RNA–Protein interactions for RNA: ENST00000429602.6

SIMC1-203, Transcript of SUMO interacting motifs containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIMC1, Length 2,694 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1-203ENST00000429602 GBP3Q9H0R5 595 aa22.34■■□□□ 1.17
SIMC1-203ENST00000429602 TAF1LQ8IZX4 1826 aa22.34■■□□□ 1.17
SIMC1-203ENST00000429602 IGKV6D-41A0A0C4DH26 115 aa22.34■■□□□ 1.17
SIMC1-203ENST00000429602 TTLL1O95922 423 aa22.34■■□□□ 1.17
SIMC1-203ENST00000429602 DDR1Q08345 913 aa22.34■■□□□ 1.17
SIMC1-203ENST00000429602 GPS2Q13227 327 aa22.34■■□□□ 1.17
SIMC1-203ENST00000429602 SECISBP2LQ93073 1101 aaKnown RBP22.34■■□□□ 1.17
SIMC1-203ENST00000429602 SERPINB13Q9UIV8 391 aa22.34■■□□□ 1.17
SIMC1-203ENST00000429602 PLIN4Q96Q06 1357 aa22.33■■□□□ 1.17
SIMC1-203ENST00000429602 PNMA6FA0A0J9YX94 578 aa22.33■■□□□ 1.17
SIMC1-203ENST00000429602 PHACTR2O75167 634 aa22.33■■□□□ 1.17
SIMC1-203ENST00000429602 EIF3JO75822 258 aaKnown RBP22.33■■□□□ 1.17
SIMC1-203ENST00000429602 SSBP05455 408 aaKnown RBP eCLIP22.33■■□□□ 1.17
SIMC1-203ENST00000429602 PDIA5Q14554 519 aa22.33■■□□□ 1.17
SIMC1-203ENST00000429602 MAN2A1Q16706 1144 aa22.33■■□□□ 1.17
SIMC1-203ENST00000429602 LRRC55Q6ZSA7 311 aa22.33■■□□□ 1.17
SIMC1-203ENST00000429602 HAS1Q92839 578 aa22.33■■□□□ 1.17
SIMC1-203ENST00000429602 PURBQ96QR8 312 aaKnown RBP22.33■■□□□ 1.17
SIMC1-203ENST00000429602 IFIH1Q9BYX4 1025 aaKnown RBP22.33■■□□□ 1.17
SIMC1-203ENST00000429602 MLXIPQ9HAP2 919 aa22.33■■□□□ 1.17
SIMC1-203ENST00000429602 RIC8AQ9NPQ8 531 aa22.33■■□□□ 1.17
SIMC1-203ENST00000429602 DDX25Q9UHL0 483 aaKnown RBP22.33■■□□□ 1.17
SIMC1-203ENST00000429602 CAPN6Q9Y6Q1 641 aa22.33■■□□□ 1.17
SIMC1-203ENST00000429602 USP17L10C9JJH3 530 aa22.33■■□□□ 1.16
SIMC1-203ENST00000429602 MPHOSPH10O00566 681 aaKnown RBP22.33■■□□□ 1.16
SIMC1-203ENST00000429602 EIF4A3P38919 411 aaKnown RBP22.33■■□□□ 1.16
SIMC1-203ENST00000429602 LMAN1P49257 510 aa22.33■■□□□ 1.16
SIMC1-203ENST00000429602 CDK17Q00537 523 aa22.33■■□□□ 1.16
SIMC1-203ENST00000429602 RRAGAQ7L523 313 aa22.33■■□□□ 1.16
SIMC1-203ENST00000429602 CCDC102AQ96A19 550 aa22.33■■□□□ 1.16
SIMC1-203ENST00000429602 GDAP1L1Q96MZ0 367 aa22.33■■□□□ 1.16
SIMC1-203ENST00000429602 LRRC53A6NM62 1247 aa22.32■■□□□ 1.16
SIMC1-203ENST00000429602 RAD21O60216 631 aa22.32■■□□□ 1.16
SIMC1-203ENST00000429602 MARCH6O60337 910 aa22.32■■□□□ 1.16
SIMC1-203ENST00000429602 ADRA2BP18089 450 aa22.32■■□□□ 1.16
SIMC1-203ENST00000429602 KIF11P52732 1056 aa22.32■■□□□ 1.16
SIMC1-203ENST00000429602 TAF3Q5VWG9 929 aa22.32■■□□□ 1.16
SIMC1-203ENST00000429602 HINFPQ9BQA5 517 aa22.32■■□□□ 1.16
SIMC1-203ENST00000429602 DEF6Q9H4E7 631 aa22.32■■□□□ 1.16
SIMC1-203ENST00000429602 TBC1D7Q9P0N9 293 aa22.32■■□□□ 1.16
SIMC1-203ENST00000429602 FAN1Q9Y2M0 1017 aa22.32■■□□□ 1.16
SIMC1-203ENST00000429602 TMEM119Q4V9L6 283 aa22.32■■□□□ 1.16
SIMC1-203ENST00000429602 TANGO6Q9C0B7 1094 aa22.32■■□□□ 1.16
SIMC1-203ENST00000429602 USP40Q9NVE5 1235 aa22.32■■□□□ 1.16
SIMC1-203ENST00000429602 PCDHA13Q9Y5I0 950 aa22.31■■□□□ 1.16
SIMC1-203ENST00000429602 TUBBP07437 444 aa22.31■■□□□ 1.16
SIMC1-203ENST00000429602 HNRNPH3P31942 346 aaKnown RBP22.31■■□□□ 1.16
SIMC1-203ENST00000429602 SHMT1P34896 483 aa22.31■■□□□ 1.16
SIMC1-203ENST00000429602 LRRC63Q05C16 580 aa22.31■■□□□ 1.16
SIMC1-203ENST00000429602 TXLNBQ8N3L3 684 aa22.31■■□□□ 1.16
SIMC1-203ENST00000429602 FGFBP2Q9BYJ0 223 aa22.31■■□□□ 1.16
SIMC1-203ENST00000429602 AKR1B10O60218 316 aa22.3■■□□□ 1.16
SIMC1-203ENST00000429602 HOXA10P31260 410 aaPredicted RBP22.3■■□□□ 1.16
SIMC1-203ENST00000429602 CKAP4Q07065 602 aaKnown RBP22.3■■□□□ 1.16
SIMC1-203ENST00000429602 EHHADHQ08426 723 aa22.3■■□□□ 1.16
SIMC1-203ENST00000429602 C2orf54Q08AI8 447 aa22.3■■□□□ 1.16
SIMC1-203ENST00000429602 GSPT2Q8IYD1 628 aaKnown RBP22.3■■□□□ 1.16
SIMC1-203ENST00000429602 CUL5Q93034 780 aa22.3■■□□□ 1.16
SIMC1-203ENST00000429602 CALCOCO1Q9P1Z2 691 aa22.3■■□□□ 1.16
SIMC1-203ENST00000429602 ANO9A1A5B4 782 aa22.3■■□□□ 1.16
SIMC1-203ENST00000429602 MOCS3O95396 460 aa22.3■■□□□ 1.16
SIMC1-203ENST00000429602 TNNT3P45378 269 aaPredicted RBP22.3■■□□□ 1.16
SIMC1-203ENST00000429602 CACNB1Q02641 598 aaPredicted RBP22.3■■□□□ 1.16
SIMC1-203ENST00000429602 PPP4R3AQ6IN85 833 aa22.3■■□□□ 1.16
SIMC1-203ENST00000429602 CCDC84Q86UT8 332 aaPredicted RBP22.3■■□□□ 1.16
SIMC1-203ENST00000429602 ANKRD13CQ8N6S4 541 aa22.3■■□□□ 1.16
SIMC1-203ENST00000429602 EXOC4Q96A65 974 aa22.3■■□□□ 1.16
SIMC1-203ENST00000429602 DNAJC19Q96DA6 116 aa22.3■■□□□ 1.16
SIMC1-203ENST00000429602 PSMB7Q99436 277 aa22.3■■□□□ 1.16
SIMC1-203ENST00000429602 GOLGB1Q14789 3259 aaKnown RBP22.29■■□□□ 1.16
SIMC1-203ENST00000429602 CLK2P49760 499 aaKnown RBP22.29■■□□□ 1.16
SIMC1-203ENST00000429602 COASYQ13057 564 aa22.29■■□□□ 1.16
SIMC1-203ENST00000429602 DOK7Q18PE1 504 aa22.29■■□□□ 1.16
SIMC1-203ENST00000429602 PSTPIP2Q9H939 334 aa22.29■■□□□ 1.16
SIMC1-203ENST00000429602 PCDHA12Q9UN75 941 aa22.29■■□□□ 1.16
SIMC1-203ENST00000429602 USP17L15C9J2P7 530 aa22.29■■□□□ 1.16
SIMC1-203ENST00000429602 USP17L13C9JLJ4 530 aa22.29■■□□□ 1.16
SIMC1-203ENST00000429602 USP17L11C9JVI0 530 aa22.29■■□□□ 1.16
SIMC1-203ENST00000429602 USP17L18D6R9N7 530 aa22.29■■□□□ 1.16
SIMC1-203ENST00000429602 USP17L22D6RA61 530 aa22.29■■□□□ 1.16
SIMC1-203ENST00000429602 USP17L17D6RBQ6 530 aa22.29■■□□□ 1.16
SIMC1-203ENST00000429602 USP17L19D6RCP7 530 aa22.29■■□□□ 1.16
SIMC1-203ENST00000429602 USP17L20D6RJB6 530 aa22.29■■□□□ 1.16
SIMC1-203ENST00000429602 FGFR1OPO95684 399 aaKnown RBP22.29■■□□□ 1.16
SIMC1-203ENST00000429602 RAD51AP2Q09MP3 1159 aa22.29■■□□□ 1.16
SIMC1-203ENST00000429602 USP17L24Q0WX57 530 aa22.29■■□□□ 1.16
SIMC1-203ENST00000429602 USP17L6PQ6QN14 398 aa22.29■■□□□ 1.16
SIMC1-203ENST00000429602 MYOCDQ8IZQ8 938 aa22.29■■□□□ 1.16
SIMC1-203ENST00000429602 BAP1Q92560 729 aa22.29■■□□□ 1.16
SIMC1-203ENST00000429602 SH2D4AQ9H788 454 aa22.29■■□□□ 1.16
SIMC1-203ENST00000429602 KANSL2Q9H9L4 492 aa22.29■■□□□ 1.16
SIMC1-203ENST00000429602 E9PMD0 336 aa22.28■■□□□ 1.16
SIMC1-203ENST00000429602 PPEF1O14829 653 aaPredicted RBP22.28■■□□□ 1.16
SIMC1-203ENST00000429602 USO1O60763 962 aaKnown RBP22.28■■□□□ 1.16
SIMC1-203ENST00000429602 NFIAQ12857 509 aa22.28■■□□□ 1.16
SIMC1-203ENST00000429602 SHROOM1Q2M3G4 852 aaPredicted RBP22.28■■□□□ 1.16
SIMC1-203ENST00000429602 TSGA10Q9BZW7 698 aa22.28■■□□□ 1.16
SIMC1-203ENST00000429602 NLRC4Q9NPP4 1024 aa22.28■■□□□ 1.16
SIMC1-203ENST00000429602 FAM196BA6NMK8 535 aa22.28■■□□□ 1.16
SIMC1-203ENST00000429602 UBAP1LF5GYI3 381 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms