RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 A0A1W2PQC6 194 aa8□□□□□ -1.13
COL28A1-202ENST00000430711 SMCO2A6NFE2 343 aa8□□□□□ -1.13
COL28A1-202ENST00000430711 BMP15O95972 392 aa8□□□□□ -1.13
COL28A1-202ENST00000430711 APBA3O96018 575 aa8□□□□□ -1.13
COL28A1-202ENST00000430711 OR52Z1P0C646 297 aa8□□□□□ -1.13
COL28A1-202ENST00000430711 FAM153BP0C7A2 387 aa8□□□□□ -1.13
COL28A1-202ENST00000430711 CCNE1P24864 410 aa8□□□□□ -1.13
COL28A1-202ENST00000430711 RNASE9P60153 205 aaKnown RBP8□□□□□ -1.13
COL28A1-202ENST00000430711 KCNMA1Q12791 1236 aa8□□□□□ -1.13
COL28A1-202ENST00000430711 KCNB1Q14721 858 aa8□□□□□ -1.13
COL28A1-202ENST00000430711 ENOX2Q16206 610 aaKnown RBP8□□□□□ -1.13
COL28A1-202ENST00000430711 FAM153CQ494X1 144 aa8□□□□□ -1.13
COL28A1-202ENST00000430711 CT47A1Q5JQC4 288 aaPredicted RBP8□□□□□ -1.13
COL28A1-202ENST00000430711 DCAF8Q5TAQ9 597 aa8□□□□□ -1.13
COL28A1-202ENST00000430711 TTBK2Q6IQ55 1244 aa8□□□□□ -1.13
COL28A1-202ENST00000430711 NBPF5PQ86XG9 351 aaPredicted RBP8□□□□□ -1.13
COL28A1-202ENST00000430711 SH2D3CQ8N5H7 860 aa8□□□□□ -1.13
COL28A1-202ENST00000430711 BAP1Q92560 729 aa8□□□□□ -1.13
COL28A1-202ENST00000430711 ARL8AQ96BM9 186 aa8□□□□□ -1.13
COL28A1-202ENST00000430711 CRACR2AQ9BSW2 395 aa8□□□□□ -1.13
COL28A1-202ENST00000430711 NLRC4Q9NPP4 1024 aa8□□□□□ -1.13
COL28A1-202ENST00000430711 JADE2Q9NQC1 790 aa8□□□□□ -1.13
COL28A1-202ENST00000430711 FAM153AQ9UHL3 310 aa8□□□□□ -1.13
COL28A1-202ENST00000430711 SMCHD1A6NHR9 2005 aa7.99□□□□□ -1.13
COL28A1-202ENST00000430711 PSMA7O14818 248 aa7.99□□□□□ -1.13
COL28A1-202ENST00000430711 GNPATO15228 680 aa7.99□□□□□ -1.13
COL28A1-202ENST00000430711 NOL4O94818 638 aa7.99□□□□□ -1.13
COL28A1-202ENST00000430711 EEF1GP26641 437 aaKnown RBP7.99□□□□□ -1.13
COL28A1-202ENST00000430711 POLD1P28340 1107 aa7.99□□□□□ -1.13
COL28A1-202ENST00000430711 CDK8P49336 464 aa7.99□□□□□ -1.13
COL28A1-202ENST00000430711 SPAG1Q07617 926 aa7.99□□□□□ -1.13
COL28A1-202ENST00000430711 TAF3Q5VWG9 929 aa7.99□□□□□ -1.13
COL28A1-202ENST00000430711 HGSNATQ68CP4 663 aa7.99□□□□□ -1.13
COL28A1-202ENST00000430711 LRRC55Q6ZSA7 311 aa7.99□□□□□ -1.13
COL28A1-202ENST00000430711 GOLGA5Q8TBA6 731 aa7.99□□□□□ -1.13
COL28A1-202ENST00000430711 P2RX7Q99572 595 aaKnown RBP7.99□□□□□ -1.13
COL28A1-202ENST00000430711 ZMYND12Q9H0C1 365 aa7.99□□□□□ -1.13
COL28A1-202ENST00000430711 HAUS4Q9H6D7 363 aa7.99□□□□□ -1.13
COL28A1-202ENST00000430711 RBM12Q9NTZ6 932 aaKnown RBP7.99□□□□□ -1.13
COL28A1-202ENST00000430711 RMND1Q9NWS8 449 aa7.99□□□□□ -1.13
COL28A1-202ENST00000430711 RSPH14Q9UHP6 348 aa7.99□□□□□ -1.13
COL28A1-202ENST00000430711 PCDHAC2Q9Y5I4 1007 aa7.99□□□□□ -1.13
COL28A1-202ENST00000430711 FAM196BA6NMK8 535 aa7.98□□□□□ -1.13
COL28A1-202ENST00000430711 SLC16A2P36021 539 aa7.98□□□□□ -1.13
COL28A1-202ENST00000430711 BTDP43251 543 aa7.98□□□□□ -1.13
COL28A1-202ENST00000430711 DNM2P50570 870 aa7.98□□□□□ -1.13
COL28A1-202ENST00000430711 KIF11P52732 1056 aa7.98□□□□□ -1.13
COL28A1-202ENST00000430711 CCDC96Q2M329 555 aa7.98□□□□□ -1.13
COL28A1-202ENST00000430711 HAUS3Q68CZ6 603 aa7.98□□□□□ -1.13
COL28A1-202ENST00000430711 CCNI2Q6ZMN8 369 aaPredicted RBP7.98□□□□□ -1.13
COL28A1-202ENST00000430711 DGKHQ86XP1 1220 aa7.98□□□□□ -1.13
COL28A1-202ENST00000430711 ZSCAN29Q8IWY8 852 aaPredicted RBP7.98□□□□□ -1.13
COL28A1-202ENST00000430711 AENQ8WTP8 325 aaKnown RBP7.98□□□□□ -1.13
COL28A1-202ENST00000430711 EYA3Q99504 573 aa7.98□□□□□ -1.13
COL28A1-202ENST00000430711 FHDC1Q9C0D6 1143 aaPredicted RBP7.98□□□□□ -1.13
COL28A1-202ENST00000430711 TSPYL2Q9H2G4 693 aaPredicted RBP7.98□□□□□ -1.13
COL28A1-202ENST00000430711 NHSQ6T4R5 1651 aa7.98□□□□□ -1.13
COL28A1-202ENST00000430711 EIF3CLB5ME19 914 aaKnown RBP7.98□□□□□ -1.13
COL28A1-202ENST00000430711 LDHBP07195 334 aaKnown RBP7.98□□□□□ -1.13
COL28A1-202ENST00000430711 PYGBP11216 843 aa7.98□□□□□ -1.13
COL28A1-202ENST00000430711 CALML3P27482 149 aa7.98□□□□□ -1.13
COL28A1-202ENST00000430711 KIF5BP33176 963 aa7.98□□□□□ -1.13
COL28A1-202ENST00000430711 APLP1P51693 650 aa7.98□□□□□ -1.13
COL28A1-202ENST00000430711 VAV2P52735 878 aa7.98□□□□□ -1.13
COL28A1-202ENST00000430711 RHBDL3P58872 404 aa7.98□□□□□ -1.13
COL28A1-202ENST00000430711 SNAP25P60880 206 aa7.98□□□□□ -1.13
COL28A1-202ENST00000430711 GPSM2P81274 684 aa7.98□□□□□ -1.13
COL28A1-202ENST00000430711 ZBED6P86452 979 aa7.98□□□□□ -1.13
COL28A1-202ENST00000430711 RASSF7Q02833 373 aa7.98□□□□□ -1.13
COL28A1-202ENST00000430711 TTMPQ5BVD1 217 aa7.98□□□□□ -1.13
COL28A1-202ENST00000430711 SLC10A5Q5PT55 438 aa7.98□□□□□ -1.13
COL28A1-202ENST00000430711 SND1Q7KZF4 910 aaKnown RBP eCLIP7.98□□□□□ -1.13
COL28A1-202ENST00000430711 RRAGAQ7L523 313 aa7.98□□□□□ -1.13
COL28A1-202ENST00000430711 PACS2Q86VP3 889 aa7.98□□□□□ -1.13
COL28A1-202ENST00000430711 DNAJC5GQ8N7S2 189 aa7.98□□□□□ -1.13
COL28A1-202ENST00000430711 DAGLBQ8NCG7 672 aa7.98□□□□□ -1.13
COL28A1-202ENST00000430711 CCDC148Q8NFR7 591 aa7.98□□□□□ -1.13
COL28A1-202ENST00000430711 ARHGEF1Q92888 912 aaKnown RBP7.98□□□□□ -1.13
COL28A1-202ENST00000430711 MTMR9Q96QG7 549 aa7.98□□□□□ -1.13
COL28A1-202ENST00000430711 EIF3CQ99613 913 aaKnown RBP7.98□□□□□ -1.13
COL28A1-202ENST00000430711 C7orf25Q9BPX7 421 aa7.98□□□□□ -1.13
COL28A1-202ENST00000430711 TLR10Q9BXR5 811 aa7.98□□□□□ -1.13
COL28A1-202ENST00000430711 SH2D4AQ9H788 454 aa7.98□□□□□ -1.13
COL28A1-202ENST00000430711 MMRN2Q9H8L6 949 aa7.98□□□□□ -1.13
COL28A1-202ENST00000430711 GPCPD1Q9NPB8 672 aa7.98□□□□□ -1.13
COL28A1-202ENST00000430711 DDX4Q9NQI0 724 aaKnown RBP7.98□□□□□ -1.13
COL28A1-202ENST00000430711 PSD3Q9NYI0 1048 aa7.98□□□□□ -1.13
COL28A1-202ENST00000430711 ANKIB1Q9P2G1 1089 aa7.98□□□□□ -1.13
COL28A1-202ENST00000430711 AJAP1Q9UKB5 411 aaPredicted RBP7.98□□□□□ -1.13
COL28A1-202ENST00000430711 SNX12Q9UMY4 172 aa7.98□□□□□ -1.13
COL28A1-202ENST00000430711 PCDHA13Q9Y5I0 950 aa7.98□□□□□ -1.13
COL28A1-202ENST00000430711 GRIN2DO15399 1336 aa7.98□□□□□ -1.13
COL28A1-202ENST00000430711 SPATA31A5Q5VU36 1347 aa7.98□□□□□ -1.13
COL28A1-202ENST00000430711 SPATA31A7Q8IWB4 1347 aa7.98□□□□□ -1.13
COL28A1-202ENST00000430711 ROBO3Q96MS0 1386 aa7.98□□□□□ -1.13
COL28A1-202ENST00000430711 TRIM37O94972 964 aa7.97□□□□□ -1.13
COL28A1-202ENST00000430711 FTCDO95954 541 aa7.97□□□□□ -1.13
COL28A1-202ENST00000430711 GLI1P08151 1106 aa7.97□□□□□ -1.13
COL28A1-202ENST00000430711 POTEIP0CG38 1075 aa7.97□□□□□ -1.13
COL28A1-202ENST00000430711 STAT3P40763 770 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms