RNA–Protein interactions for RNA: ENST00000432645.6

HDAC9-212, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-212ENST00000432645 ZBTB21Q9ULJ3 1066 aa9.31□□□□□ -0.92
HDAC9-212ENST00000432645 PRR12Q9ULL5 1215 aa9.31□□□□□ -0.92
HDAC9-212ENST00000432645 GREB1LQ9C091 1923 aaPredicted RBP9.31□□□□□ -0.92
HDAC9-212ENST00000432645 PES1O00541 588 aaKnown RBP9.31□□□□□ -0.92
HDAC9-212ENST00000432645 NRDCO43847 1150 aa9.31□□□□□ -0.92
HDAC9-212ENST00000432645 FXR2P51116 673 aaKnown RBP eCLIP9.31□□□□□ -0.92
HDAC9-212ENST00000432645 STAT2P52630 851 aa9.31□□□□□ -0.92
HDAC9-212ENST00000432645 KRT31Q15323 416 aa9.31□□□□□ -0.92
HDAC9-212ENST00000432645 PRR16Q569H4 304 aa9.31□□□□□ -0.92
HDAC9-212ENST00000432645 KRT79Q5XKE5 535 aa9.31□□□□□ -0.92
HDAC9-212ENST00000432645 CIAPIN1Q6FI81 312 aa9.31□□□□□ -0.92
HDAC9-212ENST00000432645 FCHSD1Q86WN1 690 aa9.31□□□□□ -0.92
HDAC9-212ENST00000432645 PDCL2Q8N4E4 241 aa9.31□□□□□ -0.92
HDAC9-212ENST00000432645 RAB34Q9BZG1 259 aa9.31□□□□□ -0.92
HDAC9-212ENST00000432645 SLC39A2Q9NP94 309 aa9.31□□□□□ -0.92
HDAC9-212ENST00000432645 MYOZ2Q9NPC6 264 aa9.31□□□□□ -0.92
HDAC9-212ENST00000432645 BLOC1S4Q9NUP1 217 aa9.31□□□□□ -0.92
HDAC9-212ENST00000432645 EXOC1Q9NV70 894 aa9.31□□□□□ -0.92
HDAC9-212ENST00000432645 TAB2Q9NYJ8 693 aa9.31□□□□□ -0.92
HDAC9-212ENST00000432645 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.31□□□□□ -0.92
HDAC9-212ENST00000432645 V9GYY5 206 aaPredicted RBP9.31□□□□□ -0.92
HDAC9-212ENST00000432645 N4BP3O15049 544 aa9.3□□□□□ -0.92
HDAC9-212ENST00000432645 RHOBTB3O94955 611 aa9.3□□□□□ -0.92
HDAC9-212ENST00000432645 SSBP05455 408 aaKnown RBP eCLIP9.3□□□□□ -0.92
HDAC9-212ENST00000432645 IDEP14735 1019 aa9.3□□□□□ -0.92
HDAC9-212ENST00000432645 GTF2F1P35269 517 aaKnown RBP eCLIP9.3□□□□□ -0.92
HDAC9-212ENST00000432645 STAT3P40763 770 aa9.3□□□□□ -0.92
HDAC9-212ENST00000432645 CEP135Q66GS9 1140 aa9.3□□□□□ -0.92
HDAC9-212ENST00000432645 SV2BQ7L1I2 683 aa9.3□□□□□ -0.92
HDAC9-212ENST00000432645 ARMCX6Q7L4S7 300 aa9.3□□□□□ -0.92
HDAC9-212ENST00000432645 MYMKA6NI61 221 aa9.3□□□□□ -0.92
HDAC9-212ENST00000432645 KCNJ18B7U540 433 aa9.3□□□□□ -0.92
HDAC9-212ENST00000432645 POLD1P28340 1107 aa9.3□□□□□ -0.92
HDAC9-212ENST00000432645 TBX2Q13207 712 aaPredicted RBP9.3□□□□□ -0.92
HDAC9-212ENST00000432645 ORC2Q13416 577 aaPredicted RBP9.3□□□□□ -0.92
HDAC9-212ENST00000432645 KCNJ12Q14500 433 aa9.3□□□□□ -0.92
HDAC9-212ENST00000432645 KCNB1Q14721 858 aa9.3□□□□□ -0.92
HDAC9-212ENST00000432645 R3HDM1Q15032 1099 aaKnown RBP9.3□□□□□ -0.92
HDAC9-212ENST00000432645 FILIP1LQ4L180 1135 aa9.3□□□□□ -0.92
HDAC9-212ENST00000432645 EXOC8Q8IYI6 725 aa9.3□□□□□ -0.92
HDAC9-212ENST00000432645 TC2NQ8N9U0 490 aa9.3□□□□□ -0.92
HDAC9-212ENST00000432645 GIMAP8Q8ND71 665 aaPredicted RBP9.3□□□□□ -0.92
HDAC9-212ENST00000432645 AGBL3Q8NEM8 1001 aa9.3□□□□□ -0.92
HDAC9-212ENST00000432645 TBC1D5Q92609 795 aa9.3□□□□□ -0.92
HDAC9-212ENST00000432645 LARP4BQ92615 738 aaKnown RBP9.3□□□□□ -0.92
HDAC9-212ENST00000432645 TRIM47Q96LD4 638 aa9.3□□□□□ -0.92
HDAC9-212ENST00000432645 SRRTQ9BXP5 876 aaKnown RBP9.3□□□□□ -0.92
HDAC9-212ENST00000432645 CUEDC2Q9H467 287 aa9.3□□□□□ -0.92
HDAC9-212ENST00000432645 FBXO28Q9NVF7 368 aa9.3□□□□□ -0.92
HDAC9-212ENST00000432645 TMX2Q9Y320 296 aa9.3□□□□□ -0.92
HDAC9-212ENST00000432645 CCDC189A1A4V9 331 aa9.3□□□□□ -0.92
HDAC9-212ENST00000432645 SPDYE3A6NKU9 549 aa9.3□□□□□ -0.92
HDAC9-212ENST00000432645 NFKBIEO00221 500 aa9.3□□□□□ -0.92
HDAC9-212ENST00000432645 OPLAHO14841 1288 aa9.3□□□□□ -0.92
HDAC9-212ENST00000432645 CFBP00751 764 aa9.3□□□□□ -0.92
HDAC9-212ENST00000432645 TGFB2P61812 414 aa9.3□□□□□ -0.92
HDAC9-212ENST00000432645 ARHGAP4P98171 946 aa9.3□□□□□ -0.92
HDAC9-212ENST00000432645 AMPD3Q01432 767 aa9.3□□□□□ -0.92
HDAC9-212ENST00000432645 RBL2Q08999 1139 aa9.3□□□□□ -0.92
HDAC9-212ENST00000432645 STIM1Q13586 685 aa9.3□□□□□ -0.92
HDAC9-212ENST00000432645 PDIA5Q14554 519 aa9.3□□□□□ -0.92
HDAC9-212ENST00000432645 ZC3H12AQ5D1E8 599 aaKnown RBP9.3□□□□□ -0.92
HDAC9-212ENST00000432645 TCP11X2Q5H9J9 407 aa9.3□□□□□ -0.92
HDAC9-212ENST00000432645 SAMD7Q7Z3H4 446 aa9.3□□□□□ -0.92
HDAC9-212ENST00000432645 CYP2W1Q8TAV3 490 aa9.3□□□□□ -0.92
HDAC9-212ENST00000432645 PPP1R13BQ96KQ4 1090 aa9.3□□□□□ -0.92
HDAC9-212ENST00000432645 CTAGE1Q96RT6 745 aa9.3□□□□□ -0.92
HDAC9-212ENST00000432645 BAG1Q99933 345 aaPredicted RBP9.3□□□□□ -0.92
HDAC9-212ENST00000432645 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.3□□□□□ -0.92
HDAC9-212ENST00000432645 GJA3Q9Y6H8 435 aa9.3□□□□□ -0.92
HDAC9-212ENST00000432645 ASTN2O75129 1339 aaPredicted RBP9.29□□□□□ -0.92
HDAC9-212ENST00000432645 PSMA7O14818 248 aa9.29□□□□□ -0.92
HDAC9-212ENST00000432645 MYL1P05976 194 aa9.29□□□□□ -0.92
HDAC9-212ENST00000432645 RAD51AP2Q09MP3 1159 aa9.29□□□□□ -0.92
HDAC9-212ENST00000432645 DGKZQ13574 1117 aa9.29□□□□□ -0.92
HDAC9-212ENST00000432645 RASA3Q14644 834 aa9.29□□□□□ -0.92
HDAC9-212ENST00000432645 ICE2Q659A1 982 aa9.29□□□□□ -0.92
HDAC9-212ENST00000432645 SLC30A10Q6XR72 485 aa9.29□□□□□ -0.92
HDAC9-212ENST00000432645 TSPAN18Q96SJ8 248 aa9.29□□□□□ -0.92
HDAC9-212ENST00000432645 C7orf25Q9BPX7 421 aa9.29□□□□□ -0.92
HDAC9-212ENST00000432645 GOPCQ9HD26 462 aa9.29□□□□□ -0.92
HDAC9-212ENST00000432645 MED4Q9NPJ6 270 aa9.29□□□□□ -0.92
HDAC9-212ENST00000432645 CAP2P40123 477 aa9.29□□□□□ -0.92
HDAC9-212ENST00000432645 UBXN2AP68543 259 aa9.29□□□□□ -0.92
HDAC9-212ENST00000432645 RASSF7Q02833 373 aa9.29□□□□□ -0.92
HDAC9-212ENST00000432645 NYAP1Q6ZVC0 841 aa9.29□□□□□ -0.92
HDAC9-212ENST00000432645 IRF2BP1Q8IU81 584 aa9.29□□□□□ -0.92
HDAC9-212ENST00000432645 TMEM139Q8IV31 216 aa9.29□□□□□ -0.92
HDAC9-212ENST00000432645 CCDC47Q96A33 483 aaKnown RBP9.29□□□□□ -0.92
HDAC9-212ENST00000432645 TMX1Q9H3N1 280 aa9.29□□□□□ -0.92
HDAC9-212ENST00000432645 KIAA1024Q9UPX6 916 aa9.29□□□□□ -0.92
HDAC9-212ENST00000432645 POTEB3A0JP26 581 aa9.28□□□□□ -0.92
HDAC9-212ENST00000432645 POTECB2RU33 542 aa9.28□□□□□ -0.92
HDAC9-212ENST00000432645 E9PMD0 336 aa9.28□□□□□ -0.92
HDAC9-212ENST00000432645 FAM86B1E9PN63 330 aa9.28□□□□□ -0.92
HDAC9-212ENST00000432645 FAM86B2P0C5J1 330 aa9.28□□□□□ -0.92
HDAC9-212ENST00000432645 GCFC2P16383 781 aaKnown RBP9.28□□□□□ -0.92
HDAC9-212ENST00000432645 ERCC3P19447 782 aa9.28□□□□□ -0.92
HDAC9-212ENST00000432645 GUCY2CP25092 1073 aa9.28□□□□□ -0.92
HDAC9-212ENST00000432645 CASP14P31944 242 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms