RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 RGS20O76081 388 aa16.46■□□□□ 0.23
CSTF3-202ENST00000431742 MMP1P03956 469 aa16.46■□□□□ 0.23
CSTF3-202ENST00000431742 MRPS9P82933 396 aaKnown RBP16.46■□□□□ 0.23
CSTF3-202ENST00000431742 KRT40Q6A162 431 aa16.46■□□□□ 0.23
CSTF3-202ENST00000431742 PGBD1Q96JS3 809 aa16.46■□□□□ 0.23
CSTF3-202ENST00000431742 C8orf76Q96K31 380 aa16.46■□□□□ 0.23
CSTF3-202ENST00000431742 RNF208Q9H0X6 261 aa16.46■□□□□ 0.23
CSTF3-202ENST00000431742 EHMT1Q9H9B1 1298 aa16.46■□□□□ 0.23
CSTF3-202ENST00000431742 STAM2O75886 525 aa16.45■□□□□ 0.22
CSTF3-202ENST00000431742 MYCP01106 439 aaPredicted RBP16.45■□□□□ 0.22
CSTF3-202ENST00000431742 GJB1P08034 283 aa16.45■□□□□ 0.22
CSTF3-202ENST00000431742 MYCLP12524 364 aaPredicted RBP16.45■□□□□ 0.22
CSTF3-202ENST00000431742 AKR1A1P14550 325 aa16.45■□□□□ 0.22
CSTF3-202ENST00000431742 GJB2P29033 226 aa16.45■□□□□ 0.22
CSTF3-202ENST00000431742 CCDC144BQ3MJ40 725 aa16.45■□□□□ 0.22
CSTF3-202ENST00000431742 LHX8Q68G74 356 aa16.45■□□□□ 0.22
CSTF3-202ENST00000431742 EEPD1Q7L9B9 569 aa16.45■□□□□ 0.22
CSTF3-202ENST00000431742 FAM184AQ8NB25 1140 aa16.45■□□□□ 0.22
CSTF3-202ENST00000431742 FBXO18Q8NFZ0 1043 aa16.45■□□□□ 0.22
CSTF3-202ENST00000431742 OXER1Q8TDS5 423 aa16.45■□□□□ 0.22
CSTF3-202ENST00000431742 TNFRSF25Q93038 417 aa16.45■□□□□ 0.22
CSTF3-202ENST00000431742 INPP4AQ96PE3 977 aaPredicted RBP16.45■□□□□ 0.22
CSTF3-202ENST00000431742 PDGFCQ9NRA1 345 aa16.45■□□□□ 0.22
CSTF3-202ENST00000431742 DDX20Q9UHI6 824 aaKnown RBP16.45■□□□□ 0.22
CSTF3-202ENST00000431742 SMC3Q9UQE7 1217 aa16.45■□□□□ 0.22
CSTF3-202ENST00000431742 KIF3AQ9Y496 699 aa16.45■□□□□ 0.22
CSTF3-202ENST00000431742 MSCO60682 206 aa16.44■□□□□ 0.22
CSTF3-202ENST00000431742 KRT2P35908 639 aa16.44■□□□□ 0.22
CSTF3-202ENST00000431742 ADCYAP1R1P41586 468 aa16.44■□□□□ 0.22
CSTF3-202ENST00000431742 FOSBP53539 338 aa16.44■□□□□ 0.22
CSTF3-202ENST00000431742 TRIM29Q14134 588 aa16.44■□□□□ 0.22
CSTF3-202ENST00000431742 DEFB118Q96PH6 123 aa16.44■□□□□ 0.22
CSTF3-202ENST00000431742 CRISPLD2Q9H0B8 497 aa16.44■□□□□ 0.22
CSTF3-202ENST00000431742 FAM184BQ9ULE4 1060 aa16.44■□□□□ 0.22
CSTF3-202ENST00000431742 WDR81Q562E7 1941 aa16.44■□□□□ 0.22
CSTF3-202ENST00000431742 MYH15Q9Y2K3 1946 aa16.44■□□□□ 0.22
CSTF3-202ENST00000431742 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.43■□□□□ 0.22
CSTF3-202ENST00000431742 EDIL3O43854 480 aa16.43■□□□□ 0.22
CSTF3-202ENST00000431742 CYP3A4P08684 503 aa16.43■□□□□ 0.22
CSTF3-202ENST00000431742 CNGA1P29973 690 aa16.43■□□□□ 0.22
CSTF3-202ENST00000431742 ARHGAP4P98171 946 aa16.43■□□□□ 0.22
CSTF3-202ENST00000431742 CCDC62Q6P9F0 684 aa16.43■□□□□ 0.22
CSTF3-202ENST00000431742 KRT25Q7Z3Z0 450 aa16.43■□□□□ 0.22
CSTF3-202ENST00000431742 DIS3L2Q8IYB7 885 aaKnown RBP16.43■□□□□ 0.22
CSTF3-202ENST00000431742 U2AF1L4Q8WU68 220 aaKnown RBP16.43■□□□□ 0.22
CSTF3-202ENST00000431742 SCFD2Q8WU76 684 aa16.43■□□□□ 0.22
CSTF3-202ENST00000431742 UBIAD1Q9Y5Z9 338 aa16.43■□□□□ 0.22
CSTF3-202ENST00000431742 ARIH2O95376 493 aa16.42■□□□□ 0.22
CSTF3-202ENST00000431742 SGPL1O95470 568 aa16.42■□□□□ 0.22
CSTF3-202ENST00000431742 SMPD1P17405 629 aa16.42■□□□□ 0.22
CSTF3-202ENST00000431742 ICAM3P32942 547 aa16.42■□□□□ 0.22
CSTF3-202ENST00000431742 GJA8P48165 433 aa16.42■□□□□ 0.22
CSTF3-202ENST00000431742 GUCY1B3Q02153 619 aa16.42■□□□□ 0.22
CSTF3-202ENST00000431742 TNFAIP2Q03169 654 aa16.42■□□□□ 0.22
CSTF3-202ENST00000431742 NR5A1Q13285 461 aa16.42■□□□□ 0.22
CSTF3-202ENST00000431742 DUSP28Q4G0W2 176 aa16.42■□□□□ 0.22
CSTF3-202ENST00000431742 TMEM63BQ5T3F8 832 aa16.42■□□□□ 0.22
CSTF3-202ENST00000431742 IQSEC1Q6DN90 963 aa16.42■□□□□ 0.22
CSTF3-202ENST00000431742 LENG1Q96BZ8 264 aaPredicted RBP16.42■□□□□ 0.22
CSTF3-202ENST00000431742 ZFP91Q96JP5 570 aaPredicted RBP16.42■□□□□ 0.22
CSTF3-202ENST00000431742 WDR11Q9BZH6 1224 aa16.42■□□□□ 0.22
CSTF3-202ENST00000431742 BRMS1Q9HCU9 246 aa16.42■□□□□ 0.22
CSTF3-202ENST00000431742 OGDHLQ9ULD0 1010 aa16.42■□□□□ 0.22
CSTF3-202ENST00000431742 GNEQ9Y223 722 aaKnown RBP16.42■□□□□ 0.22
CSTF3-202ENST00000431742 POTEFA5A3E0 1075 aa16.41■□□□□ 0.22
CSTF3-202ENST00000431742 BTBD18B2RXH4 712 aa16.41■□□□□ 0.22
CSTF3-202ENST00000431742 DUSP11O75319 330 aaKnown RBP16.41■□□□□ 0.22
CSTF3-202ENST00000431742 RARBP10826 455 aa16.41■□□□□ 0.22
CSTF3-202ENST00000431742 ITGB5P18084 799 aa16.41■□□□□ 0.22
CSTF3-202ENST00000431742 NKX3-2P78367 333 aa16.41■□□□□ 0.22
CSTF3-202ENST00000431742 SEMA3FQ13275 785 aa16.41■□□□□ 0.22
CSTF3-202ENST00000431742 TTLL4Q14679 1199 aa16.41■□□□□ 0.22
CSTF3-202ENST00000431742 GNPTABQ3T906 1256 aa16.41■□□□□ 0.22
CSTF3-202ENST00000431742 EARS2Q5JPH6 523 aaKnown RBP16.41■□□□□ 0.22
CSTF3-202ENST00000431742 SEPT14Q6ZU15 432 aa16.41■□□□□ 0.22
CSTF3-202ENST00000431742 GPRASP2Q96D09 838 aa16.41■□□□□ 0.22
CSTF3-202ENST00000431742 TMEM106CQ9BVX2 250 aa16.41■□□□□ 0.22
CSTF3-202ENST00000431742 UPF3AQ9H1J1 476 aaKnown RBP16.41■□□□□ 0.22
CSTF3-202ENST00000431742 SYNRGQ9UMZ2 1314 aa16.41■□□□□ 0.22
CSTF3-202ENST00000431742 IGLV3-22A0A075B6J6 115 aa16.4■□□□□ 0.22
CSTF3-202ENST00000431742 CCDC194A0A1B0GVG4 234 aa16.4■□□□□ 0.22
CSTF3-202ENST00000431742 FAM205CA6NFA0 338 aa16.4■□□□□ 0.22
CSTF3-202ENST00000431742 SPATA31C2B4DYI2 1134 aa16.4■□□□□ 0.22
CSTF3-202ENST00000431742 NKRFO15226 690 aaKnown RBP eCLIP16.4■□□□□ 0.22
CSTF3-202ENST00000431742 FIBPO43427 364 aa16.4■□□□□ 0.22
CSTF3-202ENST00000431742 ADAMTS4O75173 837 aa16.4■□□□□ 0.22
CSTF3-202ENST00000431742 CAPN2P17655 700 aa16.4■□□□□ 0.22
CSTF3-202ENST00000431742 CIITAP33076 1130 aa16.4■□□□□ 0.22
CSTF3-202ENST00000431742 NONOQ15233 471 aaKnown RBP eCLIP16.4■□□□□ 0.22
CSTF3-202ENST00000431742 SAFBQ15424 915 aaKnown RBP eCLIP16.4■□□□□ 0.22
CSTF3-202ENST00000431742 CEP55Q53EZ4 464 aa16.4■□□□□ 0.22
CSTF3-202ENST00000431742 ANO1Q5XXA6 986 aa16.4■□□□□ 0.22
CSTF3-202ENST00000431742 KCNV1Q6PIU1 500 aa16.4■□□□□ 0.22
CSTF3-202ENST00000431742 NIPA1Q7RTP0 329 aa16.4■□□□□ 0.22
CSTF3-202ENST00000431742 TBCKQ8TEA7 893 aa16.4■□□□□ 0.22
CSTF3-202ENST00000431742 MXRA8Q9BRK3 442 aa16.4■□□□□ 0.22
CSTF3-202ENST00000431742 FOXP1Q9H334 677 aaPredicted RBP16.4■□□□□ 0.22
CSTF3-202ENST00000431742 JADE2Q9NQC1 790 aa16.4■□□□□ 0.22
CSTF3-202ENST00000431742 RTEL1Q9NZ71 1219 aa16.4■□□□□ 0.22
CSTF3-202ENST00000431742 DDX41Q9UJV9 622 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms