RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 MILR1Q7Z6M3 343 aa7.58□□□□□ -1.2
PTPN4-204ENST00000431283 NPLOC4Q8TAT6 608 aa7.58□□□□□ -1.2
PTPN4-204ENST00000431283 DPF3Q92784 378 aa7.58□□□□□ -1.2
PTPN4-204ENST00000431283 CHAMP1Q96JM3 812 aa7.58□□□□□ -1.2
PTPN4-204ENST00000431283 SLC6A11P48066 632 aa7.57□□□□□ -1.2
PTPN4-204ENST00000431283 SMAD4Q13485 552 aaKnown RBP7.57□□□□□ -1.2
PTPN4-204ENST00000431283 CHRNA2Q15822 529 aa7.57□□□□□ -1.2
PTPN4-204ENST00000431283 SKOR2Q2VWA4 1001 aaPredicted RBP7.57□□□□□ -1.2
PTPN4-204ENST00000431283 EEPD1Q7L9B9 569 aa7.57□□□□□ -1.2
PTPN4-204ENST00000431283 ZNF227Q86WZ6 799 aa7.57□□□□□ -1.2
PTPN4-204ENST00000431283 NOX5Q96PH1 765 aa7.57□□□□□ -1.2
PTPN4-204ENST00000431283 NGRNQ9NPE2 291 aaKnown RBP7.57□□□□□ -1.2
PTPN4-204ENST00000431283 PALD1Q9ULE6 856 aa7.57□□□□□ -1.2
PTPN4-204ENST00000431283 B2RBV5 119 aa7.56□□□□□ -1.2
PTPN4-204ENST00000431283 FPR2P25090 351 aa7.56□□□□□ -1.2
PTPN4-204ENST00000431283 ARID5AQ03989 594 aa7.56□□□□□ -1.2
PTPN4-204ENST00000431283 RTP5Q14D33 572 aa7.56□□□□□ -1.2
PTPN4-204ENST00000431283 RIOX2Q8IUF8 465 aa7.56□□□□□ -1.2
PTPN4-204ENST00000431283 PPIL6Q8IXY8 311 aa7.56□□□□□ -1.2
PTPN4-204ENST00000431283 BORCS6Q96GS4 357 aa7.56□□□□□ -1.2
PTPN4-204ENST00000431283 C8BP07358 591 aa7.55□□□□□ -1.2
PTPN4-204ENST00000431283 LTBRP36941 435 aa7.55□□□□□ -1.2
PTPN4-204ENST00000431283 ETFBP38117 255 aa7.55□□□□□ -1.2
PTPN4-204ENST00000431283 BCL6P41182 706 aa7.55□□□□□ -1.2
PTPN4-204ENST00000431283 ZFYVE27Q5T4F4 411 aa7.55□□□□□ -1.2
PTPN4-204ENST00000431283 DBX2Q6ZNG2 339 aa7.55□□□□□ -1.2
PTPN4-204ENST00000431283 TTLL6Q8N841 843 aa7.55□□□□□ -1.2
PTPN4-204ENST00000431283 DDX1Q92499 740 aaKnown RBP7.55□□□□□ -1.2
PTPN4-204ENST00000431283 EPN3Q9H201 632 aa7.55□□□□□ -1.2
PTPN4-204ENST00000431283 SGSM2O43147 1006 aa7.54□□□□□ -1.2
PTPN4-204ENST00000431283 TBX1O43435 398 aa7.54□□□□□ -1.2
PTPN4-204ENST00000431283 PRICKLE3O43900 615 aaPredicted RBP7.54□□□□□ -1.2
PTPN4-204ENST00000431283 DLX2Q07687 328 aaPredicted RBP7.54□□□□□ -1.2
PTPN4-204ENST00000431283 ACBD5Q5T8D3 534 aaPredicted RBP7.54□□□□□ -1.2
PTPN4-204ENST00000431283 FERMT3Q86UX7 667 aa7.54□□□□□ -1.2
PTPN4-204ENST00000431283 FAM124AQ86V42 546 aa7.54□□□□□ -1.2
PTPN4-204ENST00000431283 MIB1Q86YT6 1006 aa7.54□□□□□ -1.2
PTPN4-204ENST00000431283 LINC00482Q8N8I6 264 aa7.54□□□□□ -1.2
PTPN4-204ENST00000431283 KYQ8NBH2 561 aa7.54□□□□□ -1.2
PTPN4-204ENST00000431283 GORASP1Q9BQQ3 440 aa7.54□□□□□ -1.2
PTPN4-204ENST00000431283 C11orf84Q9BUA3 381 aaPredicted RBP7.54□□□□□ -1.2
PTPN4-204ENST00000431283 PCDHA2Q9Y5H9 948 aa7.54□□□□□ -1.2
PTPN4-204ENST00000431283 K7ESM1 405 aa7.53□□□□□ -1.2
PTPN4-204ENST00000431283 NOBOXO60393 691 aa7.53□□□□□ -1.2
PTPN4-204ENST00000431283 SCG5P05408 212 aa7.53□□□□□ -1.2
PTPN4-204ENST00000431283 CNR2P34972 360 aa7.53□□□□□ -1.2
PTPN4-204ENST00000431283 NKX3-2P78367 333 aa7.53□□□□□ -1.2
PTPN4-204ENST00000431283 SPATS1Q496A3 300 aa7.53□□□□□ -1.2
PTPN4-204ENST00000431283 SPATA6Q9NWH7 488 aaPredicted RBP7.53□□□□□ -1.2
PTPN4-204ENST00000431283 X6R8D5 127 aa7.53□□□□□ -1.2
PTPN4-204ENST00000431283 H7BY64 318 aa7.52□□□□□ -1.21
PTPN4-204ENST00000431283 DGKIO75912 1065 aa7.52□□□□□ -1.21
PTPN4-204ENST00000431283 ADRB1P08588 477 aa7.52□□□□□ -1.21
PTPN4-204ENST00000431283 DNAJA1P31689 397 aaKnown RBP7.52□□□□□ -1.21
PTPN4-204ENST00000431283 KIAA2012Q0VF49 1180 aa7.52□□□□□ -1.21
PTPN4-204ENST00000431283 LSAMPQ13449 338 aa7.52□□□□□ -1.21
PTPN4-204ENST00000431283 PRSS53Q2L4Q9 553 aa7.52□□□□□ -1.21
PTPN4-204ENST00000431283 ZNF761Q86XN6 746 aaPredicted RBP7.52□□□□□ -1.21
PTPN4-204ENST00000431283 CCDC103Q8IW40 242 aa7.52□□□□□ -1.21
PTPN4-204ENST00000431283 FAM126BQ8IXS8 530 aa7.52□□□□□ -1.21
PTPN4-204ENST00000431283 ADAMTS17Q8TE56 1095 aa7.52□□□□□ -1.21
PTPN4-204ENST00000431283 ZNF408Q9H9D4 720 aa7.52□□□□□ -1.21
PTPN4-204ENST00000431283 CLDND1Q9NY35 253 aa7.52□□□□□ -1.21
PTPN4-204ENST00000431283 TMEFF2Q9UIK5 374 aaPredicted RBP7.52□□□□□ -1.21
PTPN4-204ENST00000431283 HGSO14964 777 aaPredicted RBP7.51□□□□□ -1.21
PTPN4-204ENST00000431283 MAFKO60675 156 aa7.51□□□□□ -1.21
PTPN4-204ENST00000431283 RPL13P26373 211 aaKnown RBP7.51□□□□□ -1.21
PTPN4-204ENST00000431283 THBS2P35442 1172 aa7.51□□□□□ -1.21
PTPN4-204ENST00000431283 GFRA1P56159 465 aa7.51□□□□□ -1.21
PTPN4-204ENST00000431283 LCE5AQ5TCM9 118 aa7.51□□□□□ -1.21
PTPN4-204ENST00000431283 STEAP3Q658P3 488 aa7.51□□□□□ -1.21
PTPN4-204ENST00000431283 BORAQ6PGQ7 559 aa7.51□□□□□ -1.21
PTPN4-204ENST00000431283 FAM26EQ8N5C1 309 aa7.51□□□□□ -1.21
PTPN4-204ENST00000431283 TMEM145Q8NBT3 493 aa7.51□□□□□ -1.21
PTPN4-204ENST00000431283 RCBTB1Q8NDN9 531 aa7.51□□□□□ -1.21
PTPN4-204ENST00000431283 KCTD13Q8WZ19 329 aa7.51□□□□□ -1.21
PTPN4-204ENST00000431283 LNPKQ9C0E8 428 aa7.51□□□□□ -1.21
PTPN4-204ENST00000431283 CNOT11Q9UKZ1 510 aaKnown RBP7.51□□□□□ -1.21
PTPN4-204ENST00000431283 GJB6O95452 261 aa7.5□□□□□ -1.21
PTPN4-204ENST00000431283 STAT5AP42229 794 aa7.5□□□□□ -1.21
PTPN4-204ENST00000431283 CYP4F3Q08477 520 aa7.5□□□□□ -1.21
PTPN4-204ENST00000431283 SF1Q15637 639 aaKnown RBP7.5□□□□□ -1.21
PTPN4-204ENST00000431283 ZNF827Q17R98 1081 aa7.5□□□□□ -1.21
PTPN4-204ENST00000431283 RGL3Q3MIN7 710 aa7.5□□□□□ -1.21
PTPN4-204ENST00000431283 MRM1Q6IN84 353 aaKnown RBP7.5□□□□□ -1.21
PTPN4-204ENST00000431283 STK32CQ86UX6 486 aa7.5□□□□□ -1.21
PTPN4-204ENST00000431283 NLRP10Q86W26 655 aa7.5□□□□□ -1.21
PTPN4-204ENST00000431283 Q8N1Y9 231 aa7.5□□□□□ -1.21
PTPN4-204ENST00000431283 MICAL1Q8TDZ2 1067 aa7.5□□□□□ -1.21
PTPN4-204ENST00000431283 ZNF652Q9Y2D9 606 aa7.5□□□□□ -1.21
PTPN4-204ENST00000431283 PCDHB4Q9Y5E5 795 aa7.5□□□□□ -1.21
PTPN4-204ENST00000431283 ADAMTS20P59510 1910 aa7.49□□□□□ -1.21
PTPN4-204ENST00000431283 FGRP09769 529 aa7.49□□□□□ -1.21
PTPN4-204ENST00000431283 ITGA1P56199 1179 aa7.49□□□□□ -1.21
PTPN4-204ENST00000431283 FAM26FQ5R3K3 315 aa7.49□□□□□ -1.21
PTPN4-204ENST00000431283 PRAMEF18Q5VWM3 479 aa7.49□□□□□ -1.21
PTPN4-204ENST00000431283 KREMEN2Q8NCW0 462 aa7.49□□□□□ -1.21
PTPN4-204ENST00000431283 TOE1Q96GM8 510 aaKnown RBP7.49□□□□□ -1.21
PTPN4-204ENST00000431283 KRTAP4-2Q9BYR5 136 aa7.49□□□□□ -1.21
PTPN4-204ENST00000431283 EPB41L1Q9H4G0 881 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms