RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 ENGASEQ8NFI3 743 aa20.66■□□□□ 0.9
HMGN1-206ENST00000431390 ARMC5Q96C12 935 aa20.66■□□□□ 0.9
HMGN1-206ENST00000431390 HPSEQ9Y251 543 aa20.66■□□□□ 0.9
HMGN1-206ENST00000431390 A0A1B0GVL5 298 aa20.65■□□□□ 0.9
HMGN1-206ENST00000431390 BTBD19C9JJ37 291 aa20.65■□□□□ 0.9
HMGN1-206ENST00000431390 NR1I2O75469 434 aa20.65■□□□□ 0.9
HMGN1-206ENST00000431390 COPB2P35606 906 aa20.65■□□□□ 0.9
HMGN1-206ENST00000431390 RPS6P62753 249 aaKnown RBP20.65■□□□□ 0.9
HMGN1-206ENST00000431390 GRIN1Q05586 938 aa20.65■□□□□ 0.9
HMGN1-206ENST00000431390 SYTL5Q8TDW5 730 aaPredicted RBP20.65■□□□□ 0.9
HMGN1-206ENST00000431390 SPATC1LQ9H0A9 340 aa20.65■□□□□ 0.9
HMGN1-206ENST00000431390 CSRNP2Q9H175 543 aa20.65■□□□□ 0.9
HMGN1-206ENST00000431390 DACT1Q9NYF0 836 aa20.65■□□□□ 0.9
HMGN1-206ENST00000431390 FBXO40Q9UH90 709 aa20.65■□□□□ 0.9
HMGN1-206ENST00000431390 DDX25Q9UHL0 483 aaKnown RBP20.65■□□□□ 0.9
HMGN1-206ENST00000431390 VWA3AA6NCI4 1184 aa20.64■□□□□ 0.9
HMGN1-206ENST00000431390 CNMDO75829 334 aa20.64■□□□□ 0.9
HMGN1-206ENST00000431390 PFKFB1P16118 471 aa20.64■□□□□ 0.9
HMGN1-206ENST00000431390 LONP1P36776 959 aaKnown RBP20.64■□□□□ 0.9
HMGN1-206ENST00000431390 SNW1Q13573 536 aaKnown RBP20.64■□□□□ 0.9
HMGN1-206ENST00000431390 FRMPD4Q14CM0 1322 aa20.64■□□□□ 0.9
HMGN1-206ENST00000431390 CALCRLQ16602 461 aa20.64■□□□□ 0.9
HMGN1-206ENST00000431390 DTHD1Q6ZMT9 781 aa20.64■□□□□ 0.9
HMGN1-206ENST00000431390 POTEDQ86YR6 584 aa20.64■□□□□ 0.9
HMGN1-206ENST00000431390 FMR1NBQ8N0W7 255 aaPredicted RBP20.64■□□□□ 0.9
HMGN1-206ENST00000431390 RPTORQ8N122 1335 aa20.64■□□□□ 0.9
HMGN1-206ENST00000431390 MTMR9Q96QG7 549 aa20.64■□□□□ 0.9
HMGN1-206ENST00000431390 FAM13BQ9NYF5 915 aa20.64■□□□□ 0.9
HMGN1-206ENST00000431390 PDHXO00330 501 aa20.63■□□□□ 0.89
HMGN1-206ENST00000431390 SLC37A4O43826 429 aa20.63■□□□□ 0.89
HMGN1-206ENST00000431390 SLC25A27O95847 323 aa20.63■□□□□ 0.89
HMGN1-206ENST00000431390 NDUFA8P51970 172 aa20.63■□□□□ 0.89
HMGN1-206ENST00000431390 IL17AQ16552 155 aa20.63■□□□□ 0.89
HMGN1-206ENST00000431390 Q4G0T1 1027 aa20.63■□□□□ 0.89
HMGN1-206ENST00000431390 NSMFQ6X4W1 530 aa20.63■□□□□ 0.89
HMGN1-206ENST00000431390 GZF1Q9H116 711 aaPredicted RBP20.63■□□□□ 0.89
HMGN1-206ENST00000431390 COL20A1Q9P218 1284 aa20.63■□□□□ 0.89
HMGN1-206ENST00000431390 SLC30A10Q6XR72 485 aa20.63■□□□□ 0.89
HMGN1-206ENST00000431390 PAGR1Q9BTK6 254 aa20.63■□□□□ 0.89
HMGN1-206ENST00000431390 RBPJLQ9UBG7 517 aa20.63■□□□□ 0.89
HMGN1-206ENST00000431390 LETM1O95202 739 aaPredicted RBP20.62■□□□□ 0.89
HMGN1-206ENST00000431390 BAATQ14032 418 aaPredicted RBP20.62■□□□□ 0.89
HMGN1-206ENST00000431390 TAF1CQ15572 869 aaPredicted RBP20.62■□□□□ 0.89
HMGN1-206ENST00000431390 ZSCAN23Q3MJ62 389 aa20.62■□□□□ 0.89
HMGN1-206ENST00000431390 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.62■□□□□ 0.89
HMGN1-206ENST00000431390 NUP62CLQ9H1M0 184 aa20.62■□□□□ 0.89
HMGN1-206ENST00000431390 CLSTN2Q9H4D0 955 aa20.62■□□□□ 0.89
HMGN1-206ENST00000431390 TBX3O15119 743 aa20.61■□□□□ 0.89
HMGN1-206ENST00000431390 KINO60870 393 aaKnown RBP20.61■□□□□ 0.89
HMGN1-206ENST00000431390 ZNF76P36508 570 aa20.61■□□□□ 0.89
HMGN1-206ENST00000431390 SYKP43405 635 aa20.61■□□□□ 0.89
HMGN1-206ENST00000431390 GCLCP48506 637 aaPredicted RBP20.61■□□□□ 0.89
HMGN1-206ENST00000431390 SPECC1Q5M775 1068 aa20.61■□□□□ 0.89
HMGN1-206ENST00000431390 AK8Q96MA6 479 aa20.61■□□□□ 0.89
HMGN1-206ENST00000431390 MOV10L1Q9BXT6 1211 aaKnown RBP20.61■□□□□ 0.89
HMGN1-206ENST00000431390 TXNRD2Q9NNW7 524 aa20.61■□□□□ 0.89
HMGN1-206ENST00000431390 ZCCHC17Q9NP64 241 aaKnown RBP20.61■□□□□ 0.89
HMGN1-206ENST00000431390 A1CFQ9NQ94 594 aaKnown RBP20.61■□□□□ 0.89
HMGN1-206ENST00000431390 CYP39A1Q9NYL5 469 aa20.61■□□□□ 0.89
HMGN1-206ENST00000431390 KCNH3Q9ULD8 1083 aa20.61■□□□□ 0.89
HMGN1-206ENST00000431390 PFASO15067 1338 aa20.6■□□□□ 0.89
HMGN1-206ENST00000431390 FXR2P51116 673 aaKnown RBP eCLIP20.6■□□□□ 0.894e-20■□□□□ 8.5
HMGN1-206ENST00000431390 FAM43AQ8N2R8 423 aa20.6■□□□□ 0.89
HMGN1-206ENST00000431390 SMCR8Q8TEV9 937 aaPredicted RBP20.6■□□□□ 0.89
HMGN1-206ENST00000431390 ZNF333Q96JL9 665 aa20.6■□□□□ 0.89
HMGN1-206ENST00000431390 TIGD1Q96MW7 591 aa20.6■□□□□ 0.89
HMGN1-206ENST00000431390 PARK7Q99497 189 aaKnown RBP20.6■□□□□ 0.89
HMGN1-206ENST00000431390 KCNMB3Q9NPA1 279 aa20.6■□□□□ 0.89
HMGN1-206ENST00000431390 PTCH2Q9Y6C5 1203 aa20.6■□□□□ 0.89
HMGN1-206ENST00000431390 LCTP09848 1927 aa20.59■□□□□ 0.89
HMGN1-206ENST00000431390 FAM86B1E9PN63 330 aa20.59■□□□□ 0.89
HMGN1-206ENST00000431390 ZNF202O95125 648 aa20.59■□□□□ 0.89
HMGN1-206ENST00000431390 FAM86B2P0C5J1 330 aa20.59■□□□□ 0.89
HMGN1-206ENST00000431390 CYP2C8P10632 490 aa20.59■□□□□ 0.89
HMGN1-206ENST00000431390 ERVK-9P63128 1117 aa20.59■□□□□ 0.89
HMGN1-206ENST00000431390 ERVK-24P63145 666 aa20.59■□□□□ 0.89
HMGN1-206ENST00000431390 TMEM266Q2M3C6 531 aa20.59■□□□□ 0.89
HMGN1-206ENST00000431390 PCNX4Q63HM2 1172 aa20.59■□□□□ 0.89
HMGN1-206ENST00000431390 SHCBP1Q8NEM2 672 aa20.59■□□□□ 0.89
HMGN1-206ENST00000431390 SYMPKQ92797 1274 aaKnown RBP20.59■□□□□ 0.89
HMGN1-206ENST00000431390 HAS1Q92839 578 aa20.59■□□□□ 0.89
HMGN1-206ENST00000431390 LENG9Q96B70 501 aa20.59■□□□□ 0.89
HMGN1-206ENST00000431390 TAAR1Q96RJ0 339 aa20.59■□□□□ 0.89
HMGN1-206ENST00000431390 TMEM106CQ9BVX2 250 aa20.59■□□□□ 0.89
HMGN1-206ENST00000431390 ZFYVE28Q9HCC9 887 aa20.59■□□□□ 0.89
HMGN1-206ENST00000431390 IGLV3-22A0A075B6J6 115 aa20.59■□□□□ 0.89
HMGN1-206ENST00000431390 TXKP42681 527 aa20.59■□□□□ 0.89
HMGN1-206ENST00000431390 SLC9C1Q4G0N8 1177 aa20.59■□□□□ 0.89
HMGN1-206ENST00000431390 PRR16Q569H4 304 aa20.59■□□□□ 0.89
HMGN1-206ENST00000431390 XRRA1Q6P2D8 792 aa20.59■□□□□ 0.89
HMGN1-206ENST00000431390 NCAPG2Q86XI2 1143 aa20.59■□□□□ 0.89
HMGN1-206ENST00000431390 SLFN12Q8IYM2 578 aa20.59■□□□□ 0.89
HMGN1-206ENST00000431390 IGSF22Q8N9C0 903 aa20.59■□□□□ 0.89
HMGN1-206ENST00000431390 EPSTI1Q96J88 318 aa20.59■□□□□ 0.89
HMGN1-206ENST00000431390 FAM20AQ96MK3 541 aa20.59■□□□□ 0.89
HMGN1-206ENST00000431390 RMDN3Q96TC7 470 aa20.59■□□□□ 0.89
HMGN1-206ENST00000431390 PYM1Q9BRP8 204 aaKnown RBP20.59■□□□□ 0.89
HMGN1-206ENST00000431390 RAB34Q9BZG1 259 aa20.59■□□□□ 0.89
HMGN1-206ENST00000431390 PXMP2Q9NR77 195 aa20.59■□□□□ 0.89
HMGN1-206ENST00000431390 CTAGE5O15320 804 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms