RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 LTBP4Q8N2S1 1624 aa14.79□□□□□ -0.04
SNRNP200-202ENST00000429650 PDIA5Q14554 519 aa14.79□□□□□ -0.04
SNRNP200-202ENST00000429650 ZSCAN26Q16670 478 aa14.79□□□□□ -0.04
SNRNP200-202ENST00000429650 CRY2Q49AN0 593 aa14.79□□□□□ -0.04
SNRNP200-202ENST00000429650 C2CD5Q86YS7 1000 aa14.79□□□□□ -0.04
SNRNP200-202ENST00000429650 CAGE1Q8TC20 777 aa14.79□□□□□ -0.04
SNRNP200-202ENST00000429650 CERKQ8TCT0 537 aa14.79□□□□□ -0.04
SNRNP200-202ENST00000429650 SNX29Q8TEQ0 813 aa14.79□□□□□ -0.04
SNRNP200-202ENST00000429650 NGLY1Q96IV0 654 aa14.79□□□□□ -0.04
SNRNP200-202ENST00000429650 RAB34Q9BZG1 259 aa14.79□□□□□ -0.04
SNRNP200-202ENST00000429650 ACBD3Q9H3P7 528 aa14.79□□□□□ -0.04
SNRNP200-202ENST00000429650 VIPAS39Q9H9C1 493 aa14.79□□□□□ -0.04
SNRNP200-202ENST00000429650 FGFR1OPO95684 399 aaKnown RBP14.79□□□□□ -0.04
SNRNP200-202ENST00000429650 SNHG28P0DPA3 235 aa14.79□□□□□ -0.04
SNRNP200-202ENST00000429650 LRRC63Q05C16 580 aa14.79□□□□□ -0.04
SNRNP200-202ENST00000429650 EHHADHQ08426 723 aa14.79□□□□□ -0.04
SNRNP200-202ENST00000429650 CCDC96Q2M329 555 aa14.79□□□□□ -0.04
SNRNP200-202ENST00000429650 MAP9Q49MG5 647 aa14.79□□□□□ -0.04
SNRNP200-202ENST00000429650 HSP90B2PQ58FF3 399 aa14.79□□□□□ -0.04
SNRNP200-202ENST00000429650 LRRC55Q6ZSA7 311 aa14.79□□□□□ -0.04
SNRNP200-202ENST00000429650 FAM196AQ6ZSG2 479 aa14.79□□□□□ -0.04
SNRNP200-202ENST00000429650 IFIH1Q9BYX4 1025 aaKnown RBP14.79□□□□□ -0.04
SNRNP200-202ENST00000429650 JADE2Q9NQC1 790 aa14.79□□□□□ -0.04
SNRNP200-202ENST00000429650 MYH10P35580 1976 aa14.78□□□□□ -0.04
SNRNP200-202ENST00000429650 USO1O60763 962 aaKnown RBP14.78□□□□□ -0.04
SNRNP200-202ENST00000429650 KIF11P52732 1056 aa14.78□□□□□ -0.04
SNRNP200-202ENST00000429650 GABPAQ06546 454 aa14.78□□□□□ -0.04
SNRNP200-202ENST00000429650 TMEM119Q4V9L6 283 aa14.78□□□□□ -0.04
SNRNP200-202ENST00000429650 KRT79Q5XKE5 535 aa14.78□□□□□ -0.04
SNRNP200-202ENST00000429650 KCNK18Q7Z418 384 aa14.78□□□□□ -0.04
SNRNP200-202ENST00000429650 FNBP4Q8N3X1 1017 aaPredicted RBP14.78□□□□□ -0.04
SNRNP200-202ENST00000429650 TRIM58Q8NG06 486 aa14.78□□□□□ -0.04
SNRNP200-202ENST00000429650 SMCR8Q8TEV9 937 aaPredicted RBP14.78□□□□□ -0.04
SNRNP200-202ENST00000429650 TBC1D22AQ8WUA7 517 aa14.78□□□□□ -0.04
SNRNP200-202ENST00000429650 SH2D4AQ9H788 454 aa14.78□□□□□ -0.04
SNRNP200-202ENST00000429650 MMRN2Q9H8L6 949 aa14.78□□□□□ -0.04
SNRNP200-202ENST00000429650 MED4Q9NPJ6 270 aa14.78□□□□□ -0.04
SNRNP200-202ENST00000429650 DAGLAQ9Y4D2 1042 aa14.78□□□□□ -0.04
SNRNP200-202ENST00000429650 PCDHA13Q9Y5I0 950 aa14.78□□□□□ -0.04
SNRNP200-202ENST00000429650 LCA5LO95447 670 aa14.78□□□□□ -0.04
SNRNP200-202ENST00000429650 AKR1B1P15121 316 aa14.78□□□□□ -0.04
SNRNP200-202ENST00000429650 CCDC84Q86UT8 332 aaPredicted RBP14.78□□□□□ -0.04
SNRNP200-202ENST00000429650 DDX12PQ92771 950 aa14.78□□□□□ -0.04
SNRNP200-202ENST00000429650 GPCPD1Q9NPB8 672 aa14.78□□□□□ -0.04
SNRNP200-202ENST00000429650 POLLQ9UGP5 575 aa14.78□□□□□ -0.04
SNRNP200-202ENST00000429650 JRKLQ9Y4A0 524 aa14.78□□□□□ -0.04
SNRNP200-202ENST00000429650 CAPN6Q9Y6Q1 641 aa14.78□□□□□ -0.04
SNRNP200-202ENST00000429650 IGKV6D-41A0A0C4DH26 115 aa14.77□□□□□ -0.04
SNRNP200-202ENST00000429650 EIF4A3P38919 411 aaKnown RBP14.77□□□□□ -0.04
SNRNP200-202ENST00000429650 EIF6P56537 245 aaKnown RBP14.77□□□□□ -0.04
SNRNP200-202ENST00000429650 CLEC10AQ8IUN9 316 aa14.77□□□□□ -0.04
SNRNP200-202ENST00000429650 GLIS3Q8NEA6 775 aa14.77□□□□□ -0.04
SNRNP200-202ENST00000429650 GOLGA5Q8TBA6 731 aa14.77□□□□□ -0.04
SNRNP200-202ENST00000429650 SNX12Q9UMY4 172 aa14.77□□□□□ -0.04
SNRNP200-202ENST00000429650 LRRC53A6NM62 1247 aa14.77□□□□□ -0.05
SNRNP200-202ENST00000429650 TACC1O75410 805 aa14.77□□□□□ -0.05
SNRNP200-202ENST00000429650 TNNT3P45378 269 aaPredicted RBP14.77□□□□□ -0.05
SNRNP200-202ENST00000429650 TNNI2P48788 182 aa14.77□□□□□ -0.05
SNRNP200-202ENST00000429650 AARSP49588 968 aaKnown RBP eCLIP14.77□□□□□ -0.05
SNRNP200-202ENST00000429650 PICALMQ13492 652 aa14.77□□□□□ -0.05
SNRNP200-202ENST00000429650 ECM1Q16610 540 aa14.77□□□□□ -0.05
SNRNP200-202ENST00000429650 PPP4R3AQ6IN85 833 aa14.77□□□□□ -0.05
SNRNP200-202ENST00000429650 TBC1D16Q8TBP0 767 aa14.77□□□□□ -0.05
SNRNP200-202ENST00000429650 BAP1Q92560 729 aa14.77□□□□□ -0.05
SNRNP200-202ENST00000429650 MLXIPQ9HAP2 919 aa14.77□□□□□ -0.05
SNRNP200-202ENST00000429650 RIC8AQ9NPQ8 531 aa14.77□□□□□ -0.05
SNRNP200-202ENST00000429650 PHACTR2O75167 634 aa14.76□□□□□ -0.05
SNRNP200-202ENST00000429650 ZMYND10O75800 440 aa14.76□□□□□ -0.05
SNRNP200-202ENST00000429650 HOXA7P31268 230 aaPredicted RBP14.76□□□□□ -0.05
SNRNP200-202ENST00000429650 ACTN2P35609 894 aa14.76□□□□□ -0.05
SNRNP200-202ENST00000429650 C2orf54Q08AI8 447 aa14.76□□□□□ -0.05
SNRNP200-202ENST00000429650 PSMD2Q13200 908 aa14.76□□□□□ -0.05
SNRNP200-202ENST00000429650 LRRC41Q15345 812 aa14.76□□□□□ -0.05
SNRNP200-202ENST00000429650 UBE2SQ16763 222 aa14.76□□□□□ -0.05
SNRNP200-202ENST00000429650 PPP1R18Q6NYC8 613 aa14.76□□□□□ -0.05
SNRNP200-202ENST00000429650 DPP8Q6V1X1 898 aaPredicted RBP14.76□□□□□ -0.05
SNRNP200-202ENST00000429650 RRAGAQ7L523 313 aa14.76□□□□□ -0.05
SNRNP200-202ENST00000429650 CREG2Q8IUH2 290 aa14.76□□□□□ -0.05
SNRNP200-202ENST00000429650 RBM17Q96I25 401 aaKnown RBP14.76□□□□□ -0.05
SNRNP200-202ENST00000429650 LRRC27Q9C0I9 530 aa14.76□□□□□ -0.05
SNRNP200-202ENST00000429650 DEF6Q9H4E7 631 aa14.76□□□□□ -0.05
SNRNP200-202ENST00000429650 JMJD4Q9H9V9 463 aa14.76□□□□□ -0.05
SNRNP200-202ENST00000429650 HPCAL4Q9UM19 191 aa14.76□□□□□ -0.05
SNRNP200-202ENST00000429650 MYH7BA7E2Y1 1941 aa14.76□□□□□ -0.05
SNRNP200-202ENST00000429650 PNMA6FA0A0J9YX94 578 aa14.76□□□□□ -0.05
SNRNP200-202ENST00000429650 PPP1R11O60927 126 aaPredicted RBP14.76□□□□□ -0.05
SNRNP200-202ENST00000429650 CLK2P49760 499 aaKnown RBP14.76□□□□□ -0.05
SNRNP200-202ENST00000429650 ZNF543Q08ER8 600 aa14.76□□□□□ -0.05
SNRNP200-202ENST00000429650 IQCEQ6IPM2 695 aa14.76□□□□□ -0.05
SNRNP200-202ENST00000429650 FOXR2Q6PJQ5 311 aa14.76□□□□□ -0.05
SNRNP200-202ENST00000429650 COG1Q8WTW3 980 aa14.76□□□□□ -0.05
SNRNP200-202ENST00000429650 ZC3H4Q9UPT8 1303 aaKnown RBP14.76□□□□□ -0.05
SNRNP200-202ENST00000429650 TULP2O00295 520 aa14.75□□□□□ -0.05
SNRNP200-202ENST00000429650 AKR1B10O60218 316 aa14.75□□□□□ -0.05
SNRNP200-202ENST00000429650 MOCS3O95396 460 aa14.75□□□□□ -0.05
SNRNP200-202ENST00000429650 SYF2O95926 243 aaKnown RBP14.75□□□□□ -0.05
SNRNP200-202ENST00000429650 MYBL2P10244 700 aa14.75□□□□□ -0.05
SNRNP200-202ENST00000429650 CAPN2P17655 700 aa14.75□□□□□ -0.05
SNRNP200-202ENST00000429650 ERCC3P19447 782 aa14.75□□□□□ -0.05
SNRNP200-202ENST00000429650 ATP2B2Q01814 1243 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms