q6DN12 878 aa15.17■□□□□ 0.02
COL6A3-207ENST00000433762 MTMR8Q96EF0 704 aa15.17■□□□□ 0.02
COL6A3-207ENST00000433762 IFIH1Q9BYX4 1025 aaKnown RBP15.17■□□□□ 0.02
COL6A3-207ENST00000433762 RCCD1A6NED2 376 aa15.16■□□□□ 0.02
COL6A3-207ENST00000433762 TTLL1O95922 423 aa15.16■□□□□ 0.02
COL6A3-207ENST00000433762 IDEP14735 1019 aa15.16■□□□□ 0.02
COL6A3-207ENST00000433762 ZCWPW2Q504Y3 356 aa15.16■□□□□ 0.02
COL6A3-207ENST00000433762 FAM196AQ6ZSG2 479 aa15.16■□□□□ 0.02
COL6A3-207ENST00000433762 COG1Q8WTW3 980 aa15.16■□□□□ 0.02
COL6A3-207ENST00000433762 LUC7LQ9NQ29 371 aaKnown RBP15.16■□□□□ 0.02
COL6A3-207ENST00000433762 ARHGAP20Q9P2F6 1191 aa15.16■□□□□ 0.02
COL6A3-207ENST00000433762 PCDHA13Q9Y5I0 950 aa15.16■□□□□ 0.02
COL6A3-207ENST00000433762 TNFRSF8P28908 595 aa15.16■□□□□ 0.02
COL6A3-207ENST00000433762 KIF11P52732 1056 aa15.16■□□□□ 0.02
COL6A3-207ENST00000433762 MRPL12P52815 198 aaKnown RBP15.16■□□□□ 0.02
COL6A3-207ENST00000433762 FKBP3Q00688 224 aaKnown RBP15.16■□□□□ 0.02
COL6A3-207ENST00000433762 ZNF543Q08ER8 600 aa15.16■□□□□ 0.02
COL6A3-207ENST00000433762 ZSCAN26Q16670 478 aa15.16■□□□□ 0.02
COL6A3-207ENST00000433762 MOXD1Q6UVY6 613 aa15.16■□□□□ 0.02
COL6A3-207ENST00000433762 ZC3H3Q8IXZ2 948 aaKnown RBP15.16■□□□□ 0.02
COL6A3-207ENST00000433762 BAP1Q92560 729 aa15.16■□□□□ 0.02
COL6A3-207ENST00000433762 SLC39A2Q9NP94 309 aa15.16■□□□□ 0.02
COL6A3-207ENST00000433762 VPS18Q9P253 973 aa15.16■□□□□ 0.02
COL6A3-207ENST00000433762 KLRG2A4D1S0 409 aaPredicted RBP15.15■□□□□ 0.02
COL6A3-207ENST00000433762 ENC1O14682 589 aa15.15■□□□□ 0.02
COL6A3-207ENST00000433762 ZNF263O14978 683 aa15.15■□□□□ 0.02
COL6A3-207ENST00000433762 EDIL3O43854 480 aa15.15■□□□□ 0.02
COL6A3-207ENST00000433762 ASTE1Q2TB18 679 aaPredicted RBP15.15■□□□□ 0.02
COL6A3-207ENST00000433762 PDXDC1Q6P996 788 aa15.15■□□□□ 0.02
COL6A3-207ENST00000433762 PPP4R3CPQ6ZMV5 832 aa15.15■□□□□ 0.02
COL6A3-207ENST00000433762 MYOCDQ8IZQ8 938 aa15.15■□□□□ 0.02
COL6A3-207ENST00000433762 CCDC24Q8N4L8 307 aa15.15■□□□□ 0.02
COL6A3-207ENST00000433762 NEK11Q8NG66 645 aa15.15■□□□□ 0.02
COL6A3-207ENST00000433762 SNX29Q8TEQ0 813 aa15.15■□□□□ 0.02
COL6A3-207ENST00000433762 CUL5Q93034 780 aa15.15■□□□□ 0.02
COL6A3-207ENST00000433762 CEP72Q9P209 647 aa15.15■□□□□ 0.02
COL6A3-207ENST00000433762 HDAC6Q9UBN7 1215 aa15.15■□□□□ 0.02
COL6A3-207ENST00000433762 DAGLAQ9Y4D2 1042 aa15.15■□□□□ 0.02
COL6A3-207ENST00000433762 HYOU1Q9Y4L1 999 aa15.15■□□□□ 0.02
COL6A3-207ENST00000433762 STK24Q9Y6E0 443 aa15.15■□□□□ 0.02
COL6A3-207ENST00000433762 LRRIQ3A6PVS8 624 aaPredicted RBP15.14■□□□□ 0.01
COL6A3-207ENST00000433762 SLC37A4O43826 429 aa15.14■□□□□ 0.01
COL6A3-207ENST00000433762 TFRCP02786 760 aaKnown RBP15.14■□□□□ 0.01
COL6A3-207ENST00000433762 HMGB2P26583 209 aaKnown RBP15.14■□□□□ 0.01
COL6A3-207ENST00000433762 KLK7P49862 253 aa15.14■□□□□ 0.01
COL6A3-207ENST00000433762 POTEAQ6S8J7 498 aa15.14■□□□□ 0.01
COL6A3-207ENST00000433762 CCNI2Q6ZMN8 369 aaPredicted RBP15.14■□□□□ 0.01
COL6A3-207ENST00000433762 LEKR1Q6ZMV7 388 aa15.14■□□□□ 0.01
COL6A3-207ENST00000433762 AMIGO3Q86WK7 504 aa15.14■□□□□ 0.01
COL6A3-207ENST00000433762 CAGE1Q8TC20 777 aa15.14■□□□□ 0.01
COL6A3-207ENST00000433762 DDX12PQ92771 950 aa15.14■□□□□ 0.01
COL6A3-207ENST00000433762 BMP2KQ9NSY1 1161 aaPredicted RBP15.14■□□□□ 0.01
COL6A3-207ENST00000433762 FAM184BQ9ULE4 1060 aa15.14■□□□□ 0.01
COL6A3-207ENST00000433762 HPCAL4Q9UM19 191 aa15.14■□□□□ 0.01
COL6A3-207ENST00000433762 ATP8B3O60423 1300 aa15.14■□□□□ 0.01
COL6A3-207ENST00000433762 CCDC96Q2M329 555 aa15.14■□□□□ 0.01
COL6A3-207ENST00000433762 GLE1Q53GS7 698 aaKnown RBP15.14■□□□□ 0.01
COL6A3-207ENST00000433762 SMIM5Q71RC9 77 aa15.14■□□□□ 0.01
COL6A3-207ENST00000433762 CREG2Q8IUH2 290 aa15.14■□□□□ 0.01
COL6A3-207ENST00000433762 TEX2Q8IWB9 1127 aa15.14■□□□□ 0.01
COL6A3-207ENST00000433762 TBC1D16Q8TBP0 767 aa15.14■□□□□ 0.01
COL6A3-207ENST00000433762 DNAJC19Q96DA6 116 aa15.14■□□□□ 0.01
COL6A3-207ENST00000433762 CPVLQ9H3G5 476 aa15.14■□□□□ 0.01
COL6A3-207ENST00000433762 TMEM260Q9NX78 707 aa15.14■□□□□ 0.01
COL6A3-207ENST00000433762 LMAN1P49257 510 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms