RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 CSRNP1Q96S65 589 aa15.59■□□□□ 0.09
HOXC4-202ENST00000430889 TUBGCP2Q9BSJ2 902 aa15.59■□□□□ 0.09
HOXC4-202ENST00000430889 CCDC94Q9BW85 323 aaPredicted RBP15.59■□□□□ 0.09
HOXC4-202ENST00000430889 LRRC27Q9C0I9 530 aa15.59■□□□□ 0.09
HOXC4-202ENST00000430889 PDGFDQ9GZP0 370 aaPredicted RBP15.59■□□□□ 0.09
HOXC4-202ENST00000430889 CAPN11Q9UMQ6 739 aa15.59■□□□□ 0.09
HOXC4-202ENST00000430889 KDM3AQ9Y4C1 1321 aa15.59■□□□□ 0.09
HOXC4-202ENST00000430889 A0A0U1RQJ8 604 aa15.58■□□□□ 0.08
HOXC4-202ENST00000430889 TTC26A0AVF1 554 aa15.58■□□□□ 0.08
HOXC4-202ENST00000430889 PSMD14O00487 310 aa15.58■□□□□ 0.08
HOXC4-202ENST00000430889 BMP3P12645 472 aa15.58■□□□□ 0.08
HOXC4-202ENST00000430889 CIITAP33076 1130 aa15.58■□□□□ 0.08
HOXC4-202ENST00000430889 SREBF1P36956 1147 aa15.58■□□□□ 0.08
HOXC4-202ENST00000430889 ARHGAP4P98171 946 aa15.58■□□□□ 0.08
HOXC4-202ENST00000430889 PSMD2Q13200 908 aa15.58■□□□□ 0.08
HOXC4-202ENST00000430889 SPDYE2Q495Y8 402 aa15.58■□□□□ 0.08
HOXC4-202ENST00000430889 Q4G0T1 1027 aa15.58■□□□□ 0.08
HOXC4-202ENST00000430889 FBXO11Q86XK2 927 aa15.58■□□□□ 0.08
HOXC4-202ENST00000430889 TEX2Q8IWB9 1127 aa15.58■□□□□ 0.08
HOXC4-202ENST00000430889 FAM114A1Q8IWE2 563 aa15.58■□□□□ 0.08
HOXC4-202ENST00000430889 RTKN2Q8IZC4 609 aa15.58■□□□□ 0.08
HOXC4-202ENST00000430889 TTLL6Q8N841 843 aa15.58■□□□□ 0.08
HOXC4-202ENST00000430889 FAM151AQ8WW52 585 aa15.58■□□□□ 0.08
HOXC4-202ENST00000430889 ATRIPQ8WXE1 791 aa15.58■□□□□ 0.08
HOXC4-202ENST00000430889 DDX12PQ92771 950 aa15.58■□□□□ 0.08
HOXC4-202ENST00000430889 SLC39A2Q9NP94 309 aa15.58■□□□□ 0.08
HOXC4-202ENST00000430889 MAGEC2Q9UBF1 373 aaPredicted RBP15.58■□□□□ 0.08
HOXC4-202ENST00000430889 ZNF70Q9UC06 446 aaPredicted RBP15.58■□□□□ 0.08
HOXC4-202ENST00000430889 PCDHA12Q9UN75 941 aa15.58■□□□□ 0.08
HOXC4-202ENST00000430889 ATAD5Q96QE3 1844 aa15.58■□□□□ 0.08
HOXC4-202ENST00000430889 ABCB11O95342 1321 aa15.58■□□□□ 0.08
HOXC4-202ENST00000430889 BRCA1P38398 1863 aaKnown RBP15.57■□□□□ 0.08
HOXC4-202ENST00000430889 TBX3O15119 743 aa15.57■□□□□ 0.08
HOXC4-202ENST00000430889 NKRFO15226 690 aaKnown RBP eCLIP15.57■□□□□ 0.08
HOXC4-202ENST00000430889 KRT9P35527 623 aa15.57■□□□□ 0.08
HOXC4-202ENST00000430889 MAP3K9P80192 1104 aa15.57■□□□□ 0.08
HOXC4-202ENST00000430889 MEA1Q16626 185 aa15.57■□□□□ 0.08
HOXC4-202ENST00000430889 ZCWPW2Q504Y3 356 aa15.57■□□□□ 0.08
HOXC4-202ENST00000430889 KIAA1755Q5JYT7 1200 aa15.57■□□□□ 0.08
HOXC4-202ENST00000430889 CYP26C1Q6V0L0 522 aa15.57■□□□□ 0.08
HOXC4-202ENST00000430889 MTMR14Q8NCE2 650 aa15.57■□□□□ 0.08
HOXC4-202ENST00000430889 ERGIC2Q96RQ1 377 aa15.57■□□□□ 0.08
HOXC4-202ENST00000430889 NT5C3AQ9H0P0 336 aa15.57■□□□□ 0.08
HOXC4-202ENST00000430889 VPS33BQ9H267 617 aa15.57■□□□□ 0.08
HOXC4-202ENST00000430889 CGNQ9P2M7 1197 aaKnown RBP15.57■□□□□ 0.08
HOXC4-202ENST00000430889 PGAP2Q9UHJ9 254 aa15.57■□□□□ 0.08
HOXC4-202ENST00000430889 FER1L6Q2WGJ9 1857 aa15.57■□□□□ 0.08
HOXC4-202ENST00000430889 B4DLN1 442 aa15.57■□□□□ 0.08
HOXC4-202ENST00000430889 PIK3CDO00329 1044 aa15.57■□□□□ 0.08
HOXC4-202ENST00000430889 FOSP01100 380 aaPredicted RBP15.57■□□□□ 0.08
HOXC4-202ENST00000430889 ARHGAP25P42331 645 aa15.57■□□□□ 0.08
HOXC4-202ENST00000430889 SNAP25P60880 206 aa15.57■□□□□ 0.08
HOXC4-202ENST00000430889 GNG11P61952 73 aa15.57■□□□□ 0.08
HOXC4-202ENST00000430889 ELF2Q15723 593 aa15.57■□□□□ 0.08
HOXC4-202ENST00000430889 FIGNQ5HY92 759 aa15.57■□□□□ 0.08
HOXC4-202ENST00000430889 FKBP1CQ5VVH2 108 aa15.57■□□□□ 0.08
HOXC4-202ENST00000430889 WDR59Q6PJI9 974 aa15.57■□□□□ 0.08
HOXC4-202ENST00000430889 LRRC55Q6ZSA7 311 aa15.57■□□□□ 0.08
HOXC4-202ENST00000430889 DYMQ7RTS9 669 aa15.57■□□□□ 0.08
HOXC4-202ENST00000430889 RETREG2Q8NC44 543 aa15.57■□□□□ 0.08
HOXC4-202ENST00000430889 ZBED3Q96IU2 234 aaPredicted RBP15.57■□□□□ 0.08
HOXC4-202ENST00000430889 TMX2Q9Y320 296 aa15.57■□□□□ 0.08
HOXC4-202ENST00000430889 PCDHA2Q9Y5H9 948 aa15.57■□□□□ 0.08
HOXC4-202ENST00000430889 FRMD3A2A2Y4 597 aa15.56■□□□□ 0.08
HOXC4-202ENST00000430889 TADA3O75528 432 aa15.56■□□□□ 0.08
HOXC4-202ENST00000430889 CYP3A4P08684 503 aa15.56■□□□□ 0.08
HOXC4-202ENST00000430889 LRRC63Q05C16 580 aa15.56■□□□□ 0.08
HOXC4-202ENST00000430889 COASYQ13057 564 aa15.56■□□□□ 0.08
HOXC4-202ENST00000430889 SLFN12Q8IYM2 578 aa15.56■□□□□ 0.08
HOXC4-202ENST00000430889 ACRBPQ8NEB7 543 aa15.56■□□□□ 0.08
HOXC4-202ENST00000430889 OR8K1Q8NGG5 319 aa15.56■□□□□ 0.08
HOXC4-202ENST00000430889 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.56■□□□□ 0.08
HOXC4-202ENST00000430889 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.56■□□□□ 0.08
HOXC4-202ENST00000430889 PRR12Q9ULL5 1215 aa15.56■□□□□ 0.08
HOXC4-202ENST00000430889 REXO2Q9Y3B8 237 aaKnown RBP15.56■□□□□ 0.08
HOXC4-202ENST00000430889 MRFAP1Q9Y605 127 aa15.56■□□□□ 0.08
HOXC4-202ENST00000430889 V9GYY5 206 aaPredicted RBP15.56■□□□□ 0.08
HOXC4-202ENST00000430889 TCP10L2B9ZVM9 353 aa15.55■□□□□ 0.08
HOXC4-202ENST00000430889 TBC1D12O60347 775 aa15.55■□□□□ 0.08
HOXC4-202ENST00000430889 CASQ1P31415 396 aa15.55■□□□□ 0.08
HOXC4-202ENST00000430889 ECE1P42892 770 aa15.55■□□□□ 0.08
HOXC4-202ENST00000430889 GLIS3Q8NEA6 775 aa15.55■□□□□ 0.08
HOXC4-202ENST00000430889 ACER1Q8TDN7 264 aa15.55■□□□□ 0.08
HOXC4-202ENST00000430889 CHP1Q99653 195 aa15.55■□□□□ 0.08
HOXC4-202ENST00000430889 TMOD2Q9NZR1 351 aa15.55■□□□□ 0.08
HOXC4-202ENST00000430889 A0A1W2PQJ5 194 aa15.54■□□□□ 0.08
HOXC4-202ENST00000430889 POTEB3A0JP26 581 aa15.54■□□□□ 0.08
HOXC4-202ENST00000430889 CLRN2A0PK11 232 aa15.54■□□□□ 0.08
HOXC4-202ENST00000430889 POTECB2RU33 542 aa15.54■□□□□ 0.08
HOXC4-202ENST00000430889 RAD21O60216 631 aa15.54■□□□□ 0.08
HOXC4-202ENST00000430889 MED24O75448 989 aa15.54■□□□□ 0.08
HOXC4-202ENST00000430889 RAD17O75943 681 aa15.54■□□□□ 0.08
HOXC4-202ENST00000430889 URI1O94763 535 aaPredicted RBP15.54■□□□□ 0.08
HOXC4-202ENST00000430889 H2AFXP16104 143 aaPredicted RBP15.54■□□□□ 0.08
HOXC4-202ENST00000430889 TAL1P17542 331 aaPredicted RBP15.54■□□□□ 0.08
HOXC4-202ENST00000430889 MAP3K10Q02779 954 aa15.54■□□□□ 0.08
HOXC4-202ENST00000430889 POTEBQ6S5H4 581 aa15.54■□□□□ 0.08
HOXC4-202ENST00000430889 ZNF397Q8NF99 534 aaPredicted RBP15.54■□□□□ 0.08
HOXC4-202ENST00000430889 NUP58Q9BVL2 599 aa15.54■□□□□ 0.08
HOXC4-202ENST00000430889 IRX2Q9BZI1 471 aaPredicted RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms