RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.75□□□□□ -0.85
CDH13-203ENST00000431540 GTPBP6O43824 516 aaPredicted RBP9.75□□□□□ -0.85
CDH13-203ENST00000431540 SMARCA5O60264 1052 aaPredicted RBP9.75□□□□□ -0.85
CDH13-203ENST00000431540 SNHG28P0DPA3 235 aa9.75□□□□□ -0.85
CDH13-203ENST00000431540 ACRP10323 421 aa9.75□□□□□ -0.85
CDH13-203ENST00000431540 BMP1P13497 986 aa9.75□□□□□ -0.85
CDH13-203ENST00000431540 ATP2A2P16615 1042 aaKnown RBP9.75□□□□□ -0.85
CDH13-203ENST00000431540 MX1P20591 662 aa9.75□□□□□ -0.85
CDH13-203ENST00000431540 ALDH5A1P51649 535 aaPredicted RBP9.75□□□□□ -0.85
CDH13-203ENST00000431540 MFAP1P55081 439 aaKnown RBP9.75□□□□□ -0.85
CDH13-203ENST00000431540 BEX3Q00994 111 aa9.75□□□□□ -0.85
CDH13-203ENST00000431540 RBL2Q08999 1139 aa9.75□□□□□ -0.85
CDH13-203ENST00000431540 PPP1R18Q6NYC8 613 aa9.75□□□□□ -0.85
CDH13-203ENST00000431540 DGKHQ86XP1 1220 aa9.75□□□□□ -0.85
CDH13-203ENST00000431540 RETREG2Q8NC44 543 aa9.75□□□□□ -0.85
CDH13-203ENST00000431540 IWS1Q96ST2 819 aa9.75□□□□□ -0.85
CDH13-203ENST00000431540 FSD1Q9BTV5 496 aa9.75□□□□□ -0.85
CDH13-203ENST00000431540 HOMER2Q9NSB8 354 aa9.75□□□□□ -0.85
CDH13-203ENST00000431540 GRXCR1A8MXD5 290 aa9.74□□□□□ -0.85
CDH13-203ENST00000431540 RANBP6O60518 1105 aaKnown RBP9.74□□□□□ -0.85
CDH13-203ENST00000431540 TRAF1Q13077 416 aa9.74□□□□□ -0.85
CDH13-203ENST00000431540 BAATQ14032 418 aaPredicted RBP9.74□□□□□ -0.85
CDH13-203ENST00000431540 ADGRE1Q14246 886 aa9.74□□□□□ -0.85
CDH13-203ENST00000431540 TTLL4Q14679 1199 aa9.74□□□□□ -0.85
CDH13-203ENST00000431540 MCMDC2Q4G0Z9 681 aa9.74□□□□□ -0.85
CDH13-203ENST00000431540 MUM1L1Q5H9M0 696 aa9.74□□□□□ -0.85
CDH13-203ENST00000431540 SYDE2Q5VT97 1194 aa9.74□□□□□ -0.85
CDH13-203ENST00000431540 KCNV1Q6PIU1 500 aa9.74□□□□□ -0.85
CDH13-203ENST00000431540 RNF207Q6ZRF8 634 aa9.74□□□□□ -0.85
CDH13-203ENST00000431540 FAM43BQ6ZT52 329 aaPredicted RBP9.74□□□□□ -0.85
CDH13-203ENST00000431540 KCTD1Q719H9 257 aa9.74□□□□□ -0.85
CDH13-203ENST00000431540 OTOP2Q7RTS6 562 aa9.74□□□□□ -0.85
CDH13-203ENST00000431540 USP38Q8NB14 1042 aa9.74□□□□□ -0.85
CDH13-203ENST00000431540 AFAP1L1Q8TED9 768 aa9.74□□□□□ -0.85
CDH13-203ENST00000431540 ANKS1AQ92625 1134 aa9.74□□□□□ -0.85
CDH13-203ENST00000431540 TRPV6Q9H1D0 765 aa9.74□□□□□ -0.85
CDH13-203ENST00000431540 WNT8AQ9H1J5 351 aa9.74□□□□□ -0.85
CDH13-203ENST00000431540 RNF41Q9H4P4 317 aaPredicted RBP9.74□□□□□ -0.85
CDH13-203ENST00000431540 PDGFCQ9NRA1 345 aa9.74□□□□□ -0.85
CDH13-203ENST00000431540 FGAP02671 866 aa9.73□□□□□ -0.85
CDH13-203ENST00000431540 IQCF3P0C7M6 154 aa9.73□□□□□ -0.85
CDH13-203ENST00000431540 PDE4DQ08499 809 aa9.73□□□□□ -0.85
CDH13-203ENST00000431540 PPP2R5BQ15173 497 aa9.73□□□□□ -0.85
CDH13-203ENST00000431540 PPP2R2DQ66LE6 453 aa9.73□□□□□ -0.85
CDH13-203ENST00000431540 NSMFQ6X4W1 530 aa9.73□□□□□ -0.85
CDH13-203ENST00000431540 MCF2L2Q86YR7 1114 aa9.73□□□□□ -0.85
CDH13-203ENST00000431540 ADAMTS19Q8TE59 1207 aa9.73□□□□□ -0.85
CDH13-203ENST00000431540 EMID1Q96A84 441 aaPredicted RBP9.73□□□□□ -0.85
CDH13-203ENST00000431540 VWCEQ96DN2 955 aa9.73□□□□□ -0.85
CDH13-203ENST00000431540 UHRF1Q96T88 793 aaPredicted RBP9.73□□□□□ -0.85
CDH13-203ENST00000431540 TMEM47Q9BQJ4 181 aa9.73□□□□□ -0.85
CDH13-203ENST00000431540 NKX2-4Q9H2Z4 354 aa9.73□□□□□ -0.85
CDH13-203ENST00000431540 SEPT9Q9UHD8 586 aaPredicted RBP9.73□□□□□ -0.85
CDH13-203ENST00000431540 SALL3Q9BXA9 1300 aa9.73□□□□□ -0.85
CDH13-203ENST00000431540 BRWD1Q9NSI6 2320 aa9.73□□□□□ -0.85
CDH13-203ENST00000431540 REV3LO60673 3130 aa9.72□□□□□ -0.85
CDH13-203ENST00000431540 ABHD14A-ACY1A0A1B0GW23 586 aa9.72□□□□□ -0.85
CDH13-203ENST00000431540 TGFB3P10600 412 aa9.72□□□□□ -0.85
CDH13-203ENST00000431540 PDHBP11177 359 aa9.72□□□□□ -0.85
CDH13-203ENST00000431540 CASTP20810 708 aaKnown RBP9.72□□□□□ -0.85
CDH13-203ENST00000431540 IGFBP4P22692 258 aa9.72□□□□□ -0.85
CDH13-203ENST00000431540 CCL23P55773 120 aa9.72□□□□□ -0.85
CDH13-203ENST00000431540 GHRHRQ02643 423 aa9.72□□□□□ -0.85
CDH13-203ENST00000431540 ZNF543Q08ER8 600 aa9.72□□□□□ -0.85
CDH13-203ENST00000431540 NBPF20Q3BBV1 942 aa9.72□□□□□ -0.85
CDH13-203ENST00000431540 PPP1R15BQ5SWA1 713 aa9.72□□□□□ -0.85
CDH13-203ENST00000431540 CCDC62Q6P9F0 684 aa9.72□□□□□ -0.85
CDH13-203ENST00000431540 MFSD6Q6ZSS7 791 aa9.72□□□□□ -0.85
CDH13-203ENST00000431540 STK11IPQ8N1F8 1099 aa9.72□□□□□ -0.85
CDH13-203ENST00000431540 NSUN6Q8TEA1 469 aaKnown RBP9.72□□□□□ -0.85
CDH13-203ENST00000431540 CLEC4DQ8WXI8 215 aa9.72□□□□□ -0.85
CDH13-203ENST00000431540 SEC62Q99442 399 aaKnown RBP9.72□□□□□ -0.85
CDH13-203ENST00000431540 KATNAL1Q9BW62 490 aa9.72□□□□□ -0.85
CDH13-203ENST00000431540 YBX2Q9Y2T7 364 aaKnown RBP9.72□□□□□ -0.85
CDH13-203ENST00000431540 SIP14410 1827 aa9.71□□□□□ -0.85
CDH13-203ENST00000431540 PTPDC1A2A3K4 754 aa9.71□□□□□ -0.86
CDH13-203ENST00000431540 FOXP2O15409 715 aa9.71□□□□□ -0.86
CDH13-203ENST00000431540 PPFIA4O75335 1185 aa9.71□□□□□ -0.86
CDH13-203ENST00000431540 EIF3JO75822 258 aaKnown RBP9.71□□□□□ -0.86
CDH13-203ENST00000431540 TXNP10599 105 aaKnown RBP9.71□□□□□ -0.86
CDH13-203ENST00000431540 RPS6P62753 249 aaKnown RBP9.71□□□□□ -0.86
CDH13-203ENST00000431540 STXBP2Q15833 593 aa9.71□□□□□ -0.86
CDH13-203ENST00000431540 LCE2AQ5TA79 106 aaPredicted RBP9.71□□□□□ -0.86
CDH13-203ENST00000431540 FBXO16Q8IX29 292 aaPredicted RBP9.71□□□□□ -0.86
CDH13-203ENST00000431540 OR6J1Q8NGC5 347 aa9.71□□□□□ -0.86
CDH13-203ENST00000431540 ESR2Q92731 530 aa9.71□□□□□ -0.86
CDH13-203ENST00000431540 PCDHGA10Q9Y5H3 936 aa9.71□□□□□ -0.86
CDH13-203ENST00000431540 MTCH2Q9Y6C9 303 aa9.71□□□□□ -0.86
CDH13-203ENST00000431540 ABCB11O95342 1321 aa9.71□□□□□ -0.86
CDH13-203ENST00000431540 MICAL3Q7RTP6 2002 aa9.71□□□□□ -0.86
CDH13-203ENST00000431540 PTPRSQ13332 1948 aa9.7□□□□□ -0.86
CDH13-203ENST00000431540 GH1P01241 217 aa9.7□□□□□ -0.86
CDH13-203ENST00000431540 CXCL10P02778 98 aa9.7□□□□□ -0.86
CDH13-203ENST00000431540 HSPD1P10809 573 aaKnown RBP9.7□□□□□ -0.86
CDH13-203ENST00000431540 CTDSPL2Q05D32 466 aa9.7□□□□□ -0.86
CDH13-203ENST00000431540 HDAC1Q13547 482 aaPredicted RBP9.7□□□□□ -0.86
CDH13-203ENST00000431540 LAMC2Q13753 1193 aa9.7□□□□□ -0.86
CDH13-203ENST00000431540 DGKDQ16760 1214 aa9.7□□□□□ -0.86
CDH13-203ENST00000431540 CCDC96Q2M329 555 aa9.7□□□□□ -0.86
CDH13-203ENST00000431540 PUS10Q3MIT2 529 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms