RNA–Protein interactions for RNA: ENST00000430433.5

MRPL55-221, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5 BASIC

Gene MRPL55, Length 864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-221ENST00000430433 CCDC62Q6P9F0 684 aa13.09□□□□□ -0.31
MRPL55-221ENST00000430433 HEATR3Q7Z4Q2 680 aa13.09□□□□□ -0.31
MRPL55-221ENST00000430433 IL31RAQ8NI17 732 aa13.09□□□□□ -0.31
MRPL55-221ENST00000430433 SMARCC2Q8TAQ2 1214 aa13.09□□□□□ -0.31
MRPL55-221ENST00000430433 A6NJR5 290 aa13.08□□□□□ -0.32
MRPL55-221ENST00000430433 KPNA6O60684 536 aa13.08□□□□□ -0.32
MRPL55-221ENST00000430433 CASTP20810 708 aaKnown RBP13.08□□□□□ -0.32
MRPL55-221ENST00000430433 PURAQ00577 322 aaKnown RBP13.08□□□□□ -0.32
MRPL55-221ENST00000430433 LY6KQ17RY6 165 aa13.08□□□□□ -0.32
MRPL55-221ENST00000430433 USP17L6PQ6QN14 398 aa13.08□□□□□ -0.32
MRPL55-221ENST00000430433 Q6ZUG5 572 aa13.08□□□□□ -0.32
MRPL55-221ENST00000430433 VSIG10LQ86VR7 867 aa13.08□□□□□ -0.32
MRPL55-221ENST00000430433 FAM126BQ8IXS8 530 aa13.08□□□□□ -0.32
MRPL55-221ENST00000430433 AFG1LQ8WV93 481 aa13.08□□□□□ -0.32
MRPL55-221ENST00000430433 BRF1Q92994 677 aa13.08□□□□□ -0.32
MRPL55-221ENST00000430433 MTG1Q9BT17 334 aaPredicted RBP13.08□□□□□ -0.32
MRPL55-221ENST00000430433 SEZ6LQ9BYH1 1024 aa13.08□□□□□ -0.32
MRPL55-221ENST00000430433 TBX21Q9UL17 535 aa13.08□□□□□ -0.32
MRPL55-221ENST00000430433 KIAA1217Q5T5P2 1943 aa13.07□□□□□ -0.32
MRPL55-221ENST00000430433 EPB41L2O43491 1005 aaKnown RBP13.07□□□□□ -0.32
MRPL55-221ENST00000430433 RPS6KB1P23443 525 aa13.07□□□□□ -0.32
MRPL55-221ENST00000430433 ITGB8P26012 769 aa13.07□□□□□ -0.32
MRPL55-221ENST00000430433 CHMP4BP1P59074 171 aa13.07□□□□□ -0.32
MRPL55-221ENST00000430433 FPGSQ05932 587 aa13.07□□□□□ -0.32
MRPL55-221ENST00000430433 ARHGAP1Q07960 439 aa13.07□□□□□ -0.32
MRPL55-221ENST00000430433 APOBRQ0VD83 1088 aa13.07□□□□□ -0.32
MRPL55-221ENST00000430433 FAM47CQ5HY64 1035 aa13.07□□□□□ -0.32
MRPL55-221ENST00000430433 KCNV1Q6PIU1 500 aa13.07□□□□□ -0.32
MRPL55-221ENST00000430433 SLC43A3Q8NBI5 491 aa13.07□□□□□ -0.32
MRPL55-221ENST00000430433 GPKOWQ92917 476 aaPredicted RBP eCLIP13.07□□□□□ -0.32
MRPL55-221ENST00000430433 PSTPIP2Q9H939 334 aa13.07□□□□□ -0.32
MRPL55-221ENST00000430433 DDX41Q9UJV9 622 aaKnown RBP13.07□□□□□ -0.32
MRPL55-221ENST00000430433 GRIN2DO15399 1336 aa13.07□□□□□ -0.32
MRPL55-221ENST00000430433 CNTNAP5Q8WYK1 1306 aa13.07□□□□□ -0.32
MRPL55-221ENST00000430433 CCDC196A0A1B0GTZ2 297 aa13.06□□□□□ -0.32
MRPL55-221ENST00000430433 PIK3CDO00329 1044 aa13.06□□□□□ -0.32
MRPL55-221ENST00000430433 SOX1O00570 391 aaPredicted RBP13.06□□□□□ -0.32
MRPL55-221ENST00000430433 TIMP1P01033 207 aa13.06□□□□□ -0.32
MRPL55-221ENST00000430433 METAP2P50579 478 aaKnown RBP eCLIP13.06□□□□□ -0.32
MRPL55-221ENST00000430433 RCAN1P53805 252 aa13.06□□□□□ -0.32
MRPL55-221ENST00000430433 LAMC2Q13753 1193 aa13.06□□□□□ -0.32
MRPL55-221ENST00000430433 DHX37Q8IY37 1157 aaKnown RBP13.06□□□□□ -0.32
MRPL55-221ENST00000430433 ZFP91Q96JP5 570 aaPredicted RBP13.06□□□□□ -0.32
MRPL55-221ENST00000430433 PPP1R12CQ9BZL4 782 aa13.06□□□□□ -0.32
MRPL55-221ENST00000430433 TRPV6Q9H1D0 765 aa13.06□□□□□ -0.32
MRPL55-221ENST00000430433 MEIS2O14770 477 aa13.05□□□□□ -0.32
MRPL55-221ENST00000430433 SORBS3O60504 671 aa13.05□□□□□ -0.32
MRPL55-221ENST00000430433 RGS20O76081 388 aa13.05□□□□□ -0.32
MRPL55-221ENST00000430433 CD4P01730 458 aa13.05□□□□□ -0.32
MRPL55-221ENST00000430433 MMP3P08254 477 aa13.05□□□□□ -0.32
MRPL55-221ENST00000430433 NAPAP54920 295 aa13.05□□□□□ -0.32
MRPL55-221ENST00000430433 DGKDQ16760 1214 aa13.05□□□□□ -0.32
MRPL55-221ENST00000430433 LRIT3Q3SXY7 679 aa13.05□□□□□ -0.32
MRPL55-221ENST00000430433 GNPTABQ3T906 1256 aa13.05□□□□□ -0.32
MRPL55-221ENST00000430433 WWC2Q6AWC2 1192 aa13.05□□□□□ -0.32
MRPL55-221ENST00000430433 EMID1Q96A84 441 aaPredicted RBP13.05□□□□□ -0.32
MRPL55-221ENST00000430433 LRCH3Q96II8 777 aa13.05□□□□□ -0.32
MRPL55-221ENST00000430433 USP26Q9BXU7 913 aa13.05□□□□□ -0.32
MRPL55-221ENST00000430433 ALDH8A1Q9H2A2 487 aaPredicted RBP13.05□□□□□ -0.32
MRPL55-221ENST00000430433 V9GY48 417 aaPredicted RBP13.05□□□□□ -0.32
MRPL55-221ENST00000430433 FRMPD4Q14CM0 1322 aa13.05□□□□□ -0.32
MRPL55-221ENST00000430433 SPDYE3A6NKU9 549 aa13.04□□□□□ -0.32
MRPL55-221ENST00000430433 B4GALT4O60513 344 aa13.04□□□□□ -0.32
MRPL55-221ENST00000430433 STAM2O75886 525 aa13.04□□□□□ -0.32
MRPL55-221ENST00000430433 GGPS1O95749 300 aa13.04□□□□□ -0.32
MRPL55-221ENST00000430433 TGFB3P10600 412 aa13.04□□□□□ -0.32
MRPL55-221ENST00000430433 UBA1P22314 1058 aaKnown RBP13.04□□□□□ -0.32
MRPL55-221ENST00000430433 CDC27P30260 824 aa13.04□□□□□ -0.32
MRPL55-221ENST00000430433 FUT2Q10981 343 aa13.04□□□□□ -0.32
MRPL55-221ENST00000430433 SHHQ15465 462 aa13.04□□□□□ -0.32
MRPL55-221ENST00000430433 UBE2SQ16763 222 aa13.04□□□□□ -0.32
MRPL55-221ENST00000430433 NBPF20Q3BBV1 942 aa13.04□□□□□ -0.32
MRPL55-221ENST00000430433 C9orf50Q5SZB4 431 aa13.04□□□□□ -0.32
MRPL55-221ENST00000430433 MFSD5Q6N075 450 aa13.04□□□□□ -0.32
MRPL55-221ENST00000430433 PPP1R18Q6NYC8 613 aa13.04□□□□□ -0.32
MRPL55-221ENST00000430433 XRRA1Q6P2D8 792 aa13.04□□□□□ -0.32
MRPL55-221ENST00000430433 RUFY3Q7L099 469 aa13.04□□□□□ -0.32
MRPL55-221ENST00000430433 TMEM199Q8N511 208 aa13.04□□□□□ -0.32
MRPL55-221ENST00000430433 PPTC7Q8NI37 304 aa13.04□□□□□ -0.32
MRPL55-221ENST00000430433 SPATA33Q96N06 139 aa13.04□□□□□ -0.32
MRPL55-221ENST00000430433 HIPK3Q9H422 1215 aa13.04□□□□□ -0.32
MRPL55-221ENST00000430433 EHMT1Q9H9B1 1298 aa13.04□□□□□ -0.32
MRPL55-221ENST00000430433 FAM217BQ9NTX9 383 aaPredicted RBP13.04□□□□□ -0.32
MRPL55-221ENST00000430433 RTEL1Q9NZ71 1219 aa13.04□□□□□ -0.32
MRPL55-221ENST00000430433 CYP46A1Q9Y6A2 500 aa13.04□□□□□ -0.32
MRPL55-221ENST00000430433 hCG_1984214I3L0E3 225 aa13.03□□□□□ -0.32
MRPL55-221ENST00000430433 SUPT20HL2P0C7V6 817 aa13.03□□□□□ -0.32
MRPL55-221ENST00000430433 CYP2C18P33260 490 aa13.03□□□□□ -0.32
MRPL55-221ENST00000430433 ADD1P35611 737 aaKnown RBP13.03□□□□□ -0.32
MRPL55-221ENST00000430433 ADCY7P51828 1080 aa13.03□□□□□ -0.32
MRPL55-221ENST00000430433 EPHB4P54760 987 aa13.03□□□□□ -0.32
MRPL55-221ENST00000430433 MRPS9P82933 396 aaKnown RBP13.03□□□□□ -0.32
MRPL55-221ENST00000430433 PPIGQ13427 754 aaKnown RBP eCLIP13.03□□□□□ -0.326e-7■■■■□ 20.4
MRPL55-221ENST00000430433 CELF3Q5SZQ8 465 aaKnown RBP13.03□□□□□ -0.32
MRPL55-221ENST00000430433 PCNX4Q63HM2 1172 aa13.03□□□□□ -0.32
MRPL55-221ENST00000430433 NFRKBQ6P4R8 1299 aa13.03□□□□□ -0.32
MRPL55-221ENST00000430433 FBXL16Q8N461 479 aa13.03□□□□□ -0.32
MRPL55-221ENST00000430433 ZNF713Q8N859 430 aaPredicted RBP13.03□□□□□ -0.32
MRPL55-221ENST00000430433 PPP1R13LQ8WUF5 828 aa13.03□□□□□ -0.32
MRPL55-221ENST00000430433 RNPC3Q96LT9 517 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms